##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935988.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 457631 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.909092696954534 33.0 31.0 34.0 30.0 34.0 2 32.029233159466905 33.0 31.0 34.0 30.0 34.0 3 31.954933122974623 33.0 31.0 34.0 30.0 34.0 4 35.65215206137696 37.0 35.0 37.0 33.0 37.0 5 32.065681739217844 37.0 35.0 37.0 0.0 37.0 6 33.80848325397537 37.0 35.0 37.0 17.0 37.0 7 35.41823434164206 37.0 35.0 37.0 32.0 37.0 8 35.649752748393354 37.0 35.0 37.0 33.0 37.0 9 37.571720447259914 39.0 37.0 39.0 35.0 39.0 10 37.151626528797216 39.0 37.0 39.0 34.0 39.0 11 37.16196018189327 39.0 37.0 39.0 34.0 39.0 12 37.12380935732064 39.0 37.0 39.0 34.0 39.0 13 37.026029705155466 39.0 37.0 39.0 33.0 39.0 14 38.215033509530606 40.0 37.0 41.0 33.0 41.0 15 38.340708999171824 40.0 37.0 41.0 34.0 41.0 16 38.318492409823634 40.0 37.0 41.0 34.0 41.0 17 38.28547672688258 40.0 37.0 41.0 34.0 41.0 18 38.1774333469542 40.0 37.0 41.0 34.0 41.0 19 37.99548763086417 40.0 37.0 41.0 34.0 41.0 20 37.93151469196798 40.0 36.0 41.0 34.0 41.0 21 37.93672631443237 40.0 36.0 41.0 34.0 41.0 22 37.96481444657377 40.0 36.0 41.0 34.0 41.0 23 37.95723191829225 40.0 36.0 41.0 34.0 41.0 24 37.91265233343021 40.0 36.0 41.0 34.0 41.0 25 37.69332497142894 40.0 35.0 41.0 33.0 41.0 26 37.70266437369846 40.0 35.0 41.0 33.0 41.0 27 37.66673804877729 40.0 35.0 41.0 33.0 41.0 28 37.61423286446941 40.0 35.0 41.0 33.0 41.0 29 37.57003568377142 40.0 35.0 41.0 33.0 41.0 30 37.406493441222295 40.0 35.0 41.0 33.0 41.0 31 37.35560965057 40.0 35.0 41.0 33.0 41.0 32 37.157773402588546 40.0 35.0 41.0 32.0 41.0 33 36.983220105281326 40.0 35.0 41.0 32.0 41.0 34 36.816515926587144 40.0 35.0 41.0 31.0 41.0 35 36.710552825311225 40.0 35.0 41.0 31.0 41.0 36 36.50864124152429 40.0 35.0 41.0 30.0 41.0 37 36.45844796353394 39.0 35.0 41.0 30.0 41.0 38 36.32934831774946 39.0 35.0 41.0 30.0 41.0 39 36.23828805303837 39.0 35.0 41.0 30.0 41.0 40 36.17130395449609 39.0 35.0 41.0 29.0 41.0 41 36.075598025483416 39.0 35.0 41.0 29.0 41.0 42 36.02321521050803 39.0 35.0 41.0 29.0 41.0 43 35.93183809663244 39.0 35.0 41.0 29.0 41.0 44 35.90484910331686 39.0 35.0 41.0 29.0 41.0 45 35.896163065876216 39.0 35.0 41.0 29.0 41.0 46 35.773966361544566 39.0 35.0 41.0 28.0 41.0 47 35.645061195592085 39.0 35.0 41.0 27.0 41.0 48 35.62379296857075 38.0 35.0 41.0 27.0 41.0 49 35.6138439048054 38.0 35.0 41.0 27.0 41.0 50 35.482578758869046 38.0 35.0 40.0 27.0 41.0 51 34.5309561633718 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 12.0 9 16.0 10 13.0 11 14.0 12 15.0 13 8.0 14 16.0 15 20.0 16 23.0 17 44.0 18 133.0 19 271.0 20 540.0 21 946.0 22 1590.0 23 2254.0 24 3237.0 25 4572.0 26 5533.0 27 6180.0 28 6198.0 29 6521.0 30 7354.0 31 9257.0 32 11617.0 33 16770.0 34 27476.0 35 37832.0 36 34665.0 37 52032.0 38 84872.0 39 137492.0 40 103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.40534404356348 18.702622855532077 23.637166188479362 15.254866912425078 2 31.997832314681478 26.90071258284513 24.063055168902455 17.038399933570933 3 27.4511560624171 26.701643900872103 29.349847366109376 16.497352670601423 4 25.850958523351785 23.785320487466976 