##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935997.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 712173 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14961252392326 33.0 31.0 34.0 30.0 34.0 2 32.29299341592562 34.0 31.0 34.0 30.0 34.0 3 32.16360350645138 33.0 31.0 34.0 30.0 34.0 4 35.826582866803435 37.0 35.0 37.0 35.0 37.0 5 32.09936349735247 37.0 35.0 37.0 0.0 37.0 6 33.9126083128678 37.0 35.0 37.0 17.0 37.0 7 35.582138047918136 37.0 35.0 37.0 32.0 37.0 8 35.85385152203187 37.0 35.0 37.0 35.0 37.0 9 37.844335575766 39.0 38.0 39.0 35.0 39.0 10 37.452397100142804 39.0 37.0 39.0 35.0 39.0 11 37.396850203532004 39.0 37.0 39.0 35.0 39.0 12 37.37870713997863 39.0 37.0 39.0 35.0 39.0 13 37.3553167559006 39.0 37.0 39.0 35.0 39.0 14 38.580307032139665 40.0 38.0 41.0 34.0 41.0 15 38.72172772626876 40.0 38.0 41.0 35.0 41.0 16 38.65871915953006 40.0 38.0 41.0 35.0 41.0 17 38.664236077469944 40.0 38.0 41.0 35.0 41.0 18 38.484351414614146 40.0 38.0 41.0 35.0 41.0 19 38.255026517433265 40.0 37.0 41.0 34.0 41.0 20 38.24051880652594 40.0 36.0 41.0 34.0 41.0 21 38.107177609934666 40.0 36.0 41.0 34.0 41.0 22 38.17718728455024 40.0 36.0 41.0 34.0 41.0 23 38.18435408250524 40.0 36.0 41.0 34.0 41.0 24 38.141211475301645 40.0 36.0 41.0 34.0 41.0 25 37.87581809476068 40.0 35.0 41.0 34.0 41.0 26 37.932610475263736 40.0 35.0 41.0 34.0 41.0 27 37.90672350678838 40.0 35.0 41.0 34.0 41.0 28 37.832227562684906 40.0 35.0 41.0 34.0 41.0 29 37.78208665591085 40.0 35.0 41.0 34.0 41.0 30 37.55735053140178 40.0 35.0 41.0 33.0 41.0 31 37.41425327834669 40.0 35.0 41.0 33.0 41.0 32 37.175010847083506 40.0 35.0 41.0 33.0 41.0 33 36.87541650694424 40.0 35.0 41.0 31.0 41.0 34 36.57561996874355 40.0 35.0 41.0 30.0 41.0 35 36.43714659219038 40.0 35.0 41.0 30.0 41.0 36 36.2976032508955 40.0 35.0 41.0 29.0 41.0 37 36.23261904059828 40.0 35.0 41.0 29.0 41.0 38 36.11160350083477 40.0 35.0 41.0 28.0 41.0 39 36.02480015389519 40.0 35.0 41.0 27.0 41.0 40 35.953754214214804 39.0 35.0 41.0 27.0 41.0 41 35.83604685940074 39.0 35.0 41.0 26.0 41.0 42 35.80592917732068 39.0 35.0 41.0 26.0 41.0 43 35.737148136758904 39.0 35.0 41.0 26.0 41.0 44 35.65953778084819 39.0 35.0 41.0 26.0 41.0 45 35.60999223503278 39.0 35.0 41.0 25.0 41.0 46 35.49533048851894 39.0 35.0 41.0 25.0 41.0 47 35.438012954717465 39.0 35.0 41.0 24.0 41.0 48 35.37410432577477 39.0 35.0 41.0 24.0 41.0 49 35.33027087519465 39.0 35.0 41.0 24.0 41.0 50 35.22997221180809 39.0 35.0 41.0 24.0 41.0 51 34.33384304094651 37.0 34.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 21.0 9 25.0 10 34.0 11 22.0 12 15.0 13 25.0 14 35.0 15 46.0 16 69.0 17 155.0 18 250.0 19 435.0 20 782.0 21 1227.0 22 1931.0 23 3287.0 24 5142.0 25 8622.0 26 11723.0 27 12226.0 28 11239.0 29 10769.0 30 10896.0 31 12638.0 32 15590.0 33 22276.0 34 37635.0 35 48992.0 36 50772.0 37 77328.0 38 132543.0 39 235266.0 40 156.