##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935998.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 982633 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07077515206593 33.0 31.0 34.0 30.0 34.0 2 32.18515966795334 33.0 31.0 34.0 30.0 34.0 3 32.1383252954053 33.0 31.0 34.0 30.0 34.0 4 35.761896862816535 37.0 35.0 37.0 35.0 37.0 5 32.08950340564585 37.0 35.0 37.0 0.0 37.0 6 33.86959933159175 37.0 35.0 37.0 17.0 37.0 7 35.500300722650266 37.0 35.0 37.0 32.0 37.0 8 35.728760381546316 37.0 35.0 37.0 35.0 37.0 9 37.67902767360754 39.0 37.0 39.0 35.0 39.0 10 37.33092314221077 39.0 37.0 39.0 34.0 39.0 11 37.24930060358241 39.0 37.0 39.0 34.0 39.0 12 37.237854824741284 39.0 37.0 39.0 34.0 39.0 13 37.18771097652939 39.0 37.0 39.0 33.0 39.0 14 38.42300329828125 40.0 38.0 41.0 34.0 41.0 15 38.51847536160499 40.0 38.0 41.0 34.0 41.0 16 38.517305036570114 40.0 38.0 41.0 34.0 41.0 17 38.45112366468458 40.0 38.0 41.0 34.0 41.0 18 38.3580370290841 40.0 38.0 41.0 34.0 41.0 19 38.215527058423646 40.0 37.0 41.0 34.0 41.0 20 38.15606538758621 40.0 37.0 41.0 34.0 41.0 21 38.17647076782481 40.0 37.0 41.0 34.0 41.0 22 38.24054250162573 40.0 37.0 41.0 34.0 41.0 23 38.201634791422634 40.0 37.0 41.0 34.0 41.0 24 38.19076298068557 40.0 37.0 41.0 34.0 41.0 25 38.0260198873842 40.0 36.0 41.0 34.0 41.0 26 38.02043387510902 40.0 37.0 41.0 34.0 41.0 27 37.96937106732626 40.0 37.0 41.0 34.0 41.0 28 37.89840357488503 40.0 36.0 41.0 33.0 41.0 29 37.89326432147099 40.0 36.0 41.0 33.0 41.0 30 37.724824018733344 40.0 36.0 41.0 33.0 41.0 31 37.728443884949925 40.0 36.0 41.0 33.0 41.0 32 37.56291005899456 40.0 36.0 41.0 33.0 41.0 33 37.45489312897084 40.0 36.0 41.0 33.0 41.0 34 37.27009575294133 40.0 36.0 41.0 32.0 41.0 35 37.16969102401405 40.0 36.0 41.0 32.0 41.0 36 37.0880522026026 40.0 36.0 41.0 31.0 41.0 37 37.011144547353894 40.0 36.0 41.0 31.0 41.0 38 36.97612638696238 40.0 35.0 41.0 31.0 41.0 39 36.84676069295454 40.0 35.0 41.0 31.0 41.0 40 36.80586546554003 40.0 35.0 41.0 31.0 41.0 41 36.7235325904992 40.0 35.0 41.0 30.0 41.0 42 36.704893892226295 40.0 35.0 41.0 31.0 41.0 43 36.64074481520568 40.0 35.0 41.0 31.0 41.0 44 36.66068511845216 40.0 35.0 41.0 31.0 41.0 45 36.65071903752469 40.0 35.0 41.0 31.0 41.0 46 36.53783253768192 39.0 35.0 41.0 31.0 41.0 47 36.39856182318322 39.0 35.0 41.0 30.0 41.0 48 36.40751531853703 39.0 35.0 41.0 30.0 41.0 49 36.37707363786887 39.0 35.0 41.0 30.0 41.0 50 36.26030980030184 39.0 35.0 41.0 30.0 41.0 51 35.31495482036529 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 13.0 9 36.0 10 48.0 11 43.0 12 21.0 13 27.0 14 26.0 15 41.0 16 64.0 17 130.0 18 275.0 19 585.0 20 1160.0 21 2206.0 22 3752.0 23 4876.0 24 6213.0 25 7687.0 26 9194.0 27 9947.0 28 10457.0 29 11269.0 30 13347.0 31 17518.0 32 22447.0 33 31966.0 34 52441.0 35 68037.0 36 67119.0 37 106479.0 38 185500.0 39 349436.0 40 272.