32.28627431271046 18.07744667647078 5 22.88000594365329 34.73387947931849 25.082435411936693 17.303679165091527 6 22.78713636095457 34.23915774936576 28.09862094132609 14.875084948353587 7 73.39734414845148 5.5577528620220225 15.975534874167177 5.0693681153593175 8 74.69511462291672 7.279882700254135 12.844409578896535 5.180593097932614 9 69.18325026058112 6.297650290299389 14.847988881872077 9.67111056724741 10 37.76142787529691 23.29737277413462 23.2464583911492 15.69474095941927 11 27.738505477120214 23.475463856250997 28.938817518918082 19.84721314771071 12 24.646276148250447 20.134781079078994 33.87598305184745 21.34295972082311 13 22.972657009686845 23.489885956152445 35.51551359064399 18.02194344351672 14 18.354744324575915 28.59050195463157 32.624319593733816 20.4304341270587 15 16.67850298603023 24.09146233537501 38.78015256833562 20.44988211025914 16 18.80357755484222 23.39810895677959 34.163988016546085 23.63432547183211 17 19.293710434826313 24.578973015377017 31.63575020048904 24.491566349307632 18 20.449663593593964 24.137787868391783 33.61638525362137 21.796163284392883 19 20.80628279115707 26.20670365425419 29.97043469520203 23.016578859386712 20 21.87024043388669 25.730774357506377 32.008758147940156 20.39022706066678 21 21.296852704471505 27.756423843664436 31.664157366961593 19.282566084902463 22 19.250225618456792 24.289875467352516 31.34293786915659 25.1169610450341 23 18.543542723285793 27.206854430753165 31.190631753530685 23.058971092430365 24 19.802198714684977 25.448887859432602 32.35576261223562 22.393150813646802 25 18.61150140615474 28.07829889146496 30.258002626570313 23.052197075809985 26 17.710775712309697 26.158629987916026 31.840500315756582 24.29009398401769 27 19.862727830938027 26.586704134990857 30.099578044319554 23.45098998975157 28 17.007589083781475 25.413269643009322 33.96295268458649 23.616188588622713 29 18.146279426000426 23.786850104123193 32.43508416169359 25.63178630818279 30 18.95916142044573 25.724000340886 31.634657617163175 23.6821806215051 31 20.487904009999323 25.177490161287153 29.383498932546093 24.951106896167435 32 21.882914400466753 27.322886779960275 27.840334243091046 22.953864576481926 33 20.59235497595224 23.871416053545325 30.244017559999214 25.292211410503224 34 18.702404338866906 24.610876448492345 30.099141010989207 26.587578201651553 35 20.70620215850762 24.085125352084976 28.672227187406445 26.536445302000956 36 20.41273427717965 23.887804803433337 31.734956766477794 23.96450415290922 37 18.427291857413504 26.126945071465872 31.561891567660403 23.88387150346021 38 18.83132917131925 26.900275549514785 30.539452091313745 23.728943187852224 39 19.026901586649505 26.042160605378566 31.08924002089019 23.84169778708173 40 21.557324569358283 23.071426542345254 31.332012035897915 24.03923685239855 41 19.6380926991397 23.38696460685574 29.63588568082145 27.33905701318311 42 20.876208124012578 23.848908837032457 31.19915390347245 24.07572913548252 43 20.808030924478455 23.896763986705448 30.572666624420116 24.72253846439599 44 19.83650583111721 24.21645386785423 30.5068931082029 25.440147192825663 45 19.517034466633596 24.200065117966222 