##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935992.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 827155 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05089372608519 33.0 31.0 34.0 30.0 34.0 2 32.1604233789314 33.0 31.0 34.0 30.0 34.0 3 32.07468733187855 33.0 31.0 34.0 30.0 34.0 4 35.72418591436913 37.0 35.0 37.0 33.0 37.0 5 32.090075016169884 37.0 35.0 37.0 0.0 37.0 6 33.86436157672988 37.0 35.0 37.0 17.0 37.0 7 35.48886967980608 37.0 35.0 37.0 32.0 37.0 8 35.765521576971665 37.0 35.0 37.0 35.0 37.0 9 37.70254063627736 39.0 37.0 39.0 35.0 39.0 10 37.269867195386595 39.0 37.0 39.0 34.0 39.0 11 37.22826918775804 39.0 37.0 39.0 34.0 39.0 12 37.1982844811432 39.0 37.0 39.0 34.0 39.0 13 37.18363063754677 39.0 37.0 39.0 34.0 39.0 14 38.43798562542692 40.0 38.0 41.0 34.0 41.0 15 38.57234738350128 40.0 38.0 41.0 34.0 41.0 16 38.506389975276704 40.0 38.0 41.0 34.0 41.0 17 38.46902333903561 40.0 38.0 41.0 34.0 41.0 18 38.351778082705174 40.0 38.0 41.0 34.0 41.0 19 38.2116918836252 40.0 37.0 41.0 34.0 41.0 20 38.229168656418686 40.0 37.0 41.0 34.0 41.0 21 38.15590306532633 40.0 37.0 41.0 34.0 41.0 22 38.21903512642733 40.0 37.0 41.0 34.0 41.0 23 38.21715760649455 40.0 37.0 41.0 34.0 41.0 24 38.204213236938664 40.0 37.0 41.0 34.0 41.0 25 37.90780567124662 40.0 36.0 41.0 34.0 41.0 26 37.97064879013002 40.0 36.0 41.0 34.0 41.0 27 37.94262018605944 40.0 36.0 41.0 34.0 41.0 28 37.78988218653094 40.0 36.0 41.0 33.0 41.0 29 37.69309379741403 40.0 36.0 41.0 33.0 41.0 30 37.52660142294975 40.0 36.0 41.0 33.0 41.0 31 37.4911159335312 40.0 36.0 41.0 33.0 41.0 32 37.3976570292146 40.0 36.0 41.0 33.0 41.0 33 37.24538327157546 40.0 35.0 41.0 32.0 41.0 34 37.093201395143595 40.0 35.0 41.0 32.0 41.0 35 37.05614667142192 40.0 35.0 41.0 32.0 41.0 36 36.92645272046956 40.0 35.0 41.0 31.0 41.0 37 36.86676983153097 40.0 35.0 41.0 31.0 41.0 38 36.73990243666544 40.0 35.0 41.0 31.0 41.0 39 36.63374700025993 40.0 35.0 41.0 30.0 41.0 40 36.60591303927317 40.0 35.0 41.0 30.0 41.0 41 36.450159885390285 39.0 35.0 41.0 30.0 41.0 42 36.4256070506737 39.0 35.0 41.0 30.0 41.0 43 36.31758618396794 39.0 35.0 41.0 30.0 41.0 44 36.27198409004358 39.0 35.0 41.0 30.0 41.0 45 36.24010977386342 39.0 35.0 41.0 30.0 41.0 46 36.097151078092985 39.0 35.0 41.0 29.0 41.0 47 36.02156790444354 39.0 35.0 41.0 29.0 41.0 48 35.95874654689871 39.0 35.0 41.0 29.0 41.0 49 35.84003602710496 39.0 35.0 41.0 28.0 41.0 50 35.68054838573182 38.0 35.0 41.0 28.0 41.0 51 34.65737739601405 37.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 16.0 9 36.0 10 32.0 11 25.0 12 22.0 13 20.0 14 20.0 15 46.0 16 58.0 17 116.0 18 209.0 19 444.0 20 864.0 21 1425.0 22 2290.0 23 3302.0 24 4881.0 25 6902.0 26 8992.0 27 9927.0 28 10404.0 29 11154.0 30 12609.0 31 15383.0 32 19399.0 33 27939.0 34 47024.0 35 62172.0 36 61279.0 37 93762.0 38 157162.0 39 269068.0 40 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.89462071800328 18.95424678566895 23.489793327731803 14.66133916859597 2 33.45515653051726 23.854416645006076 25.42111212529695 17.26931469917972 3 30.39031378641246 24.1087825135555 28.873911177469765 16.626992522562276 4 27.110396479499006 25.11476083684436 29.47923907852821 18.29560360512842 