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.4758796010311 18.376647232486594 22.64395761184491 13.503515554637389 2 31.710109471186087 27.166907685778924 24.38071996360798 16.74226287942701 3 30.51820974870577 27.489713860617343 26.439983188026456 15.552093202650429 4 26.509286783570264 23.972429177526095 31.173388233450332 18.344895805453305 5 24.24974532709567 35.5595629293948 22.85787267474225 17.33281906876728 6 23.91096167134627 36.5381581933438 25.591955491012413 13.958924644297516 7 76.66504178060374 5.334850345958257 13.798742765610356 4.201365107827643 8 77.88482576913253 8.18912045494096 9.580586037717032 4.345467738209484 9 72.19328070602148 7.2253832305652255 10.964724368100805 9.616611695312493 10 37.73758870300509 31.00262254575208 18.099432850311356 13.160355900931478 11 27.09933413593885 24.099027816081893 30.10544119727304 18.696196850706215 12 24.38906488994365 22.379871223539205 31.78694385391087 21.44412003260627 13 24.46864699231554 23.81102609010689 34.030813131657496 17.689513785920074 14 19.755391890970483 29.140380996770922 30.84111769093853 20.263109421320067 15 18.432313997189183 25.534660448000423 35.62225164430667 20.410773910503718 16 21.838570453058264 25.960048156331002 30.70617412604706 21.495207264563675 17 22.200862376899615 26.220063848863205 30.463662425340893 21.11541134889628 18 22.41620218331768 23.79698218968832 31.938882573656695 21.84793305333731 19 21.69070242908594 26.630389982831844 29.5568131743998 22.122094413682422 20 23.9898314019578 26.032811843282282 30.982981438644945 18.99437531611497 21 22.43177259465131 28.378346747972028 30.975450651463976 18.214430005912686 22 21.59799233284451 23.1025214907295 32.330381739672895 22.969104436753092 23 21.090681872072278 26.908825573739126 31.094925572416148 20.90556698177244 24 20.874527926499518 26.071585220524856 31.058391077849002 21.995495775126624 25 20.044818360466216 30.113786123608712 28.938779788588416 20.902615727336656 26 20.81519753560078 26.51925998821534 30.27040614349406 22.395136332689823 27 21.834092687707415 26.272474056946997 30.323019886366527 21.57041336897906 28 18.33359962468185 27.311926222709804 31.65332326514579 22.70115088746256 29 22.050348400674512 24.499787814982806 31.792032223627743 21.657831560714936 30 21.554639422856752 26.233497144915752 31.92025914049294 20.291604291734554 31 22.134306501002918 24.995395025406232 28.968088798157606 23.90220967543325 32 24.057812021375224 26.285398516027858 29.583781533899227 20.07300792869769 33 23.07117713327356 24.78443121694468 29.633138720152896 22.511252929628863 34 22.355345281503876 24.70474734717845 30.775477721590867 22.164429649726806 35 21.134034782060038 26.30707497102173 31.270169025465254 21.288721221452974 36 22.029587852229675 26.806142272852636 30.2335663467439 20.930703528173794 37 19.658916401138573 26.50918501617593 32.6558338667641 21.17606471592141 38 20.909128840574255 26.757192156176313 28.928704816549004 23.404974186700425 39 21.230713806680622 25.700235998587466 31.865304747550717 21.203745447181195 40 22.2070701879542 25.808923575739872 30.587411576855246 21.39659465945068 41 19.874154440162297 25.948751975559542 31.172370559506955 23.004723024771202 42 21.240687011325694 26.147808998883608 31.06103703010178 21.55046695968892 43 21.790027405959293 25.227119382312623 