##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935995.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 827693 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19406833209898 33.0 31.0 34.0 30.0 34.0 2 32.316613768631605 34.0 31.0 34.0 30.0 34.0 3 32.24343083727904 34.0 31.0 34.0 30.0 34.0 4 35.87130614853575 37.0 35.0 37.0 35.0 37.0 5 32.12995518869919 37.0 35.0 37.0 0.0 37.0 6 33.94067607192522 37.0 35.0 37.0 17.0 37.0 7 35.60938657207443 37.0 35.0 37.0 32.0 37.0 8 35.86998198607455 37.0 35.0 37.0 35.0 37.0 9 37.836011661328534 39.0 38.0 39.0 35.0 39.0 10 37.403264253775255 39.0 37.0 39.0 34.0 39.0 11 37.363052484435656 39.0 37.0 39.0 34.0 39.0 12 37.33868958659793 39.0 37.0 39.0 35.0 39.0 13 37.296489157211674 39.0 37.0 39.0 34.0 39.0 14 38.5648144903968 40.0 38.0 41.0 34.0 41.0 15 38.688669591261494 40.0 38.0 41.0 35.0 41.0 16 38.638377997639225 40.0 38.0 41.0 35.0 41.0 17 38.64007186239343 40.0 38.0 41.0 35.0 41.0 18 38.5451683172384 40.0 38.0 41.0 35.0 41.0 19 38.36647162655719 40.0 37.0 41.0 34.0 41.0 20 38.395690189478465 40.0 37.0 41.0 34.0 41.0 21 38.32264740670756 40.0 37.0 41.0 34.0 41.0 22 38.371017998219145 40.0 37.0 41.0 34.0 41.0 23 38.39680896177689 40.0 37.0 41.0 35.0 41.0 24 38.371734447434015 40.0 37.0 41.0 34.0 41.0 25 38.101850565366625 40.0 36.0 41.0 34.0 41.0 26 38.13925694671817 40.0 37.0 41.0 34.0 41.0 27 38.13037805079903 40.0 37.0 41.0 34.0 41.0 28 38.039966509321694 40.0 36.0 41.0 34.0 41.0 29 38.014701102945175 40.0 36.0 41.0 34.0 41.0 30 37.86436275285644 40.0 36.0 41.0 34.0 41.0 31 37.81045991690156 40.0 36.0 41.0 34.0 41.0 32 37.695093470646725 40.0 36.0 41.0 33.0 41.0 33 37.591493464364206 40.0 36.0 41.0 33.0 41.0 34 37.45512285352178 40.0 36.0 41.0 33.0 41.0 35 37.39075236832981 40.0 36.0 41.0 33.0 41.0 36 37.285320765066274 40.0 36.0 41.0 33.0 41.0 37 37.22211617109242 40.0 35.0 41.0 33.0 41.0 38 37.09908263087884 40.0 35.0 41.0 32.0 41.0 39 37.01463102865434 40.0 35.0 41.0 32.0 41.0 40 36.93387282482756 40.0 35.0 41.0 32.0 41.0 41 36.83008313468883 40.0 35.0 41.0 31.0 41.0 42 36.80970722236385 40.0 35.0 41.0 31.0 41.0 43 36.74651833469656 39.0 35.0 41.0 31.0 41.0 44 36.68678604265108 39.0 35.0 41.0 31.0 41.0 45 36.65985335142378 39.0 35.0 41.0 31.0 41.0 46 36.54691413362201 39.0 35.0 41.0 31.0 41.0 47 36.474212056885825 39.0 35.0 41.0 31.0 41.0 48 36.42417055599117 39.0 35.0 41.0 31.0 41.0 49 36.371399782286424 39.0 35.0 41.0 31.0 41.0 50 36.27975348347757 39.0 35.0 41.0 31.0 41.0 51 35.3216989874265 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 13.0 9 34.0 10 29.0 11 29.0 12 21.0 13 19.0 14 23.0 15 36.0 16 48.0 17 88.0 18 159.0 19 319.0 20 623.0 21 1057.0 22 1632.0 23 2491.0 24 3763.0 25 5583.0 26 7471.0 27 8338.0 28 8698.0 29 8935.0 30 10444.0 31 13247.0 32 17393.0 33 26210.0 34 46425.0 35 62644.0 36 60663.0 37 95403.0 38 158191.0 39 287435.0 40 227.