##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2936000.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1216929 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09454372440791 33.0 31.0 34.0 30.0 34.0 2 32.23653968308751 34.0 31.0 34.0 30.0 34.0 3 32.09459878102995 33.0 31.0 34.0 30.0 34.0 4 35.782495116806324 37.0 35.0 37.0 35.0 37.0 5 31.99349838815576 37.0 35.0 37.0 0.0 37.0 6 33.82948881980789 37.0 35.0 37.0 17.0 37.0 7 35.51291653005229 37.0 35.0 37.0 32.0 37.0 8 35.78076863974809 37.0 35.0 37.0 35.0 37.0 9 37.758173237715596 39.0 38.0 39.0 35.0 39.0 10 37.3923630713049 39.0 37.0 39.0 34.0 39.0 11 37.35230157223634 39.0 37.0 39.0 34.0 39.0 12 37.306099205458985 39.0 37.0 39.0 34.0 39.0 13 37.26151320249579 39.0 37.0 39.0 34.0 39.0 14 38.49422932644386 40.0 38.0 41.0 34.0 41.0 15 38.63038599622492 40.0 38.0 41.0 34.0 41.0 16 38.5803263789424 40.0 38.0 41.0 34.0 41.0 17 38.55757977663446 40.0 38.0 41.0 34.0 41.0 18 38.369979678354284 40.0 38.0 41.0 34.0 41.0 19 38.1105126100208 40.0 37.0 41.0 34.0 41.0 20 38.04944988573697 40.0 36.0 41.0 34.0 41.0 21 37.95551424939335 40.0 36.0 41.0 34.0 41.0 22 38.00910324267069 40.0 35.0 41.0 34.0 41.0 23 38.017656740861625 40.0 35.0 41.0 34.0 41.0 24 37.959662396080624 40.0 35.0 41.0 34.0 41.0 25 37.70031283665686 40.0 35.0 41.0 33.0 41.0 26 37.73351444496762 40.0 35.0 41.0 34.0 41.0 27 37.715130463650716 40.0 35.0 41.0 34.0 41.0 28 37.60534920278833 40.0 35.0 41.0 33.0 41.0 29 37.51610488368672 40.0 35.0 41.0 33.0 41.0 30 37.292768929000786 40.0 35.0 41.0 33.0 41.0 31 37.169742030964834 40.0 35.0 41.0 33.0 41.0 32 36.914959705948334 40.0 35.0 41.0 32.0 41.0 33 36.621285218776116 40.0 35.0 41.0 31.0 41.0 34 36.30468992028294 40.0 35.0 41.0 30.0 41.0 35 36.15266461724554 40.0 35.0 41.0 29.0 41.0 36 35.98717180706516 39.0 35.0 41.0 27.0 41.0 37 35.91801986804489 39.0 35.0 41.0 27.0 41.0 38 35.74403765544251 39.0 35.0 41.0 26.0 41.0 39 35.64599413770237 39.0 35.0 41.0 25.0 41.0 40 35.551331260903474 39.0 35.0 41.0 25.0 41.0 41 35.415802400961766 39.0 35.0 41.0 24.0 41.0 42 35.39436318799207 39.0 35.0 41.0 24.0 41.0 43 35.30422645856907 39.0 35.0 41.0 23.0 41.0 44 35.242490728711374 39.0 35.0 41.0 23.0 41.0 45 35.19746755973438 39.0 35.0 41.0 23.0 41.0 46 35.077770354720776 38.0 35.0 41.0 23.0 41.0 47 35.01029558832109 38.0 35.0 41.0 23.0 41.0 48 34.96130587733549 38.0 35.0 41.0 23.0 41.0 49 34.90215534349169 38.0 35.0 41.0 23.0 41.0 50 34.794608395395294 38.0 34.0 40.0 23.0 41.0 51 33.885959657465634 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 24.0 9 44.0 10 56.0 11 34.0 12 35.0 13 34.0 14 46.0 15 70.0 16 105.0 17 231.0 18 487.0 19 815.0 20 1498.0 21 2454.0 22 3994.0 23 5865.0 24 9515.0 25 15233.0 26 20904.0 27 23102.0 28 21619.0 29 20439.0 30 20801.0 31 23859.0 32 29661.0 33 41989.0 34 69449.0 35 87830.0 36 92013.0 37 136345.0 38 220044.0 39 368024.0 40 306.