30.032066905955734 22.950786305772347 44 21.447376589225073 24.31507999426032 31.05808577566599 23.179457640848618 45 20.984742014566983 24.538459424831043 29.458811173652826 25.017987386949148 46 23.097534888406965 25.738297004069675 29.93080834858996 21.233359758933396 47 19.51338902723601 25.879244845227056 33.33441885220626 21.272947275330665 48 20.56892044130413 25.79223372306853 30.730801835476722 22.908044000150614 49 20.697249125563662 24.728866219636426 32.624794811491164 21.94908984330874 50 20.550500542929047 25.440525608238275 31.008219752440635 23.00075409639204 51 20.29587852229673 24.521973106948373 29.827717978126117 25.354430392628785 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 540.0 1 1088.0 2 1636.0 3 6261.5 4 10887.0 5 7178.0 6 3469.0 7 3275.5 8 3082.0 9 3069.0 10 3056.0 11 3099.5 12 3143.0 13 3019.5 14 2896.0 15 2932.0 16 2968.0 17 2892.5 18 2817.0 19 3035.5 20 3254.0 21 3709.5 22 4165.0 23 4274.5 24 4384.0 25 5514.5 26 8549.5 27 10454.0 28 11946.0 29 13438.0 30 15528.5 31 17619.0 32 19482.0 33 21345.0 34 25140.5 35 28936.0 36 32953.5 37 36971.0 38 40940.0 39 44909.0 40 48529.0 41 52149.0 42 59563.5 43 66978.0 44 87052.5 45 107127.0 46 97160.5 47 87194.0 48 87607.5 49 88021.0 50 80297.0 51 72573.0 52 67144.0 53 61715.0 54 57445.5 55 53176.0 56 48734.0 57 44292.0 58 39716.5 59 35141.0 60 31927.0 61 28713.0 62 25114.0 63 21515.0 64 17759.5 65 14004.0 66 11585.5 67 9167.0 68 7596.0 69 6025.0 70 4692.0 71 3359.0 72 2663.0 73 1967.0 74 1660.0 75 1117.5 76 882.0 77 650.5 78 419.0 79 273.5 80 128.0 81 97.5 82 67.0 83 43.0 84 19.0 85 21.5 86 24.0 87 13.5 88 3.0 89 3.5 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 982633.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.3534279901873 #Duplication Level Percentage of deduplicated Percentage of total 1 72.512068118371 21.28477769932159 2 9.961504353610351 5.8480860143527735 3 3.892746939252264 3.4279640089609003 4 2.149049881726957 2.52327923802371 5 1.367951376410795 2.007703111077593 6 1.0016949460245141 1.7641908279759078 7 0.7769041301400553 1.596335960754165 8 0.5963886858974724 1.4004841876523106 9 0.5138900460099178 1.3575991014383544 >10 6.865634962708661 46.466179566233066 >50 0.31962079476421595 5.717631934193071 >100 0.0355134072186753 1.716723617478096 >500 0.0031645610392873414 0.7172195285188464 >1k 0.0024613252527790432 1.1577279394727156 >5k 0.0014064715730165963 3.014097264546823 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTC 8280 0.8426340251141575 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCG 8155 0.8299131008219752 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGC 6758 0.6877440509325455 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6010 0.6116220399681264 No Hit GCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 2862 0.29125828259380665 No Hit GAACTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCT 2043 0.207910786631428 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCT 1522 0.15488997418161204 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTC 1322 0.13453649531412032 