5 22.38395463969873 36.821756502711104 24.26751938874818 16.526769468841994 6 24.23705351475842 34.73436054911111 26.364587048376663 14.663998887753808 7 78.50608410757354 5.781141382207688 11.356759011309851 4.356015498908911 8 80.62346234986187 5.519038148835466 10.045759259147319 3.8117402421553397 9 74.65807496781134 7.590838476464508 11.620071207935636 6.131015347788503 10 37.896524835127636 29.556733623081527 19.39503478791762 13.151706753873215 11 27.72974835429877 26.204641209930422 28.285508761961182 17.780101673809625 12 24.78132877151199 22.82909490966022 32.90894693255799 19.480629386269804 13 24.354927431980705 23.3725238921363 33.697553662856414 18.57499501302658 14 20.07483482539548 27.462325682610878 32.33178787530753 20.13105161668611 15 19.131118109665056 25.63534041382812 35.91104448380292 19.322496992703908 16 22.234164092582407 25.418694198789826 32.03680084143842 20.310340867189343 17 21.936759132206177 24.79523184892795 30.226257472904113 23.041751545961763 18 23.542020540285677 24.400263553989276 31.529882549219916 20.52783335650513 19 23.56922221349082 26.239822040609074 29.45868670321766 20.732269042682447 20 23.693140946980918 25.58686098736029 30.453300771923036 20.26669729373576 21 23.719496345908567 26.89471743506356 30.588825552647325 18.796960666380546 22 22.417080232846324 24.99652423064601 30.430209573780004 22.156185962727662 23 20.622616075584382 26.062829820287615 30.812604650881635 22.501949453246368 24 20.850747441531514 25.170252250182855 31.41563552175832 22.563364786527313 25 20.71534355713258 27.28110209090195 29.650186482581866 22.35336786938361 26 20.445744751588276 26.452720469561324 30.133046406054486 22.96848837279591 27 21.832304707098427 25.73217837043843 30.29456389673036 22.14095302573278 28 20.206732716359085 26.775150969286287 31.8517085673181 21.166407747036526 29 21.944617393354328 25.069303818510434 30.89626490802812 22.089813880107116 30 22.63965036782707 25.682006395415613 30.315599857342335 21.362743379414983 31 22.585851503043568 27.29029021162902 28.50324304392768 21.620615241399737 32 23.239296141593776 26.89628908729319 28.510859512425117 21.353555258687912 33 22.14095302573278 26.767050915487424 28.60890643228899 22.483089626490802 34 21.449063355719304 26.406779865925976 29.92002708077688 22.22412969757784 35 21.92370232906771 26.362290018194894 29.264768997346323 22.449238655391067 36 22.169484558516846 28.83365270112615 28.55945983521831 20.4374029051387 37 21.36661206182638 28.88406646879968 28.744310316687926 21.005011152686016 38 20.523239296141593 28.01542637111545 27.731320006528403 23.730014326214555 39 21.675381276786094 26.306315019554983 28.755795467596762 23.262508236062164 40 22.48405679709365 24.537964468569978 30.684454546004076 22.293524188332295 41 20.479837515338723 26.284916369966936 29.773017149143755 23.46222896555059 42 21.82021507456281 26.76644643386064 29.41625209301763 21.997086398558917 43 21.47711130320194 26.639988877538066 29.0015776970459 22.881322122214094 44 21.08516541639717 26.381028948625108 28.443520259201723 24.090285375776002 45 21.408079501423554 25.33116525923195 28.375818317002256 24.884936922342245 46 21.96746679884665 26.852403721188896 