##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935983.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1271727 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07033349138612 33.0 31.0 34.0 30.0 34.0 2 32.22035861470268 33.0 31.0 34.0 30.0 34.0 3 32.095934897977315 33.0 31.0 34.0 30.0 34.0 4 35.779452665548504 37.0 35.0 37.0 35.0 37.0 5 32.10217365834019 37.0 35.0 37.0 0.0 37.0 6 33.86090961346264 37.0 35.0 37.0 17.0 37.0 7 35.485317210376124 37.0 35.0 37.0 32.0 37.0 8 35.70071485468186 37.0 35.0 37.0 35.0 37.0 9 37.66044441928181 39.0 37.0 39.0 35.0 39.0 10 37.32651425974285 39.0 37.0 39.0 34.0 39.0 11 37.2784544167105 39.0 37.0 39.0 34.0 39.0 12 37.20759329635999 39.0 37.0 39.0 34.0 39.0 13 37.13289880611169 39.0 37.0 39.0 33.0 39.0 14 38.302694682113376 40.0 38.0 41.0 33.0 41.0 15 38.41695190870367 40.0 38.0 41.0 34.0 41.0 16 38.43782824458394 40.0 38.0 41.0 34.0 41.0 17 38.39334228179476 40.0 38.0 41.0 34.0 41.0 18 38.22996602258189 40.0 37.0 41.0 34.0 41.0 19 38.02439438653107 40.0 37.0 41.0 34.0 41.0 20 37.87735024891349 40.0 35.0 41.0 33.0 41.0 21 37.86169594574936 40.0 35.0 41.0 33.0 41.0 22 37.910446188529455 40.0 35.0 41.0 34.0 41.0 23 37.88063475887514 40.0 35.0 41.0 34.0 41.0 24 37.84843916972746 40.0 35.0 41.0 33.0 41.0 25 37.64957494808241 40.0 35.0 41.0 33.0 41.0 26 37.63056615138312 40.0 35.0 41.0 33.0 41.0 27 37.59022573240955 40.0 35.0 41.0 33.0 41.0 28 37.493495852490355 40.0 35.0 41.0 33.0 41.0 29 37.45489951852874 40.0 35.0 41.0 33.0 41.0 30 37.25495802165087 40.0 35.0 41.0 33.0 41.0 31 37.12432463885724 40.0 35.0 41.0 32.0 41.0 32 36.86427197032067 40.0 35.0 41.0 31.0 41.0 33 36.62982621270131 40.0 35.0 41.0 31.0 41.0 34 36.3341173066232 39.0 35.0 41.0 30.0 41.0 35 36.178980237110636 39.0 35.0 41.0 29.0 41.0 36 36.0290840722891 39.0 35.0 41.0 28.0 41.0 37 35.952341186433884 39.0 35.0 41.0 28.0 41.0 38 35.79156139643178 39.0 35.0 41.0 27.0 41.0 39 35.6349680395242 39.0 35.0 41.0 26.0 41.0 40 35.56601220230443 39.0 35.0 41.0 25.0 41.0 41 35.48372960548923 39.0 35.0 41.0 25.0 41.0 42 35.423355798846764 39.0 35.0 41.0 25.0 41.0 43 35.358695694909365 39.0 35.0 41.0 24.0 41.0 44 35.334753449443156 39.0 35.0 41.0 24.0 41.0 45 35.33109149998388 39.0 35.0 41.0 24.0 41.0 46 35.201341168348236 38.0 35.0 41.0 24.0 41.0 47 35.08687084570824 38.0 35.0 41.0 23.0 41.0 48 35.05793932188276 38.0 35.0 40.0 23.0 41.0 49 35.049406043907226 38.0 35.0 40.0 24.0 41.0 50 34.92307704405112 38.0 35.0 40.0 24.0 41.0 51 33.97963871176754 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 29.0 9 37.0 10 53.0 11 47.0 12 34.0 13 31.0 14 46.0 15 60.0 16 115.0 17 203.0 18 437.0 19 954.0 20 1813.0 21 3347.0 22 5553.0 23 8234.0 24 11450.0 25 15627.0 26 19508.0 27 20779.0 28 20364.0 29 19665.0 30 21117.0 31 25056.0 32 32635.0 33 46345.0 34 77163.0 35 94878.0 36 97346.0 37 141230.0 38 224995.0 39 382266.0 40 305.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.6632233175831 17.648520476485913 20.607252971746295 18.081003234184696 2 35.88356620564005 25.369517199839276 22.55515531242161 16.19176128209907 3 29.059774621439978 26.026026026026027 29.95768745965132 14.95651189288267 4 25.95045949327175 23.184378408259004 33.74592188417797 17.119240214291274 5 23.933988977194005 34.23439150069158 25.766850904321448 16.06476861779297 6 23.5519101190743 34.19137912460772 28.728964628414744 13.527746127903237 7 73.26588174977806 5.3198524526097195 17.25087223908905 4.163393558523174 8 74.50262517033923 7.762436434863772 13.858634754157142 3.876303640639854 9 69.18127868638474 6.400744813941986 15.264675516050222 9.153300983623057 10 39.240733270584016 23.642181065590336 