##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935989.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 764681 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.91049993395939 33.0 31.0 34.0 30.0 34.0 2 32.082464452497184 33.0 31.0 34.0 30.0 34.0 3 31.88333435772564 33.0 31.0 34.0 30.0 34.0 4 35.64938320685358 37.0 35.0 37.0 33.0 37.0 5 32.09030432297912 37.0 35.0 37.0 0.0 37.0 6 33.83382613141951 37.0 35.0 37.0 17.0 37.0 7 35.43914128898194 37.0 35.0 37.0 32.0 37.0 8 35.62356590525984 37.0 35.0 37.0 33.0 37.0 9 37.590663296198024 39.0 37.0 39.0 35.0 39.0 10 37.28562106290074 39.0 37.0 39.0 34.0 39.0 11 37.22077441442902 39.0 37.0 39.0 34.0 39.0 12 37.25360902127815 39.0 37.0 39.0 34.0 39.0 13 37.1759975728441 39.0 37.0 39.0 33.0 39.0 14 38.489717934668185 40.0 38.0 41.0 34.0 41.0 15 38.53746464211874 40.0 38.0 41.0 34.0 41.0 16 38.58752473253553 40.0 38.0 41.0 34.0 41.0 17 38.435531940770076 40.0 38.0 41.0 34.0 41.0 18 38.22800357273164 40.0 38.0 41.0 34.0 41.0 19 37.89557214053965 39.0 37.0 41.0 34.0 41.0 20 37.51242413503147 39.0 35.0 41.0 33.0 41.0 21 37.629165625927676 39.0 35.0 41.0 33.0 41.0 22 37.64257644691054 39.0 35.0 41.0 33.0 41.0 23 37.525105239962805 39.0 35.0 41.0 33.0 41.0 24 37.53350874416914 39.0 35.0 41.0 33.0 41.0 25 37.43670497893893 39.0 35.0 41.0 33.0 41.0 26 37.34033799715176 39.0 35.0 41.0 33.0 41.0 27 37.2474692061134 39.0 35.0 41.0 33.0 41.0 28 37.181382824995 39.0 35.0 41.0 33.0 41.0 29 37.115237595807926 39.0 35.0 41.0 33.0 41.0 30 36.87500408667144 39.0 35.0 41.0 32.0 41.0 31 36.67752696876214 39.0 35.0 41.0 31.0 41.0 32 36.11681341631347 39.0 35.0 41.0 29.0 41.0 33 35.63025627680039 39.0 35.0 41.0 24.0 41.0 34 35.060391195805835 39.0 35.0 41.0 20.0 41.0 35 34.84638561700892 39.0 35.0 41.0 18.0 41.0 36 34.545875992734224 39.0 35.0 41.0 15.0 41.0 37 34.312955336931346 39.0 35.0 41.0 12.0 41.0 38 34.29147317639643 39.0 35.0 41.0 15.0 41.0 39 34.126426575264716 39.0 34.0 41.0 12.0 41.0 40 34.1852968754291 39.0 34.0 41.0 15.0 41.0 41 34.04826718592459 39.0 34.0 41.0 15.0 41.0 42 33.88804089548452 39.0 34.0 41.0 11.0 41.0 43 33.77303607648157 39.0 34.0 41.0 10.0 41.0 44 33.78410605206616 38.0 34.0 41.0 11.0 41.0 45 33.85368539299394 38.0 34.0 41.0 11.0 41.0 46 33.73197058642754 38.0 34.0 41.0 11.0 41.0 47 33.510063673610304 38.0 33.0 40.0 10.0 41.0 48 33.557595912543924 38.0 33.0 40.0 10.0 41.0 49 33.534030530378026 38.0 33.0 40.0 10.0 41.0 50 33.39693806960027 38.0 33.0 40.0 10.0 41.0 51 32.56125757015017 37.0 31.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 15.0 10 19.0 11 10.0 12 11.0 13 14.0 14 21.0 15 26.0 16 70.0 17 133.0 18 404.0 19 842.0 20 1807.0 21 3758.0 22 6152.0 23 8548.0 24 11327.0 25 16185.0 26 20589.0 27 20374.0 28 17232.0 29 14803.0 30 14141.0 31 15623.0 32 18950.0 33 24715.0 34 37085.0 35 51187.0 36 52114.0 37 75316.0 38 128232.0 39 224792.0 40 179.