28.214784411627807 22.96534506833665 47 20.744721364194135 25.917754229860186 30.329744727409008 23.00777967853667 48 20.70615543640551 25.951363408309202 29.90636579601163 23.436115359273654 49 21.436611034207615 24.899565377710346 30.74200119687362 22.92182239120842 50 20.348665002327255 25.29030230126155 30.32599694132297 24.035035755088224 51 20.40210117813469 24.832467917137656 29.102042543416896 25.66338836131076 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 408.0 1 875.0 2 1342.0 3 6373.5 4 11405.0 5 7516.0 6 3627.0 7 3510.0 8 3393.0 9 3399.0 10 3405.0 11 3344.5 12 3284.0 13 3245.5 14 3207.0 15 3172.5 16 3138.0 17 3148.5 18 3159.0 19 3231.5 20 3304.0 21 3543.0 22 3782.0 23 4004.0 24 4226.0 25 5128.0 26 7214.0 27 8398.0 28 9619.5 29 10841.0 30 12829.5 31 14818.0 32 17463.0 33 20108.0 34 21895.5 35 23683.0 36 25834.5 37 27986.0 38 29909.5 39 31833.0 40 36047.0 41 40261.0 42 43735.5 43 47210.0 44 53009.0 45 58808.0 46 66596.5 47 74385.0 48 74415.0 49 74445.0 50 72699.5 51 70954.0 52 63382.0 53 55810.0 54 49851.5 55 43893.0 56 41028.5 57 38164.0 58 35565.5 59 32967.0 60 30572.0 61 28177.0 62 26206.0 63 24235.0 64 20530.5 65 16826.0 66 14000.0 67 11174.0 68 8895.0 69 6616.0 70 5593.0 71 4570.0 72 3815.0 73 3060.0 74 2470.5 75 1531.5 76 1182.0 77 929.5 78 677.0 79 483.5 80 290.0 81 201.0 82 112.0 83 77.0 84 42.0 85 31.0 86 20.0 87 14.5 88 9.0 89 6.5 90 4.0 91 3.5 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 827155.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.93523683137112 #Duplication Level Percentage of deduplicated Percentage of total 1 74.67447889168966 25.34096126448712 2 9.359465449417902 6.352313532820637 3 3.676883633204912 3.74327750682603 4 1.985581103124348 2.6952465992967953 5 1.2910271739761832 2.1905656452308775 6 0.9775355131451717 1.9903739489794379 7 0.7247744531368298 1.7216774901568068 8 0.6080420172996575 1.6507239888390823 9 0.45483464175305754 1.3891429158301662 >10 6.045914305691427 45.360559611922824 >50 0.16312339772523413 3.3728072249596535 >100 0.03399910815608436 1.9970002021163402 >500 0.0021701558397500473 0.518090833013708 >1k 0.001808463199791706 0.9032528879762797 >5k 3.6169263995834114E-4 0.7740063475442887 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6306 0.7623722276961392 No Hit GAATCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTC 2011 0.24312251029129972 No Hit GCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 1581 0.19113709038813764 TruSeq Adapter, Index 23 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCG 1445 0.1746951901396957 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGC 1284 0.15523088175734898 No Hit CCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGC 1038 0.12549038571972607 TruSeq Adapter, Index 23 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCCGTCTTCTGCT 902 0.1090484854712841 TruSeq Adapter, Index 20 (95% over 24bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGACCTTATCGTATGCC 886 0.10711414426558503 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.417926507123816E-4 0.0 0.0 0.11618136866729936 0.0 2 2.417926507123816E-4 0.0 0.0 0.5393185074139671 0.0 3 2.417926507123816E-4 0.0 0.0 0.7711976594471411 0.0 