##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935993.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 908985 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13387569651864 33.0 31.0 34.0 30.0 34.0 2 32.253272606258626 34.0 31.0 34.0 30.0 34.0 3 32.153218149914466 34.0 31.0 34.0 30.0 34.0 4 35.80485266533551 37.0 35.0 37.0 35.0 37.0 5 32.167750842973206 37.0 35.0 37.0 0.0 37.0 6 33.92933106706931 37.0 35.0 37.0 17.0 37.0 7 35.547351166410884 37.0 35.0 37.0 32.0 37.0 8 35.80549514018383 37.0 35.0 37.0 35.0 37.0 9 37.77060457543304 39.0 38.0 39.0 35.0 39.0 10 37.35818962909179 39.0 37.0 39.0 34.0 39.0 11 37.300520910686096 39.0 37.0 39.0 34.0 39.0 12 37.305261362948784 39.0 37.0 39.0 34.0 39.0 13 37.3117829227105 39.0 37.0 39.0 34.0 39.0 14 38.60007480871521 40.0 38.0 41.0 35.0 41.0 15 38.723539992409115 40.0 38.0 41.0 35.0 41.0 16 38.63487516295648 40.0 38.0 41.0 35.0 41.0 17 38.61268337761349 40.0 38.0 41.0 35.0 41.0 18 38.49184529997745 40.0 38.0 41.0 34.0 41.0 19 38.333013196037335 40.0 37.0 41.0 34.0 41.0 20 38.37231087421684 40.0 37.0 41.0 34.0 41.0 21 38.28264162774963 40.0 37.0 41.0 34.0 41.0 22 38.32885251131757 40.0 37.0 41.0 34.0 41.0 23 38.346995825013614 40.0 37.0 41.0 34.0 41.0 24 38.317163649565174 40.0 37.0 41.0 34.0 41.0 25 38.024494353592196 40.0 36.0 41.0 34.0 41.0 26 38.09974091981716 40.0 37.0 41.0 34.0 41.0 27 38.07336534706293 40.0 37.0 41.0 34.0 41.0 28 37.95836124908552 40.0 36.0 41.0 34.0 41.0 29 37.87715198820663 40.0 36.0 41.0 33.0 41.0 30 37.71819556978388 40.0 36.0 41.0 33.0 41.0 31 37.684214811025484 40.0 36.0 41.0 33.0 41.0 32 37.58398763455943 40.0 36.0 41.0 33.0 41.0 33 37.438188748989255 40.0 36.0 41.0 33.0 41.0 34 37.28530833842142 40.0 36.0 41.0 32.0 41.0 35 37.21396062641298 40.0 36.0 41.0 32.0 41.0 36 37.09308404429116 40.0 36.0 41.0 32.0 41.0 37 37.045798335506085 40.0 35.0 41.0 32.0 41.0 38 36.912520008581 40.0 35.0 41.0 31.0 41.0 39 36.81870767944466 40.0 35.0 41.0 31.0 41.0 40 36.745160811234506 40.0 35.0 41.0 31.0 41.0 41 36.60854139507253 39.0 35.0 41.0 31.0 41.0 42 36.59787125200086 39.0 35.0 41.0 31.0 41.0 43 36.53620906835646 39.0 35.0 41.0 30.0 41.0 44 36.469780029373425 39.0 35.0 41.0 30.0 41.0 45 36.43950450227452 39.0 35.0 41.0 30.0 41.0 46 36.30833622116977 39.0 35.0 41.0 30.0 41.0 47 36.25578969949999 39.0 35.0 41.0 30.0 41.0 48 36.188508061189125 39.0 35.0 41.0 30.0 41.0 49 36.101320703862 39.0 35.0 41.0 30.0 41.0 50 35.97884233513204 39.0 35.0 41.0 29.0 41.0 51 35.02777933629268 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 9.0 8 14.0 9 39.0 10 38.0 11 28.0 12 24.0 13 16.0 14 42.0 15 60.0 16 75.0 17 141.0 18 254.0 19 477.0 20 784.0 21 1343.0 22 2016.0 23 3009.0 24 4622.0 25 6947.0 26 9340.0 27 10709.0 28 10980.0 29 11457.0 30 12792.0 31 15707.0 32 20086.0 33 28508.0 34 47794.0 35 64729.0 36 66748.0 37 104469.0 38 175972.0 39 309546.0 40 210.