28.7071898538342 27.57571056156598 46 22.287607264368017 25.342907276823468 29.270088783321057 23.099396675487455 47 18.666349089113282 23.87622342017914 33.459490288026814 23.997937202680763 48 19.599633766069168 23.79187598742218 30.788998122941848 25.819492123566807 49 19.87168701421014 21.981683933125158 34.270624149150734 23.876004903513966 50 19.571008082931446 22.121534598836178 32.28955206268806 26.017905255544317 51 18.930754253973177 22.119786465514792 29.65795586400397 29.291503416508057 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 426.0 1 586.5 2 747.0 3 4038.5 4 7330.0 5 4834.5 6 2339.0 7 2303.0 8 2267.0 9 2249.0 10 2231.0 11 2258.5 12 2286.0 13 2182.5 14 2079.0 15 2117.5 16 2156.0 17 2003.5 18 1851.0 19 2003.0 20 2155.0 21 2023.5 22 1892.0 23 2069.0 24 2246.0 25 2508.5 26 3306.0 27 3841.0 28 4053.5 29 4266.0 30 5279.0 31 6292.0 32 7182.5 33 8073.0 34 9456.0 35 10839.0 36 11943.0 37 13047.0 38 14658.0 39 16269.0 40 18017.0 41 19765.0 42 22785.5 43 25806.0 44 30525.0 45 35244.0 46 44188.5 47 53133.0 48 51083.5 49 49034.0 50 47193.0 51 45352.0 52 38495.0 53 31638.0 54 28110.5 55 24583.0 56 21766.0 57 18949.0 58 17041.0 59 15133.0 60 13822.0 61 12511.0 62 11610.0 63 10709.0 64 8940.0 65 7171.0 66 5806.5 67 4442.0 68 3746.0 69 3050.0 70 2647.5 71 2245.0 72 1851.5 73 1458.0 74 1266.0 75 765.5 76 457.0 77 343.0 78 229.0 79 202.5 80 176.0 81 107.5 82 39.0 83 26.5 84 14.0 85 7.5 86 1.0 87 3.0 88 5.0 89 7.0 90 9.0 91 4.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 457631.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.56206029327493 #Duplication Level Percentage of deduplicated Percentage of total 1 76.87364310053896 30.41279703307221 2 9.822427053871523 7.7719090266312 3 3.6074009298259093 4.28148639263366 4 1.8430079145635905 2.9165276094779062 5 1.136470897113536 2.2480565076578976 6 0.8231366405652928 1.9538988842188731 7 0.6065566725752054 1.679764215619595 8 0.4733751833599929 1.4982158036342492 9 0.38400102100237543 1.36726843910176 >10 4.273521266799244 35.949510189860405 >50 0.12069718954792227 2.97157159288163 >100 0.029056730817092362 2.287813897837521 >500 0.0033526997096645036 0.9315728829343235 >1k 0.0033526997096645036 3.729607524438769 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4216 0.9212662603713472 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTC 3582 0.7827266946513676 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCG 3218 0.7031866285282247 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGC 2802 0.6122836958160613 No Hit GCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC 2009 0.43899998033350013 No Hit CCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC 1044 0.2281313984411021 No Hit CTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGCT 825 0.1802762487681123 Illumina Single End Adapter 1 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCT 814 0.17787256545120414 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCT 739 0.16148381556319394 No Hit TCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTCTTCTGC 686 0.14990243230900005 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCC 617 0.13482478241203066 