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.45537671324243 18.43919946417514 21.997885345274252 18.107538477308182 2 37.18703180266593 22.16933245152512 23.81303419253468 16.830601553274274 3 30.566449444165954 22.30427157446295 31.262347772240734 15.866931209130367 4 26.401590624749886 24.61522691817859 30.555497049172043 18.427685407899485 5 21.313781904115995 35.51538741288985 26.923233540165096 16.247597142829058 6 23.61027446982685 33.05095812393899 29.26845022206683 14.07031718416733 7 76.503040693764 5.5677482858799765 14.052344023151678 3.8768669972043313 8 78.5202471871301 4.838992772823457 13.28104266800342 3.3597173720430287 9 73.19288992983446 6.816461730506491 14.930641852471238 5.060006487187804 10 36.13560188325028 29.062039701027697 21.711016845625995 13.091341570096029 11 26.485278155729013 24.991259146302937 31.233000970269863 17.290461727698187 12 23.366794304192943 23.73622701225685 34.242522533148545 18.654456150401657 13 22.421658782346423 24.207882073597286 35.7949543158755 17.575504828180794 14 20.103682672609043 25.80988046443771 35.5490870897942 18.53734977315905 15 19.235775577001654 25.22097861053424 37.16498659735766 18.37825921510644 16 23.22904687484642 25.422615010678584 34.29012332677594 17.058214787699054 17 23.100847687289463 24.608908228759024 33.38963987682768 18.90060420712383 18 24.04289407208642 23.2979907971799 34.06279092299202 18.596324207741656 19 23.23873553195642 26.042408235077712 31.837067678780294 18.88178855418557 20 24.24087967389946 25.731247884994236 32.16493745199551 17.862934989110794 21 23.01435184990164 25.63127217684467 33.85736330919594 17.497012664057753 22 23.495274322390767 23.290548785196854 33.175506513164635 20.03867037924774 23 21.04025285990904 26.1505280318125 33.48680727856855 19.322411829709914 24 20.408524333272954 25.54491675477728 34.36805382961724 19.678505082332524 25 21.425131253220776 26.586658017082925 32.47314908034986 19.51506164934644 26 20.7651792471773 26.11823250811249 32.69991982285203 20.416668421858173 27 21.00950190473382 26.056730597762062 33.29036624528029 19.64340125222383 28 19.313565664522525 26.568965686708147 33.536654717322904 20.580813931446432 29 20.415264268653825 25.8764373263238 33.10880923595811 20.59948916906426 30 21.359276467936862 25.13490401910772 32.99956611665986 20.506253396295563 31 22.11611504508034 25.726754594740324 31.900394988296384 20.256735371882957 32 22.50267842223729 25.74978270729163 31.26894729230117 20.47859157816991 33 22.190675580231208 26.911438653248577 30.205301240007692 20.69258452651252 34 20.723335481687734 27.747752301758137 31.38591325422334 20.142998962330783 35 21.132224894793822 28.3026736481164 29.973054300008567 20.592047157081215 36 22.16132877826034 29.671723022355522 28.50037841928857 19.666569780095568 37 21.598122927996428 29.212564924533783 28.72026881108944 20.469043336380345 38 21.777854538152948 29.287406290325524 28.931313037702918 