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.73193177005121 19.4082410600835 23.49125673140921 15.36857043845608 2 34.808715215322586 23.31259591742438 24.353317161449308 17.525371705803728 3 31.194244129441078 23.63713372607909 28.647777466074796 16.520844678405034 4 28.30156713257094 25.26433329482885 27.75975401134232 18.674345561257887 5 22.711815926555442 36.68861422355704 23.592028471316908 17.007541378570604 6 24.756514133896598 34.27999361925664 26.13211439132659 14.831377855520167 7 79.23046034863061 6.119352904613388 10.515245026045534 4.134941720710462 8 81.08230608865932 5.516702695864068 9.705990747922133 3.6950004675544696 9 75.32918585015155 7.605296016985978 11.670159573590324 5.395358559272155 10 38.39986358410755 28.95988382646578 18.77918777537583 13.861064814050836 11 27.924113159183044 26.705391178072247 27.261946016710947 18.108549646033765 12 25.779523314466136 22.843941319163683 31.503050105337273 19.87348526103291 13 24.57620312766437 23.38168396618206 32.17104792708351 19.87106497907006 14 20.641374720154896 26.744995792009767 31.906577116234043 20.707052371601293 15 20.184931544524936 26.344329114341818 33.97855850206549 19.492180839067753 16 22.92810112378092 25.115375941297163 32.538930785436506 19.417592149485415 17 22.959894827747434 24.34836658470712 30.428224888199473 22.263513699345975 18 23.7728895416316 24.538248705974247 30.742311479287338 20.94655027310682 19 24.333404841664052 26.39460497147918 29.020170849904016 20.251819336952757 20 25.33738180498028 25.27676474309257 29.711601401563282 19.674252050363865 21 24.8636666171609 26.285582270334494 29.85989867819601 18.990852434308596 22 23.039324081255465 24.66311325269394 29.91105463786531 22.386508028185283 23 22.058009758136823 26.406486355660437 30.096646259289205 21.438857626913535 24 22.2087273167324 25.30536807538078 30.616786855668686 21.869117752218134 25 21.996072542451195 26.363251318778637 29.34437862010924 22.296297518660925 26 21.726431129226555 27.57108203105662 28.938541340066116 21.76394549965071 27 22.30289828765051 26.603739335632604 29.528100023652755 21.56526235306413 28 21.688256681903443 26.9188160420689 30.255284740672288 21.13764253535537 29 21.55547121239624 25.835409825244643 30.851884244514487 21.75723471784463 30 22.89949779149271 25.473027607716297 29.578925944872577 22.048548655918417 31 22.877495228194082 27.11298866317926 27.698806911005132 22.310709197621524 32 22.696194106613422 27.310791707233896 28.492769407635986 21.5002447785167 33 22.810937474215745 26.59933882297288 28.879244431976325 21.710479270835055 34 21.368669449990925 27.64292040022663 28.516642188814995 22.471767960967455 35 22.132378422086173 27.425865113285695 28.19496471338911 22.24679175123902 36 22.12489755056464 28.579899558298543 27.682855052613633 21.61234783852319 37 22.158451459595042 28.64678735072636 27.8863787631259 21.308382426552694 38 21.51509650874327 28.227638519887567 28.02444484782477 22.232820123544393 39 22.373636528655588 27.11056838121641 28.553606495156686 21.962188594971312 40 22.515002997849248 27.20561945466647 29.279031007112327 21.000346540371954 41 