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.08837541406155 16.185180487026614 20.096746224896396 22.629697874015438 2 37.61071610253165 27.762949517511228 20.767744981240543 13.858589398716589 3 24.209049263679887 27.600921168434944 35.26307048298571 12.926959084899456 4 21.436259041351885 20.481481820523854 43.21880627346567 14.863452864658596 5 23.87178444344766 31.106173685497613 30.492846036451805 14.529195834602927 6 19.27941193778844 33.90158772089276 34.131356735684555 12.687643605634245 7 66.44796980701757 3.7603915881262906 26.366811781644895 3.4248268232112475 8 67.37672310414408 9.479116128163247 19.592745210094144 3.551415557598528 9 62.75636507249428 5.507002266304512 20.372155186280292 11.364477474920914 10 33.21725006898301 27.90366178837973 27.138898442618558 11.740189700018702 11 24.367285181663988 20.919180677955907 38.27556850503674 16.437965635343367 12 19.757258255403233 19.11869132357153 40.059449626707085 21.064600794318153 13 21.332686440489564 21.412196719939423 41.93016434303978 15.324952496531234 14 16.48033624478704 28.53464385802707 37.08029884357006 17.90472105361582 15 14.483294341038944 23.384391661359444 43.10411792629868 19.028196071302936 16 17.19841345606861 23.95443328656002 37.49458924701934 21.35256401035203 17 17.546270928661755 25.832994412048947 38.53685392993941 18.083880729349886 18 18.32973488291196 22.442822562611077 38.47264414834421 20.754798406132753 19 17.175658869515523 24.948311779683294 36.3478365488354 21.528192801965787 20 21.107102177247768 24.04061301379268 39.21766069772886 15.634624111230696 21 17.877389395054934 28.87870889952804 37.78712953506103 15.456772170356004 22 17.164020029267107 21.436651361809698 40.79544280556206 20.60388580336114 23 18.316003666888545 25.888050049628536 38.25686789654771 17.539078386935206 24 17.088040633937553 25.294469196959255 38.33559353508195 19.281896634021244 25 15.70641875501026 30.63630455052499 35.87835973432058 17.778916960144166 26 16.636479786996148 24.124700365250344 40.047680012972734 19.191139834780778 27 20.785399401842074 23.921739915075698 36.01854891124534 19.27431177183688 28 15.82999969922098 26.235253654791997 39.21609141589761 18.71865523008941 29 18.433307483774282 21.69636750488112 40.83611335968855 19.03421165165605 30 19.144846020758983 26.27487802103099 37.35400774963678 17.22626820857325 31 20.878379350343476 23.486918074334266 34.595079516818124 21.039623058504134 32 22.443999523984512 25.929505244670654 34.291292708985836 17.335202522358998 33 21.405396498670687 23.28291143627212 33.00958177331462 22.30211029174257 34 19.400769732738226 23.542889126315416 36.34744422837758 20.70889691256877 35 23.386353263648502 24.32020672672657 32.74659629309477 19.54684371653016 36 23.2568875125706 26.118996025793763 32.29869710375961 18.32541935787603 37 21.129202896371165 26.261800672437264 33.71248926022747 18.896507170964103 38 20.633440611182962 25.88569612688167 30.50775421384865 22.97310904808672 39 19.959957158606006 27.168714797412253 33.4901743341341 19.381153709847638 40 21.6349039664906 23.832813944638353 32.847030330294594 21.685251758576452 41 20.960635872998022 24.75947486598987 32.10397538319901 22.175913877813098 42 22.071164315577345 24.38833971289989 33.33115377523438 20.20934219628839 43 22.651537046166965 24.809953431561656 30.93551428634947 21.602995235921906 44 21.033345931179145 24.462226732454447 32.486749376537404 22.017677959829 45 20.060914289749583 24.11881555838317 31.771026088002706 24.04924406386454 46 22.75576351445897 26.691130026769333 30.85848870313242 19.69461775563928 47 18.633521690744246 25.76420755844594 35.49715502281344 20.10511572799638 48 