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.71970404485721 19.970810433336997 23.61950626621223 13.68997925559356 2 33.94555710873476 24.154970502348093 25.13903101753911 16.760441371378036 3 31.463477400437117 23.413391196977624 28.527364614657852 16.595766787927406 4 28.28186296126704 25.007218860132923 28.220366730176526 18.49055144842351 5 22.59098482166697 37.1706659353166 23.539404102728913 16.69894514028752 6 24.847860257365955 35.52621563792373 25.230248413360997 14.39567569134933 7 80.00804646167119 5.906054539545459 10.222993307905226 3.86290569087814 8 82.09142761869437 5.56691913547656 8.866572509372435 3.475080736456633 9 76.20506637122702 7.035096346109004 10.627370293091762 6.132466989572221 10 39.562736425220464 25.839411472611225 19.587576553142288 15.010275549026028 11 30.07093209680401 26.060991212925565 25.931353774889963 17.93672291538046 12 26.534959217970915 23.110621933494667 30.514695666146746 19.839723182387672 13 24.97894750831528 24.305146956661467 31.741962297615178 18.973943237408072 14 21.105651491555445 27.578703698110292 30.695922280362403 20.619722529971863 15 19.98724164635922 26.168277368541233 34.33616087124091 19.50832011385864 16 23.145417443424073 25.041168645862655 31.410317593600528 20.403096317112745 17 23.209571664856416 24.710852937018917 29.46756828920868 22.61200710891599 18 24.4606393916585 24.65612249952579 29.881731511562865 21.00150659725285 19 24.519235996921566 26.673899622202917 28.52241108720262 20.284453293672897 20 25.307209315531242 26.14604690386411 29.058721047538157 19.488022733066487 21 24.46486801265687 26.426464884927142 29.74859035898576 19.360076743430234 22 22.202918231759845 25.008547855303835 29.913748213407626 22.87478569952869 23 22.032202761168694 26.763183934139832 28.99505009707706 22.209563207614416 24 21.706598944294562 25.459318853729584 30.248292543249732 22.58578965872612 25 22.36493482486864 26.855851142875437 28.986351219594702 21.792862812661216 26 21.345716346519787 27.3346518576332 29.102577888178345 22.217053907668667 27 22.36759281521047 26.775507343906497 29.717540199083476 21.139359641799558 28 20.709731748365638 26.72718024678232 31.441126118017188 21.121961886834853 29 21.696087800670057 25.697088171580525 30.62862679761699 21.97819723013243 30 21.6422030873766 25.95769204282264 30.24237247385202 22.15773239594874 31 23.01010157147638 26.559122766533 28.413433483187607 22.01734217880301 32 22.16908926377292 26.867812099413673 29.082522142871813 21.880576493941597 33 21.748522701049787 26.603100424916004 28.485682493388246 23.162694380645966 34 20.76011274711759 26.229169510917693 29.63200123717369 23.37871650479103 35 21.506524762200478 26.024745890082436 29.63236369040212 22.83636565731497 36 22.388615102459486 27.12769106419892 28.56058949393072 21.923104339410866 37 21.398272064642327 27.800283438424632 29.36342339490608 21.438021102026962 38 20.729183404958118 28.269177098271943 27.511166579879255 23.490472916890685 39 22.425102060788237 26.126716065014442 27.838582662895544 23.609599211301774 40 22.360827021613087 25.856930045318737 29.582949233592647 