20.253469529200153 27.983740105722315 29.077597540113427 22.68519282496411 42 21.440947870426903 27.70749792350809 28.439413191636824 22.41214101442818 43 22.46318696128099 26.813533776684984 28.390127449847906 22.33315181218612 44 21.780227396491693 27.057872242116204 28.177472675566705 22.9844276858254 45 21.9240141476482 26.53894178671815 27.774165690302922 23.762878375330725 46 21.52532770067713 27.91102163402036 27.60287573502313 22.960774930279378 47 21.489903573766345 27.418054203314686 28.976825800205724 22.115216422713246 48 21.57439341683306 25.886345759280953 29.42765832219453 23.111602501691447 49 21.672524849144924 26.2262853622447 29.391574118384796 22.70961567022558 50 20.425639587011887 26.634982975516646 29.948679021105956 22.990698416365507 51 20.75886840816955 26.38382371546285 28.289575735573198 24.5677321407944 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 484.0 1 989.0 2 1494.0 3 6966.5 4 12439.0 5 8224.5 6 4010.0 7 3902.0 8 3794.0 9 3801.0 10 3808.0 11 3821.0 12 3834.0 13 3788.0 14 3742.0 15 3644.0 16 3546.0 17 3574.5 18 3603.0 19 3618.0 20 3633.0 21 3907.5 22 4182.0 23 4608.5 24 5035.0 25 5932.5 26 7554.0 27 8278.0 28 10337.5 29 12397.0 30 14153.5 31 15910.0 32 18576.5 33 21243.0 34 24209.5 35 27176.0 36 28883.0 37 30590.0 38 33485.0 39 36380.0 40 39859.0 41 43338.0 42 48045.0 43 52752.0 44 59989.0 45 67226.0 46 69920.5 47 72615.0 48 72724.0 49 72833.0 50 68321.0 51 63809.0 52 60369.0 53 56929.0 54 53872.5 55 50816.0 56 48588.0 57 46360.0 58 43972.0 59 41584.0 60 39525.5 61 37467.0 62 34661.5 63 31856.0 64 26733.5 65 21611.0 66 17744.0 67 13877.0 68 11366.5 69 8856.0 70 7349.0 71 5842.0 72 4728.0 73 3614.0 74 3092.0 75 1952.5 76 1335.0 77 934.5 78 534.0 79 468.5 80 403.0 81 272.5 82 142.0 83 137.5 84 133.0 85 81.5 86 30.0 87 27.0 88 24.0 89 14.5 90 5.0 91 8.0 92 11.0 93 6.5 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 908985.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.65322748984986 #Duplication Level Percentage of deduplicated Percentage of total 1 72.79158379698276 23.040885612723645 2 9.180715487054442 5.811985516626441 3 3.7748788338548325 3.5846129542387852 4 2.1316137210595687 2.6988981613273557 5 1.4294136352057996 2.262277748613122 6 1.0514656132346998 1.9969368152083462 7 0.8205404130811784 1.818092665191174 8 0.6629356118169334 1.6787241385571354 9 0.5930702304143958 1.6895328228688087 >10 7.38414137808984 49.59558187048083 >50 0.14406527419257736 2.8169119758750716 >100 0.032405865952367156 1.6531303165441134 >500 0.0028179013871614646 0.6059731078718166 >1k 0.0 0.0 >5k 3.522376733951831E-4 0.7464562938733785 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6695 0.7365358064214481 No Hit GAATCTGTCTCTTATACACATCTGACGCCGCTAAATTCGTATGCCGTCTTC 979 0.1077025473467659 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.600768989587286E-4 0.0 0.0 0.06644774116184536 0.0 2 6.600768989587286E-4 0.0 0.0 0.28493319471718453 0.0 3 6.600768989587286E-4 0.0 0.0 0.44181147103637575 0.0 4 