20.003426133818607 39 21.240765937489908 28.17152573883031 28.618608119094656 21.96910020458512 40 22.829003626927726 27.026860046645968 29.944128743999 20.200007582427304 41 20.6004720763073 27.545975486293354 29.791637706006828 22.061914731392513 42 21.96643231349686 27.54190344200075 29.53945179050596 20.95221245399643 43 21.990022087329905 27.073337517709884 29.419817937495523 21.516822457464688 44 21.747805659579907 26.925058939330754 29.63310880923596 21.694026591853383 45 21.390729499714254 27.040199502087276 29.622577660203348 21.946493337995122 46 21.175051567526427 27.44529770154162 28.903651219577263 22.475999511354686 47 20.4712899815073 28.512875382807266 30.03076499670726 20.98506963897817 48 21.113268826535126 27.96736186291814 29.453938860361177 21.465430450185558 49 22.023721764234253 26.767091703841622 29.907059099404215 21.302127432519907 50 20.151845127518172 27.658869403922925 30.32788381474726 21.861401653811644 51 21.02171803761165 26.551694602294667 29.219866521196398 23.20672083889729 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 454.0 1 797.0 2 1140.0 3 8735.5 4 16331.0 5 10940.5 6 5550.0 7 5401.5 8 5253.0 9 5196.5 10 5140.0 11 5075.5 12 5011.0 13 4953.5 14 4896.0 15 4664.5 16 4433.0 17 4306.5 18 4180.0 19 4244.5 20 4309.0 21 4415.5 22 4522.0 23 5079.0 24 5636.0 25 5924.5 26 6907.0 27 7601.0 28 8761.5 29 9922.0 30 12056.0 31 14190.0 32 16578.0 33 18966.0 34 21092.0 35 23218.0 36 24133.5 37 25049.0 38 28002.5 39 30956.0 40 33116.5 41 35277.0 42 37608.0 43 39939.0 44 42603.0 45 45267.0 46 48976.5 47 52686.0 48 54689.0 49 56692.0 50 55510.0 51 54328.0 52 51085.5 53 47843.0 54 44070.5 55 40298.0 56 36325.5 57 32353.0 58 29080.0 59 25807.0 60 23695.0 61 21583.0 62 19410.0 63 17237.0 64 15064.5 65 12892.0 66 11294.0 67 9696.0 68 8105.0 69 6514.0 70 5338.5 71 4163.0 72 3556.0 73 2949.0 74 2424.5 75 1406.5 76 913.0 77 701.0 78 489.0 79 318.0 80 147.0 81 139.5 82 132.0 83 96.5 84 61.0 85 38.5 86 16.0 87 13.0 88 10.0 89 7.0 90 4.0 91 2.0 92 0.0 93 1.0 94 2.0 95 1.5 96 1.0 97 2.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 712173.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.81525007398142 #Duplication Level Percentage of deduplicated Percentage of total 1 74.17556846362818 25.824409654409447 2 8.738966725349258 6.084986238624738 3 3.769147648203719 3.9367145381391433 4 2.1462020426409936 2.9888224329534374 5 1.4095507330189623 2.4536930631009497 6 1.0665754343863696 2.227985428255609 7 0.8202476955771842 1.9989990050888657 8 0.6998063761199593 1.9491147190386466 9 0.6147289590340457 1.9261748192839718 >10 6.433605337816814 45.43174342712307 >50 0.10220439706518883 2.1649725038300325 >100 0.02216480888779159 1.532343237976343 >500 4.1045942384799246E-4 0.07673862900245232 >1k 4.1045942384799246E-4 0.14618923178679463 >5k 4.1045942384799246E-4 1.257113071386542 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8797 