20.4542809354489 25.387579918946596 32.682386511499566 21.475752634104943 49 20.28401385675857 23.39079956217037 35.32518788880592 20.99999869226514 50 20.151278768532237 23.893754389085125 33.558699640765234 22.396267201617405 51 19.51571962687709 22.687892075257526 32.60902258588876 25.18736571197663 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 421.0 1 667.0 2 913.0 3 15696.0 4 30479.0 5 20216.0 6 9953.0 7 9720.0 8 9487.0 9 9430.5 10 9374.0 11 9228.5 12 9083.0 13 8854.0 14 8625.0 15 8261.0 16 7897.0 17 7525.5 18 7154.0 19 6795.5 20 6437.0 21 5984.5 22 5532.0 23 5890.0 24 6248.0 25 6680.5 26 8250.0 27 9387.0 28 10146.0 29 10905.0 30 12562.0 31 14219.0 32 16019.5 33 17820.0 34 20700.0 35 23580.0 36 24728.0 37 25876.0 38 28022.0 39 30168.0 40 32171.0 41 34174.0 42 36559.0 43 38944.0 44 40995.0 45 43046.0 46 47808.0 47 52570.0 48 73054.0 49 93538.0 50 76975.5 51 60413.0 52 58385.0 53 56357.0 54 48656.5 55 40956.0 56 36624.0 57 32292.0 58 26260.0 59 20228.0 60 17259.0 61 14290.0 62 11976.5 63 9663.0 64 8102.0 65 6541.0 66 5321.5 67 4102.0 68 3392.5 69 2683.0 70 2255.0 71 1827.0 72 1371.0 73 915.0 74 861.0 75 609.5 76 412.0 77 307.0 78 202.0 79 114.0 80 26.0 81 17.5 82 9.0 83 8.0 84 7.0 85 6.5 86 6.0 87 3.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 764681.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.32629365950114 #Duplication Level Percentage of deduplicated Percentage of total 1 77.74859985304437 29.798156695828254 2 8.71457729648611 6.679948971670964 3 3.3442864558277274 3.845223143626373 4 1.8706290725719117 2.8677711665356544 5 1.2243195330496126 2.3461814978361377 6 0.8747920290991779 2.0116521718947578 7 0.6668174045143561 1.78896477638785 8 0.5361527353032012 1.6438997743660217 9 0.44058534397196153 1.5197402947627547 >10 4.46317366708929 33.96509245841816 >50 0.08003399199497567 1.9859795536460916 >100 0.02771739772873176 1.9988598805055384 >500 0.003464674716091443 1.0528771668457015 >1k 0.003464674716091443 2.382219242428035 >5k 6.929349432182887E-4 2.3342827236701464 >10k+ 6.929349432182887E-4 3.7791504815775845 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17651 2.308282800278809 No Hit GAATCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTC 10809 1.4135306094959859 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCG 9826 1.2849802728196464 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGC 7753 1.013886836471679 No Hit GAACTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCT 3369 0.44057587412267335 No Hit GCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTGC 2944 0.38499714259933226 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCT 2153 0.2815553152229492 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1938 0.25343901574643546 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTC 1550 0.20269890320277345 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGGACTGGT 1438 0.18805227277779885 No Hit GAATGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTT 1259 0.16464381879502696 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGGACTGGTCGTA 1255 0.16412072485127785 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTT 1024 0.13391204959976774 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCG 1010 0.13208122079664592 