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.779019153952284 17.514579733082208 20.979366914585814 19.72703419837969 2 37.96302002828431 22.46926484618248 22.750217966701427 16.81749715883178 3 29.852522209594806 23.042100237565215 31.49846868634078 15.606908866499197 4 25.39400408733788 23.837216468668263 32.771755788546415 17.997023655447443 5 21.395742890505527 35.31726173014202 27.5264210155235 15.76057436382895 6 23.28360980796743 32.24814266074685 30.352633555449827 14.115613975835895 7 74.34961283690339 5.242458680826901 16.265369631260327 4.142558851009385 8 75.91954830561191 5.312881852597809 14.930287633871819 3.8372822079184568 9 70.55563636005058 6.156398606656592 16.957932632059883 6.330032401232939 10 37.09123539664188 24.56396387956898 23.602609519536472 14.742191204252672 11 28.0617028602326 24.46765587803397 30.20932199002571 17.261319271707716 12 24.087354315658512 22.123805086410137 34.635627879687306 19.15321271824404 13 23.151227392888163 22.60320856845387 36.443457260037356 17.80210677862061 14 19.828436991804782 24.961028950744048 35.80619740346396 19.404336653987208 15 19.40647317961853 23.370467792286977 38.00566836684802 19.217390661246466 16 23.06987507077241 23.654790049378395 34.27874592519367 18.99658895465553 17 22.929932641920768 23.876824366910476 33.375077757206874 19.81816523396188 18 24.498799847813636 22.279689283433957 33.814955515071134 19.406555353681274 19 22.600003780006887 25.301229570500826 32.17246034896037 19.926306300531913 20 24.040925970208615 24.903507106823817 32.38800291553574 18.66756400743182 21 23.105785136191184 25.755734311533374 33.3524798899525 17.786000662322945 22 22.896980842760755 22.573708079929066 34.08629427024913 20.443016807061053 23 21.1447011288251 25.32949744808448 33.411480867002105 20.114320556088316 24 20.999746082146125 24.148245296151213 34.28244375801711 20.569564863685557 25 21.507746138024487 26.040138742687535 32.457357824491 19.994757294796987 26 20.65379327799732 24.974176800782956 32.901755155806136 21.470274765413595 27 21.21775387060379 24.09220258536036 33.26677234251135 21.423271201524493 28 19.931483266484733 25.79016524382277 33.42619002423313 20.852161465459364 29 21.123418046574617 25.179447609515428 32.89633166766508 20.800802676244874 30 21.525249213388783 24.775726439258168 33.11516119675018 20.58386315060287 31 22.20573262696509 25.69706203073474 30.684534594869543 21.412670747430624 32 21.63371897620979 26.206048175366025 31.169115042866103 20.99111780555809 33 21.529686612776917 26.029127418279952 29.850385683963488 22.59080028497965 34 19.85958096158445 27.770313633745268 31.051770481268832 21.318334923401448 35 20.34794141646719 27.485580506340142 29.812421266976134 22.354056810216537 36 20.697838575627667 29.34928824935555 29.073183398538454 20.879689776478333 37 20.49223907064422 27.994977521285136 29.123556099000027 22.38922730907062 38 20.43537461922594 28.3950830327817 28.942444464714047 22.22709788327832 39 21.16894247733434 26.64551506291657 29.326443859912942 22.859098599836145 40 22.60937162315961 25.99872301506497 29.807983867588 21.583921494187415 41 19.889656668548454 26.890311595828514 