22.199293699475533 41 20.59531734592415 27.23401067787211 28.96255012426105 23.20812185194269 42 21.144796440226028 27.872653266368086 28.942252743468895 22.040297549936994 43 21.346199617491028 26.520702724319285 29.34421337379922 22.788884284390466 44 21.756859125303706 25.829141964472335 29.048451539399274 23.36554737082469 45 21.69258408612855 25.952134426653362 28.162857484598756 24.19242400261933 46 21.313941280160638 27.629688785576295 28.578349702123855 22.47802023213921 47 20.90014051103489 26.69081410619638 30.21712156560464 22.191923817164096 48 21.060948926715582 26.325702887423237 29.51420393793351 23.099144247927676 49 20.916209270828677 25.909606581184086 30.392548928165397 22.78163521982184 50 20.122436700564098 25.917097281238334 30.171452458822294 23.789013559375274 51 20.97577241803422 25.319532725297904 28.252141796535675 25.4525530601322 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 560.0 1 1019.0 2 1478.0 3 5308.0 4 9138.0 5 6148.0 6 3158.0 7 3081.0 8 3004.0 9 3001.5 10 2999.0 11 2940.0 12 2881.0 13 2910.0 14 2939.0 15 2865.5 16 2792.0 17 2814.0 18 2836.0 19 2849.5 20 2863.0 21 2996.5 22 3130.0 23 3456.0 24 3782.0 25 4840.0 26 6951.0 27 8004.0 28 9450.0 29 10896.0 30 12209.0 31 13522.0 32 15328.5 33 17135.0 34 19318.0 35 21501.0 36 23821.0 37 26141.0 38 29500.5 39 32860.0 40 37108.0 41 41356.0 42 46196.5 43 51037.0 44 60141.5 45 69246.0 46 70746.0 47 72246.0 48 73283.5 49 74321.0 50 68095.5 51 61870.0 52 57390.5 53 52911.0 54 49006.5 55 45102.0 56 41911.0 57 38720.0 58 37116.5 59 35513.0 60 33612.0 61 31711.0 62 28249.0 63 24787.0 64 21424.5 65 18062.0 66 15150.5 67 12239.0 68 10188.5 69 8138.0 70 6966.5 71 5795.0 72 4586.5 73 3378.0 74 2547.0 75 1408.0 76 1100.0 77 798.0 78 496.0 79 368.0 80 240.0 81 168.5 82 97.0 83 71.0 84 45.0 85 38.0 86 31.0 87 20.0 88 9.0 89 7.0 90 5.0 91 3.5 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 827693.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.584842183722667 #Duplication Level Percentage of deduplicated Percentage of total 1 73.82271224240395 22.578560035082962 2 9.420585569294058 5.762542458302279 3 3.6496051274062475 3.348677905638754 4 2.064262688659106 2.5254059423354316 5 1.3630590829806597 2.0844473470026608 6 0.9947829400466277 1.8255167537031454 7 0.743774706749164 1.592376241831745 8 0.6104412620504504 1.4936199729796416 9 0.4851165978300342 1.3353493126802447 >10 6.4422631745312975 46.996094281813484 >50 0.36120871612319 6.600734552353129 >100 0.03736641856236508 1.9476308050531126 >500 0.002410736681442908 0.440917365671687 >1k 0.002410736681442908 1.4681270255517405 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4726 0.5709846525221307 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 2518 0.30421907639668333 No Hit GAATCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTC 1318 0.1592377850241575 No Hit GCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCGTCTTCTGC 1226 0.14812255268559718 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGCCG 1120 0.13531587194769074 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTTCCGAATCGTATGC 1039 0.12552963478004525 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.624532284313145E-4 0.0 0.0 0.07394045859998816 0.0 2 3.624532284313145E-4 0.0 0.0 0.37187701237052867 0.0 3 3.624532284313145E-4 0.0 0.0 0.5227783731407659 0.0 4 3.624532284313145E-4 0.0 0.0 0.7503990005956315 0.0 5 3.624532284313145E-4 0.0 0.0 1.4486047362971537 0.0 6 3.624532284313145E-4 0.0 0.0 2.0352956953846415 0.0 7 3.624532284313145E-4 0.0 0.0 2.524970006995347 0.0 8 3.624532284313145E-4 0.0 0.0 3.2698113914216984 0.0 9 3.624532284313145E-4 0.0 0.0 3.581521167872629 0.0 10 3.624532284313145E-4 0.0 0.0 4.414921957779032 0.0 11 3.624532284313145E-4 0.0 0.0 5.345339395162216 0.0 12 3.624532284313145E-4 0.0 0.0 6.181760628638879 0.0 13 3.624532284313145E-4 0.0 0.0 6.4879127889205295 0.0 14 3.624532284313145E-4 0.0 0.0 6.60933462044502 0.0 15 3.624532284313145E-4 0.0 0.0 6.830189454302501 0.0 16 3.624532284313145E-4 0.0 0.0 7.282651901127592 0.0 17 3.624532284313145E-4 0.0 0.0 7.8479581197376325 0.0 18 3.624532284313145E-4 0.0 0.0 8.477660195265637 0.0 19 3.624532284313145E-4 0.0 0.0 8.872613396512959 0.0 20 3.624532284313145E-4 0.0 0.0 9.248960665367473 0.0 21 3.624532284313145E-4 0.0 0.0 9.721841310727529 0.0 22 4.8327097124175266E-4 0.0 0.0 10.245827861296398 0.0 23 4.8327097124175266E-4 0.0 0.0 10.7863664426303 0.0 24 4.8327097124175266E-4 0.0 0.0 11.194247142358337 0.0 25 4.8327097124175266E-4 0.0 0.0 11.56709069667135 0.0 26 4.8327097124175266E-4 0.0 0.0 11.926885934760834 0.0 27 4.8327097124175266E-4 0.0 0.0 12.298762947131364 0.0 28 4.8327097124175266E-4 0.0 0.0 12.6672570627032 0.0 29 6.040887140521909E-4 0.0 0.0 13.057015101009673 0.0 30 6.040887140521909E-4 0.0 0.0 13.511773084948164 0.0 31 7.24906456862629E-4 0.0 0.0 13.934635184784696 0.0 32 7.24906456862629E-4 0.0 0.0 14.355322565250642 0.0 33 7.24906456862629E-4 0.0 0.0 14.760424456894041 0.0 34 7.24906456862629E-4 0.0 0.0 15.150907401657378 0.0 35 7.24906456862629E-4 0.0 0.0 15.549001864217772 0.0 36 7.24906456862629E-4 0.0 0.0 15.938397449295813 0.0 37 7.24906456862629E-4 0.0 0.0 16.338304177998364 0.0 38 7.24906456862629E-4 0.0 0.0 16.729995300189806 0.0 39 7.24906456862629E-4 0.0 0.0 17.159985646852153 1.2081774281043816E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGACGG 30 2.164763E-6 45.000004 2 TATGCGT 20 7.032141E-4 45.0 35 TGCGAAC 20 7.032141E-4 45.0 13 ACTAACG 20 7.032141E-4 45.0 1 TCGTAAG 40 6.8102963E-9 45.0 1 ACTCCGT 20 7.032141E-4 45.0 35 CGTAAGG 110 0.0 42.954544 2 CTAACGG 85 0.0 42.352943 2 CGTTATT 320 0.0 42.1875 1 CCCTCGT 370 0.0 41.959457 14 GCGTAAG 70 0.0 41.785713 1 CGCACGG 65 0.0 41.53846 2 ACGATAG 50 1.0804797E-9 40.5 1 CGTTTTT 2580 0.0 40.2907 1 TATAGCG 45 1.9272193E-8 40.000004 1 TCGTGTA 385 0.0 39.74026 17 GTAACGG 120 0.0 39.375004 2 TTAGGCG 40 3.456662E-7 39.375 1 CGGTTAC 40 3.456662E-7 39.375 29 AGTAACG 40 3.456662E-7 39.375 1 >>END_MODULE