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCC 980 0.1281580162185277 No Hit GAATATGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTC 877 0.11468834716698859 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGAGCACCGGTCGAATGC 869 0.1136421592794904 No Hit CGCTGTCTCTTATACACATCTGACGCTGGACTGGTCGTATGCCGTCTTCTG 841 0.10998050167324676 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 781 0.10213409251701036 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.230939437490927E-4 0.0 0.0 0.09141066667015396 0.0 2 5.230939437490927E-4 0.0 0.0 0.6495519046504359 0.0 3 5.230939437490927E-4 0.0 0.0 0.8889981574015832 0.0 4 5.230939437490927E-4 0.0 0.0 1.553327465962931 0.0 5 5.230939437490927E-4 0.0 0.0 3.56475445316413 0.0 6 5.230939437490927E-4 0.0 0.0 4.476768744090673 0.0 7 5.230939437490927E-4 0.0 0.0 5.365636128006319 0.0 8 5.230939437490927E-4 0.0 0.0 6.371545781835825 0.0 9 5.230939437490927E-4 0.0 0.0 6.784920770883545 0.0 10 5.230939437490927E-4 0.0 0.0 8.930521354656387 0.0 11 5.230939437490927E-4 0.0 0.0 9.852474430514162 0.0 12 5.230939437490927E-4 0.0 0.0 11.710634892196877 0.0 13 5.230939437490927E-4 0.0 0.0 12.14114120790238 0.0 14 5.230939437490927E-4 0.0 0.0 12.360971437762936 0.0 15 5.230939437490927E-4 0.0 0.0 12.761138304730993 0.0 16 6.53867429686366E-4 0.0 0.0 13.180005780188079 0.0 17 6.53867429686366E-4 0.0 0.0 13.684529888934078 0.0 18 6.53867429686366E-4 0.0 0.0 14.203569854619115 0.0 19 7.846409156236392E-4 0.0 0.0 14.799243083063395 0.0 20 9.154144015609124E-4 0.0 0.0 15.188163430240845 0.0 21 9.154144015609124E-4 0.0 0.0 15.606507811754183 0.0 22 0.0010461878874981855 0.0 0.0 16.129470982017338 0.0 23 0.0011769613734354588 0.0 0.0 16.59267066920716 0.0 24 0.0011769613734354588 0.0 0.0 16.95046692673154 0.0 25 0.0011769613734354588 0.0 0.0 17.26693876269974 0.0 26 0.0011769613734354588 0.0 0.0 17.596749494233542 0.0 27 0.001307734859372732 0.0 0.0 17.96226138742822 0.0 28 0.001307734859372732 0.0 0.0 18.29756460537139 0.0 29 0.001307734859372732 0.0 0.0 18.67549997973011 0.0 30 0.001307734859372732 0.0 0.0 19.154392485232403 0.0 31 0.001307734859372732 0.0 0.0 19.541874324064544 0.0 32 0.001307734859372732 0.0 0.0 19.92190207419826 0.0 33 0.001307734859372732 0.0 0.0 20.289375569681997 0.0 34 0.001438508345310005 0.0 0.0 20.64089469988139 0.0 35 0.001438508345310005 0.0 0.0 21.006929687019817 0.0 36 0.0015692818312472783 0.0 0.0 21.33007097077082 0.0 37 0.0015692818312472783 0.0 0.0 21.686167172978013 0.0 38 0.0015692818312472783 0.0 0.0 22.055863817722685 0.0 39 0.0015692818312472783 0.0 0.0 22.479308365187574 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAACC 115 0.0 45.000004 33 ATTACGG 35 1.2112105E-7 45.000004 2 ACCCGCC 35 1.2112105E-7 45.000004 39 TCACGCC 20 7.031804E-4 45.0 13 GAGTACG 20 7.031804E-4 45.0 1 CCGTGGT 25 3.889577E-5 45.0 33 CGACCCA 25 3.889577E-5 45.0 34 ATATGCG 20 7.031804E-4 45.0 1 CCGTCGA 40 6.8102963E-9 45.0 41 CGCCTTG 20 7.031804E-4 45.0 41 ATATCCG 20 7.031804E-4 45.0 18 CTTTGCG 25 3.889577E-5 45.0 1 AGCGACG 20 7.031804E-4 45.0 1 CGGTCGA 285 0.0 45.0 41 CGATCGC 20 7.031804E-4 45.0 10 TCGACGG 20 7.031804E-4 45.0 2 TCGCGTC 20 7.031804E-4 45.0 1 TCGCGAG 20 7.031804E-4 45.0 1 TATCCGC 20 7.031804E-4 45.0 19 ACCGGTC 335 0.0 44.328354 39 >>END_MODULE