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTCTGTATTCGTA 1189 0.12100143186723833 No Hit CCTGTCTCTTATACACATCTGACGCGTCTGTATTCGTATGCCGTCTTCTGC 1165 0.11855901440313932 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTCTGTATT 1114 0.11336887729192892 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0176739433745865E-4 0.0 0.0 0.09454190933949908 0.0 2 1.0176739433745865E-4 0.0 0.0 0.6148785965869251 0.0 3 1.0176739433745865E-4 0.0 0.0 0.8056924609696601 0.0 4 1.0176739433745865E-4 0.0 0.0 1.2122532013478073 0.0 5 1.0176739433745865E-4 0.0 0.0 2.6629474076282804 0.0 6 1.0176739433745865E-4 0.0 0.0 3.3042855267429445 0.0 7 1.0176739433745865E-4 0.0 0.0 3.9669947986684755 0.0 8 1.0176739433745865E-4 0.0 0.0 4.847995131447855 0.0 9 1.0176739433745865E-4 0.0 0.0 5.163677588682652 0.0 10 2.035347886749173E-4 0.0 0.0 6.730386624507828 0.0 11 2.035347886749173E-4 0.0 0.0 7.654332797697615 0.0 12 3.0530218301237595E-4 0.0 0.0 9.16659627755225 0.0 13 3.0530218301237595E-4 0.0 0.0 9.521968018578656 0.0 14 3.0530218301237595E-4 0.0 0.0 9.693853147614623 0.0 15 3.0530218301237595E-4 0.0 0.0 10.037826940475233 0.0 16 3.0530218301237595E-4 0.0 0.0 10.494966075839098 0.0 17 3.0530218301237595E-4 0.0 0.0 11.0731066430702 0.0 18 3.0530218301237595E-4 0.0 0.0 11.64453056227503 0.0 19 4.070695773498346E-4 0.0 0.0 12.17514575635054 0.0 20 4.070695773498346E-4 0.0 0.0 12.568273200676142 0.0 21 4.070695773498346E-4 0.0 0.0 13.01411615526855 0.0 22 5.088369716872933E-4 0.0 0.0 13.55551869314383 0.0 23 5.088369716872933E-4 0.0 0.0 14.046749905610742 0.0 24 5.088369716872933E-4 0.0 0.0 14.428988238742237 0.0 25 5.088369716872933E-4 0.0 0.0 14.76726305751995 0.0 26 5.088369716872933E-4 0.0 0.0 15.104520202354287 0.0 27 5.088369716872933E-4 0.0 0.0 15.476072959080348 0.0 28 5.088369716872933E-4 0.0 0.0 15.818011404054209 0.0 29 6.106043660247519E-4 0.0 0.0 16.192108345638708 0.0 30 7.123717603622105E-4 0.0 0.0 16.654335850719445 0.0 31 7.123717603622105E-4 0.0 0.0 17.04329083187721 0.0 32 7.123717603622105E-4 0.0 0.0 17.421662004023883 0.0 33 8.141391546996692E-4 0.0 0.0 17.787515786667047 0.0 34 8.141391546996692E-4 0.0 0.0 18.156727893323346 0.0 35 8.141391546996692E-4 0.0 0.0 18.560540914054382 0.0 36 8.141391546996692E-4 0.0 0.0 18.92385051183911 0.0 37 8.141391546996692E-4 0.0 0.0 19.291230805397337 0.0 38 8.141391546996692E-4 0.0 0.0 19.704101124224405 0.0 39 8.141391546996692E-4 0.0 0.0 20.191770477889506 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTACG 25 3.8903905E-5 45.000004 1 TTTACGT 20 7.032787E-4 45.0 24 GCTATCG 20 7.032787E-4 45.0 15 TACGGAC 20 7.032787E-4 45.0 4 CAATCGA 55 1.8189894E-12 45.0 41 GAGATCG 35 1.2116834E-7 45.0 33 TAATACG 265 0.0 43.301888 4 CGATGAA 1325 0.0 41.773586 19 CCGATGA 1245 0.0 41.566265 18 CGTTTTT 2800 0.0 41.383926 1 GTCGAAG 60 3.6379788E-12 41.249996 1 GTTAGCG 45 1.927765E-8 40.0 1 CCGTCTA 40 3.457535E-7 39.375 41 CGAACGG 120 0.0 39.374996 2 ATCGAAT 115 0.0 39.130436 43 CGGCGAA 110 0.0 38.863636 31 AGTACGG 110 0.0 38.863636 2 CTACGAA 175 0.0 38.571426 11 CGTAAGA 35 6.2473664E-6 38.571426 30 TACGGCT 830 0.0 38.22289 7 >>END_MODULE