29.997970300650245 23.222061434972787 42 21.26681178606147 26.286085712477885 30.393720586821416 22.05338191463923 43 21.051762263862557 25.704046826067913 30.580337883311188 22.66385302675834 44 21.387936354544923 25.8549184052644 29.968305463999954 22.788839776190724 45 21.0796192711325 25.474123798512483 29.55562732090368 23.890629609451334 46 21.377828944827513 26.309998364736153 29.213043653327354 23.099129037108984 47 19.91176149142637 26.98456524579495 31.17470287913264 21.928970383646046 48 20.54696699643118 26.24524520329452 30.74452166067207 22.46326613960223 49 21.44800559441019 25.524743021162287 30.754793418514964 22.272457965912558 50 19.722843321179788 26.29339920406203 31.122440175227972 22.861317299530214 51 20.056387841854374 25.188651104542664 30.447544597918203 24.30741645568476 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 677.0 1 1240.0 2 1803.0 3 18951.5 4 36100.0 5 23412.5 6 10725.0 7 10281.5 8 9838.0 9 9742.0 10 9646.0 11 9457.0 12 9268.0 13 9054.5 14 8841.0 15 8424.5 16 8008.0 17 7547.5 18 7087.0 19 6769.0 20 6451.0 21 6529.5 22 6608.0 23 6992.5 24 7377.0 25 8002.5 26 10094.0 27 11560.0 28 13388.0 29 15216.0 30 17251.0 31 19286.0 32 22555.0 33 25824.0 34 28865.0 35 31906.0 36 35140.0 37 38374.0 38 41184.0 39 43994.0 40 48481.5 41 52969.0 42 59623.0 43 66277.0 44 79046.0 45 91815.0 46 92027.0 47 92239.0 48 94193.5 49 96148.0 50 89013.0 51 81878.0 52 78401.0 53 74924.0 54 71661.0 55 68398.0 56 64346.5 57 60295.0 58 55972.5 59 51650.0 60 47851.0 61 44052.0 62 39520.0 63 34988.0 64 30950.0 65 26912.0 66 23536.5 67 20161.0 68 16933.5 69 13706.0 70 11072.5 71 8439.0 72 7268.5 73 6098.0 74 5058.5 75 3345.0 76 2671.0 77 1877.0 78 1083.0 79 801.5 80 520.0 81 400.5 82 281.0 83 211.0 84 141.0 85 82.5 86 24.0 87 16.0 88 8.0 89 9.0 90 10.0 91 7.0 92 4.0 93 2.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1216929.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.760154345978734 #Duplication Level Percentage of deduplicated Percentage of total 1 74.50182107584352 24.40691157501125 2 8.6179130738849 5.646483248813946 3 3.503180604399204 3.442942119058709 4 2.061211827949289 2.701024704935026 5 1.3825546120079923 2.2646351240563285 6 1.014462672669935 1.9940372240940707 7 0.8403218731280483 1.9270351984783778 8 0.6529912252663855 1.7113674661037244 9 0.5613598005545837 1.6551210338816398 >10 6.6920477648023375 45.92659154356712 >50 0.1361692007479573 2.7202120903368834 >100 0.0303144265357073 1.8213382701567014 >500 0.0035966268610113502 0.7950733604732714 >1k 0.0017983134305056751 1.2479462039904379 >5k 0.0 0.0 >10k+ 2.569019186436679E-4 1.7392808370425135 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20666 1.6982091806506376 No Hit GAATCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTC 4135 0.3397897494430653 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2402 0.19738209870912765 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCG 2373 0.1949990508895753 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGC 2041 