22.662568302788255 14.454517361037391 11 29.750567535327942 23.042917229877165 29.14422670903425 18.06228852576064 12 24.996245263330888 20.469330288654717 33.75189800955709 20.78252643845731 13 24.745169364179574 21.303235678726644 35.8708276225951 18.080767334498677 14 19.759665399885353 25.79924779453452 34.70705583824201 19.734030967338114 15 18.643230819193114 23.31687539857218 37.95358595044377 20.086307831790943 16 22.21404436644028 23.327962683815002 32.95369210530247 21.50430084444224 17 22.751895650560222 24.21533866938423 32.163506790372466 20.869258889683085 18 22.54414666040746 22.903185982526125 32.776688707560666 21.77597864950575 19 22.841773430932896 24.825375257425534 30.382935960312235 21.949915351329334 20 24.679746517924052 25.238435607642206 31.995703480385334 18.08611439404841 21 22.648728854541893 26.5746500624741 32.54975320961181 18.226867873372193 22 22.061024103443586 22.041208529818114 34.3401531932561 21.5576141734822 23 22.3238163536671 24.48355661238615 33.046007515763996 20.146619518182753 24 21.764262298433547 24.654505251520177 32.250081975140894 21.33115047490538 25 21.613601032297026 27.681570022496967 30.376723935247107 20.3281050099589 26 20.622979617480798 24.506596148387196 32.190320721349785 22.680103512782225 27 22.326804416356655 24.050444788857988 31.67708163780434 21.94566915698102 28 19.13177906893539 26.039315041671678 32.65520036926164 22.173705520131286 29 21.20950487014902 23.62566808756911 33.468110687278006 21.696716355003865 30 21.27799441232277 25.169552899325094 32.19692591255828 21.355526775793862 31 22.053239413805006 24.994908498443454 30.307369427557955 22.644482660193578 32 24.083313478443095 25.034461012465727 30.536192122994947 20.34603338609623 33 23.932337679391882 24.47357019234474 28.897003838087894 22.697088290175486 34 21.249607816771995 24.828520586572434 30.951061037471096 22.97081055918448 35 22.06023777115686 25.883778515357463 29.396088940472286 22.659894773013388 36 22.01109200323654 27.887667714847602 28.131902523104408 21.969337758811445 37 21.126310914213505 26.380740520567702 29.68789685207596 22.805051713142838 38 22.269873958797763 26.27718055840601 28.804137995025663 22.64880748777057 39 22.0747062852326 25.07503575846074 29.2553354611485 23.59492249515816 40 23.16283290360274 25.156499783365454 29.82707766682629 21.853589646205513 41 20.0727042832306 25.401285024222965 29.220500940846584 25.305509751699855 42 20.8892317297659 25.9039872551263 30.366265715833666 22.840515299274138 43 22.100576617465855 24.7090767122189 29.509399422989368 23.680947247325882 44 22.245576291137954 24.403114819454174 29.910507522447823 23.44080136696005 45 21.26234639981694 24.59977652436411 28.557858722823376 25.58001835299557 46 22.382869908400153 25.919399367946106 29.027928163827614 22.669802559826127 47 20.062796496417864 25.60879811468971 32.21398932318021 22.114416065712216 48 21.150765848330654 25.985844446174376 29.835019622922214 23.028370082572753 49 21.337991565799893 24.511392775336216 31.581542264967243 22.569073393896648 50 20.794635955672877 24.764906304576375 30.84687200948002 23.59358573027073 51 20.610791467036556 24.49244216722614 29.54258264548917 25.354183720248137 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 673.0 1 1311.5 2 1950.0 3 18003.0 4 34056.0 5 21711.0 6 9366.0 7 9039.5 8 8713.0 9 8500.5 10 8288.0 11 8132.5 12 7977.0 13 7783.5 14 7590.0 15 7114.5 16 6639.0 17 6305.0 18 5971.0 19 5910.0 20 5849.0 21 6284.5 22 6720.0 23 6909.0 24 7098.0 25 8162.5 26 10513.0 27 11799.0 28 13508.0 29 15217.0 30 18395.0 31 21573.0 32 23425.5 33 25278.0 34 29813.5 35 34349.0 36 36723.0 