4 2.417926507123816E-4 0.0 0.0 1.0653384190387534 0.0 5 2.417926507123816E-4 1.208963253561908E-4 0.0 1.9640817017366756 0.0 6 2.417926507123816E-4 1.208963253561908E-4 0.0 2.7138807115957713 0.0 7 2.417926507123816E-4 1.208963253561908E-4 0.0 3.308086150721449 0.0 8 2.417926507123816E-4 1.208963253561908E-4 0.0 4.21130259745755 0.0 9 2.417926507123816E-4 1.208963253561908E-4 0.0 4.582937901602481 0.0 10 2.417926507123816E-4 1.208963253561908E-4 0.0 5.562198136987626 0.0 11 2.417926507123816E-4 1.208963253561908E-4 0.0 6.6327350980166955 0.0 12 2.417926507123816E-4 1.208963253561908E-4 0.0 7.6329103976884625 0.0 13 3.626889760685724E-4 1.208963253561908E-4 0.0 8.047705689985554 0.0 14 3.626889760685724E-4 1.208963253561908E-4 0.0 8.241018914230102 0.0 15 3.626889760685724E-4 1.208963253561908E-4 0.0 8.505298281458735 0.0 16 3.626889760685724E-4 1.208963253561908E-4 0.0 9.019349456873258 0.0 17 3.626889760685724E-4 1.208963253561908E-4 0.0 9.668925413012072 0.0 18 3.626889760685724E-4 1.208963253561908E-4 0.0 10.425494617091113 0.0 19 3.626889760685724E-4 1.208963253561908E-4 0.0 10.87692149597113 0.0 20 3.626889760685724E-4 1.208963253561908E-4 0.0 11.296189952306399 0.0 21 3.626889760685724E-4 1.208963253561908E-4 0.0 11.78461110674541 0.0 22 3.626889760685724E-4 1.208963253561908E-4 0.0 12.340492410733177 0.0 23 3.626889760685724E-4 1.208963253561908E-4 0.0 12.914387267199013 0.0 24 3.626889760685724E-4 1.208963253561908E-4 0.0 13.34260205161064 0.0 25 3.626889760685724E-4 1.208963253561908E-4 0.0 13.747846534204593 0.0 26 4.835853014247632E-4 1.208963253561908E-4 0.0 14.145232755650392 0.0 27 4.835853014247632E-4 1.208963253561908E-4 0.0 14.53089203353664 0.0 28 4.835853014247632E-4 1.208963253561908E-4 0.0 14.940851472819483 0.0 29 4.835853014247632E-4 1.208963253561908E-4 0.0 15.350085534150189 0.0 30 6.04481626780954E-4 1.208963253561908E-4 0.0 15.838143999613132 0.0 31 7.253779521371448E-4 1.208963253561908E-4 0.0 16.26889760685724 0.0 32 7.253779521371448E-4 1.208963253561908E-4 0.0 16.694210879460318 0.0 33 7.253779521371448E-4 1.208963253561908E-4 0.0 17.127503309536905 0.0 34 7.253779521371448E-4 1.208963253561908E-4 0.0 17.552212100513206 0.0 35 7.253779521371448E-4 1.208963253561908E-4 0.0 17.97728358046557 0.0 36 7.253779521371448E-4 1.208963253561908E-4 0.0 18.382528063059524 0.0 37 8.462742774933355E-4 1.208963253561908E-4 0.0 18.79490542884949 0.0 38 9.671706028495264E-4 1.208963253561908E-4 0.0 19.225538139768243 0.0 39 9.671706028495264E-4 1.208963253561908E-4 0.0 19.678053085576465 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCACGG 65 0.0 45.000004 2 TCGATAG 20 7.032138E-4 45.000004 1 GCGTAGC 20 7.032138E-4 45.000004 21 AAGTACG 25 3.8898546E-5 45.0 1 CGTATGG 50 2.1827873E-11 45.0 2 ACGCTAG 25 3.8898546E-5 45.0 1 GTACGAG 25 3.8898546E-5 45.0 1 TATCCGG 35 1.2113742E-7 45.0 2 CGAATAT 90 0.0 42.5 14 CGTTATT 465 0.0 42.096775 1 CGTAAGG 155 0.0 42.09677 2 CGTTTTT 3230 0.0 41.30805 1 CATACGG 50 1.0804797E-9 40.5 2 TATAGCG 50 1.0804797E-9 40.5 1 TACGGGA 490 0.0 39.94898 4 TTGTCGC 40 3.456662E-7 39.375004 38 ACGGGAG 430 0.0 38.720932 5 CTAACGG 70 0.0 38.571426 2 ATAGCGG 135 0.0 38.333332 2 GCTACGA 100 0.0 38.25 10 >>END_MODULE