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCTATCGTTCGTATGCCGTC 533 0.11646938253745921 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCTATCGTTCGTA 498 0.1088212992563878 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 489 0.10685464926982657 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.555499955204084E-4 0.0 0.0 0.18967246537057147 0.0 2 6.555499955204084E-4 0.0 0.0 1.1456828755045003 0.0 3 6.555499955204084E-4 0.0 0.0 1.5335499561874086 0.0 4 6.555499955204084E-4 0.0 0.0 2.156103935266623 0.0 5 6.555499955204084E-4 0.0 0.0 4.126468705135797 0.0 6 6.555499955204084E-4 0.0 0.0 5.248551780801563 0.0 7 6.555499955204084E-4 0.0 0.0 6.365827489833512 0.0 8 6.555499955204084E-4 0.0 0.0 7.891073812744329 0.0 9 8.740666606938778E-4 0.0 0.0 8.463805992163993 0.0 10 8.740666606938778E-4 0.0 0.0 10.437885545341116 0.0 11 8.740666606938778E-4 0.0 0.0 12.135978550404147 0.0 12 8.740666606938778E-4 0.0 0.0 14.176050136463658 0.0 13 0.0010925833258673473 0.0 0.0 14.787022732288678 0.0 14 0.0010925833258673473 0.0 0.0 15.04093909722025 0.0 15 0.0010925833258673473 0.0 0.0 15.508127727361128 0.0 16 0.0010925833258673473 0.0 0.0 16.315328288511925 0.0 17 0.0010925833258673473 0.0 0.0 17.270246115319985 0.0 18 0.0010925833258673473 0.0 0.0 18.289407841689048 0.0 19 0.0010925833258673473 0.0 0.0 19.014883170064966 0.0 20 0.0013110999910408167 0.0 0.0 19.64180748244765 0.0 21 0.0013110999910408167 0.0 0.0 20.402463993916495 0.0 22 0.0013110999910408167 0.0 0.0 21.203764605107608 0.0 23 0.0013110999910408167 0.0 0.0 22.017302149548435 0.0 24 0.0013110999910408167 0.0 0.0 22.637452445310743 0.0 25 0.0013110999910408167 0.0 0.0 23.17325530831609 0.0 26 0.0013110999910408167 0.0 0.0 23.67781028820163 0.0 27 0.0015296166562142862 0.0 0.0 24.243331417670568 0.0 28 0.0015296166562142862 0.0 0.0 24.795304513898753 0.0 29 0.0017481333213877556 0.0 0.0 25.33809991018965 0.0 30 0.0017481333213877556 0.0 0.0 25.97551302250066 0.0 31 0.0017481333213877556 0.0 0.0 26.5484637185855 0.0 32 0.0017481333213877556 0.0 0.0 27.087981364898795 0.0 33 0.0017481333213877556 0.0 0.0 27.647165511077702 0.0 34 0.0017481333213877556 0.0 0.0 28.14472795767769 0.0 35 0.0017481333213877556 0.0 0.0 28.66676427077711 0.0 36 0.0017481333213877556 0.0 0.0 29.156241600765682 0.0 37 0.0017481333213877556 0.0 0.0 29.663855813963654 0.0 38 0.0017481333213877556 0.0 0.0 30.152677593956703 0.0 39 0.0017481333213877556 0.0 0.0 30.632758707342816 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGCT 20 7.02883E-4 45.000004 34 CAACGTA 20 7.02883E-4 45.000004 26 CGTGAGA 20 7.02883E-4 45.000004 19 CTATACG 20 7.02883E-4 45.000004 11 GACGTAG 35 1.2097917E-7 45.000004 1 ATTACGG 40 6.7993824E-9 45.000004 2 TTCACGA 20 7.02883E-4 45.000004 45 GTAGCGA 20 7.02883E-4 45.000004 28 TACGATC 20 7.02883E-4 45.000004 14 AATAGCG 20 7.02883E-4 45.000004 1 TATACGA 20 7.02883E-4 45.000004 12 GGTTACG 20 7.02883E-4 45.000004 1 AACACGT 20 7.02883E-4 45.000004 41 ACGCGCT 20 7.02883E-4 45.000004 25 ACGCATT 25 3.8871134E-5 45.0 35 TTTCGTC 45 3.8380676E-10 45.0 16 CGATTCG 25 3.8871134E-5 45.0 10 TACGAAT 75 0.0 45.0 12 CGAATAT 75 0.0 45.0 14 GCGATAT 25 3.8871134E-5 45.0 9 >>END_MODULE