6.600768989587286E-4 0.0 0.0 0.6445650918331985 0.0 5 6.600768989587286E-4 0.0 0.0 1.2071706353790217 0.0 6 6.600768989587286E-4 0.0 0.0 1.8045402289366712 0.0 7 6.600768989587286E-4 0.0 0.0 2.234800354241269 0.0 8 6.600768989587286E-4 0.0 0.0 2.9124793038388974 0.0 9 6.600768989587286E-4 0.0 0.0 3.2421877148687823 0.0 10 6.600768989587286E-4 0.0 0.0 3.8818022299597903 0.0 11 6.600768989587286E-4 0.0 0.0 4.665203496207308 0.0 12 6.600768989587286E-4 0.0 0.0 5.368185393598354 0.0 13 6.600768989587286E-4 0.0 0.0 5.709995214442483 0.0 14 6.600768989587286E-4 0.0 0.0 5.886785810546929 0.0 15 6.600768989587286E-4 0.0 0.0 6.08700913656441 0.0 16 6.600768989587286E-4 0.0 0.0 6.435639752031111 0.0 17 6.600768989587286E-4 0.0 0.0 6.851378185558618 1.1001281649312145E-4 18 6.600768989587286E-4 0.0 0.0 7.328723796322271 1.1001281649312145E-4 19 6.600768989587286E-4 0.0 0.0 7.634889464622629 1.1001281649312145E-4 20 6.600768989587286E-4 0.0 0.0 7.929063735925236 1.1001281649312145E-4 21 6.600768989587286E-4 0.0 0.0 8.282424902501141 1.1001281649312145E-4 22 6.600768989587286E-4 0.0 0.0 8.663069247567341 1.1001281649312145E-4 23 6.600768989587286E-4 0.0 0.0 9.059445425392058 1.1001281649312145E-4 24 7.700897154518502E-4 0.0 0.0 9.365721106508909 1.1001281649312145E-4 25 7.700897154518502E-4 0.0 0.0 9.667376249333048 1.1001281649312145E-4 26 7.700897154518502E-4 0.0 0.0 9.949889162087382 1.1001281649312145E-4 27 7.700897154518502E-4 0.0 0.0 10.2278915493655 1.1001281649312145E-4 28 7.700897154518502E-4 0.0 0.0 10.537247589344158 1.1001281649312145E-4 29 8.801025319449716E-4 0.0 0.0 10.837362552737394 1.1001281649312145E-4 30 8.801025319449716E-4 0.0 0.0 11.219437064418004 1.1001281649312145E-4 31 9.90115348438093E-4 0.0 0.0 11.549035462631396 1.1001281649312145E-4 32 0.0011001281649312144 0.0 0.0 11.8864447708158 1.1001281649312145E-4 33 0.0012101409814243359 0.0 0.0 12.23782570669483 1.1001281649312145E-4 34 0.0012101409814243359 0.0 0.0 12.608018834194183 1.1001281649312145E-4 35 0.0012101409814243359 0.0 0.0 12.943337898865218 1.1001281649312145E-4 36 0.0012101409814243359 0.0 0.0 13.266775579354995 1.1001281649312145E-4 37 0.0012101409814243359 0.0 0.0 13.610565630896 1.1001281649312145E-4 38 0.0013201537979174573 0.0 0.0 13.945334631484569 1.1001281649312145E-4 39 0.0013201537979174573 0.0 0.0 14.288574618943107 1.1001281649312145E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGCG 30 2.1649976E-6 45.000004 1 CGTTCGG 20 7.032507E-4 45.0 2 GTATACG 25 3.89016E-5 45.0 1 CCGAACA 20 7.032507E-4 45.0 11 CGCAATA 20 7.032507E-4 45.0 30 TATCGAC 20 7.032507E-4 45.0 14 ATCGCGA 20 7.032507E-4 45.0 4 CGTTATT 445 0.0 42.977528 1 CGTTTTT 3205 0.0 41.911076 1 GCGTATG 65 0.0 41.538464 1 TAAACGG 90 0.0 40.0 2 TTACGGG 335 0.0 39.626865 3 CGTATGG 120 0.0 39.375004 2 ACTTGCG 35 6.246846E-6 38.57143 43 ACGGGCG 100 0.0 38.25 5 CGTAAGG 190 0.0 37.894737 2 CACGGTC 30 1.1397338E-4 37.500004 37 CGCATGG 120 0.0 37.500004 2 CGAATAT 90 0.0 37.5 14 TACGGGA 475 0.0 37.42105 4 >>END_MODULE