1.2352335738647773 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1023 0.143644872804782 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.40415320434782E-4 0.0 0.0 0.05813194265999975 0.0 2 1.40415320434782E-4 0.0 0.0 0.22915780294956423 0.0 3 1.40415320434782E-4 0.0 0.0 0.38768669972043307 0.0 4 1.40415320434782E-4 0.0 0.0 0.5296465886799977 0.0 5 1.40415320434782E-4 0.0 0.0 0.9483650742165176 0.0 6 1.40415320434782E-4 0.0 0.0 1.464672207455211 0.0 7 1.40415320434782E-4 0.0 0.0 1.8927985194608614 0.0 8 1.40415320434782E-4 0.0 0.0 2.5211570784065107 0.0 9 1.40415320434782E-4 0.0 0.0 2.881743621283031 0.0 10 1.40415320434782E-4 0.0 0.0 3.4695221526230284 0.0 11 1.40415320434782E-4 0.0 0.0 4.100548602656938 0.0 12 1.40415320434782E-4 0.0 0.0 4.612362445641719 0.0 13 1.40415320434782E-4 0.0 0.0 4.862301716015631 0.0 14 2.80830640869564E-4 0.0 0.0 4.983339722230413 0.0 15 2.80830640869564E-4 0.0 0.0 5.134847852979543 0.0 16 2.80830640869564E-4 0.0 0.0 5.405989836739107 0.0 17 2.80830640869564E-4 0.0 0.0 5.739897468733019 0.0 18 2.80830640869564E-4 0.0 0.0 6.1045560559021474 0.0 19 2.80830640869564E-4 0.0 0.0 6.345087499806929 0.0 20 2.80830640869564E-4 0.0 0.0 6.5794406696125805 0.0 21 2.80830640869564E-4 0.0 0.0 6.8904606043756225 0.0 22 2.80830640869564E-4 0.0 0.0 7.213135010734751 0.0 23 2.80830640869564E-4 0.0 0.0 7.533984017928228 0.0 24 2.80830640869564E-4 0.0 0.0 7.79712232842301 0.0 25 2.80830640869564E-4 0.0 0.0 8.041023740018225 0.0 26 2.80830640869564E-4 0.0 0.0 8.281133937961703 0.0 27 2.80830640869564E-4 0.0 0.0 8.53795355903692 0.0 28 2.80830640869564E-4 0.0 0.0 8.789858643896919 0.0 29 2.80830640869564E-4 0.0 0.0 9.073918837136482 0.0 30 2.80830640869564E-4 0.0 0.0 9.408388130412133 0.0 31 2.80830640869564E-4 0.0 0.0 9.704664456529523 0.0 32 2.80830640869564E-4 0.0 0.0 10.017088544496913 0.0 33 2.80830640869564E-4 0.0 0.0 10.294408802355607 0.0 34 2.80830640869564E-4 0.0 0.0 10.571729060214302 0.0 35 2.80830640869564E-4 0.0 0.0 10.868988293574736 0.0 36 2.80830640869564E-4 0.0 0.0 11.156418454504735 0.0 37 4.21245961304346E-4 0.0 0.0 11.45929430068256 0.0 38 4.21245961304346E-4 0.0 0.0 11.78702365857734 0.0 39 4.21245961304346E-4 0.0 0.0 12.206444220716033 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAAGTCG 20 7.031478E-4 45.0 15 TTTCGCA 40 6.8084773E-9 45.0 14 TTCGTAG 20 7.031478E-4 45.0 1 ATATCGA 20 7.031478E-4 45.0 39 GTTCGTC 20 7.031478E-4 45.0 39 CCAACGG 20 7.031478E-4 45.0 2 TTCGCGG 40 6.8084773E-9 45.0 2 CTTACGG 35 1.211065E-7 45.0 2 TTTCGCG 25 3.889307E-5 44.999996 1 CGTTATT 640 0.0 43.59375 1 CGTTTTT 5020 0.0 43.476093 1 CATACGG 60 3.6379788E-12 41.250004 2 ATAACGG 50 1.0804797E-9 40.499996 2 TCGCAAC 45 1.9264917E-8 40.000004 16 TAGACGG 110 0.0 38.863636 2 TTAACGG 35 6.2449417E-6 38.571426 2 TTCGATG 35 6.2449417E-6 38.571426 1 TAACGGG 225 0.0 38.0 3 CGTAAGG 90 0.0 37.500004 2 CCGAATT 30 1.1394857E-4 37.500004 10 >>END_MODULE