0.16771726205883827 No Hit GCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC 1396 0.11471499158948469 No Hit GAACTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCT 1294 0.10633323718967994 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.108703137159193E-4 0.0 0.0 0.06105532861818561 0.0 2 4.108703137159193E-4 0.0 0.0 0.27331093268382955 0.0 3 4.108703137159193E-4 0.0 0.0 0.43182469971543125 0.0 4 4.108703137159193E-4 0.0 0.0 0.7134352127363224 0.0 5 4.108703137159193E-4 0.0 0.0 1.49540359380046 0.0 6 4.108703137159193E-4 0.0 0.0 2.28904069177413 0.0 7 4.108703137159193E-4 0.0 0.0 2.901977025775538 0.0 8 4.108703137159193E-4 0.0 0.0 3.7450829095206046 0.0 9 4.108703137159193E-4 0.0 0.0 4.235744238160156 0.0 10 4.108703137159193E-4 0.0 0.0 5.158641136828853 0.0 11 4.108703137159193E-4 0.0 0.0 5.86081850296936 0.0 12 4.108703137159193E-4 0.0 0.0 6.606548122363753 0.0 13 4.108703137159193E-4 0.0 0.0 6.941900472418687 0.0 14 4.108703137159193E-4 0.0 0.0 7.147993021778592 0.0 15 4.108703137159193E-4 0.0 0.0 7.351866871444431 0.0 16 4.108703137159193E-4 0.0 0.0 7.638654350418142 0.0 17 4.108703137159193E-4 0.0 0.0 7.966939731077162 0.0 18 4.108703137159193E-4 0.0 0.0 8.339023887178298 0.0 19 4.108703137159193E-4 0.0 0.0 8.60592524296816 0.0 20 4.108703137159193E-4 0.0 0.0 8.860007444970085 0.0 21 4.930443764591032E-4 0.0 0.0 9.144329702061501 0.0 22 4.930443764591032E-4 0.0 0.0 9.465219417073634 0.0 23 4.930443764591032E-4 0.0 0.0 9.783643910203471 0.0 24 4.930443764591032E-4 0.0 0.0 10.056050928197125 0.0 25 5.752184392022871E-4 0.0 0.0 10.303394857054109 0.0 26 5.752184392022871E-4 0.0 0.0 10.548766608405256 0.0 27 5.752184392022871E-4 0.0 0.0 10.825364503598813 0.0 28 5.752184392022871E-4 0.0 0.0 11.098428914094413 0.0 29 5.752184392022871E-4 0.0 0.0 11.388256833389622 0.0 30 5.752184392022871E-4 0.0 0.0 11.782363638305933 0.0 31 6.573925019454709E-4 0.0 0.0 12.102760308941606 0.0 32 6.573925019454709E-4 0.0 0.0 12.44846659090218 0.0 33 6.573925019454709E-4 0.0 0.0 12.770917613106434 0.0 34 6.573925019454709E-4 0.0 0.0 13.112433017867106 0.0 35 6.573925019454709E-4 0.0 0.0 13.44753884573381 0.0 36 6.573925019454709E-4 0.0 0.0 13.757088540087384 0.0 37 7.395665646886548E-4 0.0 0.0 14.077074340409341 0.0 38 7.395665646886548E-4 0.0 0.0 14.44250239742828 0.0 39 7.395665646886548E-4 0.0 0.0 14.936615036703046 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCG 35 1.2120108E-7 45.000004 1 ATTTACG 25 3.890942E-5 45.0 1 TAATGCG 25 3.890942E-5 45.0 1 CGTTTTT 9790 0.0 43.71297 1 CGTTATT 1360 0.0 42.518383 1 GCGATAT 60 3.6379788E-12 41.250004 9 TACGGGA 405 0.0 39.444443 4 CGTATGG 110 0.0 38.86364 2 TATAGCG 35 6.2485906E-6 38.57143 1 ACGTAAG 85 0.0 37.058826 1 GTTATTT 1630 0.0 36.579754 2 CGAATAT 80 0.0 36.5625 14 TACGGGT 210 0.0 36.42857 4 ACAACGA 520 0.0 36.346153 13 AGGGCGA 1115 0.0 36.12108 6 TAACGGG 380 0.0 36.11842 3 CTCACGA 50 4.879439E-8 36.0 24 TCTTGCG 50 4.879439E-8 36.0 1 TACGCGA 25 0.0021071574 36.0 38 TACTACG 25 0.0021071574 36.0 1 >>END_MODULE