37 39097.0 38 40930.0 39 42763.0 40 46315.0 41 49867.0 42 55230.5 43 60594.0 44 67152.5 45 73711.0 46 95640.0 47 117569.0 48 106529.0 49 95489.0 50 95879.5 51 96270.0 52 88355.5 53 80441.0 54 75710.5 55 70980.0 56 67374.0 57 63768.0 58 61106.5 59 58445.0 60 54800.0 61 51155.0 62 46865.0 63 42575.0 64 37674.0 65 32773.0 66 27493.0 67 22213.0 68 19214.0 69 16215.0 70 13788.0 71 11361.0 72 9374.0 73 7387.0 74 6173.0 75 3958.5 76 2958.0 77 2244.5 78 1531.0 79 1143.0 80 755.0 81 561.5 82 368.0 83 220.0 84 72.0 85 51.5 86 31.0 87 28.0 88 25.0 89 20.0 90 15.0 91 9.5 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1271727.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.46397182046972 #Duplication Level Percentage of deduplicated Percentage of total 1 73.50541293796364 21.657614154561514 2 8.921982413525809 5.257540768297017 3 3.7200552168498353 3.2882280623956475 4 2.179283896398484 2.5684143724915356 5 1.400552742685627 2.0632923271785444 6 0.9909276404753913 1.7517998445054885 7 0.7349361155266473 1.515789589840583 8 0.5851350624607123 1.3792322393208973 9 0.4913170577053032 1.3028536748830635 >10 7.267613978328637 48.780056987001714 >50 0.16357993148681277 2.9289346866831467 >100 0.03217350197109167 1.7158060703034432 >500 0.0029740211862142292 0.6867525938655741 >1k 0.0029740211862142292 1.4520503747803832 >5k 5.407311247662235E-4 1.1260798824827463 >10k+ 5.407311247662235E-4 2.525554371408672 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20163 1.5854817897237379 No Hit GAATCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 11541 0.9075060921093914 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCG 7610 0.5983988701977704 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGC 6526 0.5131604503167739 No Hit GAACTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCT 3367 0.2647580809403276 No Hit GCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 2569 0.20200876445966784 TruSeq Adapter, Index 13 (95% over 21bp) CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2309 0.1815641250048163 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCT 1553 0.12211740412840176 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTT 1502 0.11810710946610398 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTC 1295 0.10183003113089523 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1288 0.1012795985301877 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.358996860175179E-4 0.0 0.0 0.060390319620484585 0.0 2 2.358996860175179E-4 0.0 0.0 0.3574666575452121 0.0 3 2.358996860175179E-4 0.0 0.0 0.519215208924557 0.0 4 2.358996860175179E-4 0.0 0.0 0.9367576531755636 0.0 5 2.358996860175179E-4 0.0 0.0 2.2676250484577274 0.0 6 2.358996860175179E-4 0.0 0.0 3.043577748998016 0.0 7 2.358996860175179E-4 0.0 0.0 3.6650161551968305 0.0 8 3.145329146900239E-4 0.0 0.0 4.4273653071767765 0.0 9 3.145329146900239E-4 0.0 0.0 4.83507859784372 0.0 10 3.145329146900239E-4 0.0 0.0 6.073080150063654 0.0 11 3.145329146900239E-4 0.0 0.0 6.730925741137838 0.0 12 3.145329146900239E-4 0.0 0.0 7.828960146320712 0.0 13 3.145329146900239E-4 0.0 0.0 8.117072296176774 0.0 14 3.145329146900239E-4 0.0 0.0 8.30083815158442 0.0 15 3.145329146900239E-4 0.0 0.0 8.547431956701399 0.0 16 3.145329146900239E-4 0.0 0.0 8.82044652665234 0.0 17 3.145329146900239E-4 0.0 0.0 9.116579265832998 0.0 18 3.145329146900239E-4 0.0 0.0 9.456982512756275 0.0 19 3.145329146900239E-4 0.0 0.0 9.784018110805228 0.0 20 3.145329146900239E-4 0.0 0.0 10.028095652604687 0.0 21 3.145329146900239E-4 0.0 0.0 10.296313595606604 0.0 22 3.145329146900239E-4 0.0 0.0 10.637031375444572 0.0 23 3.145329146900239E-4 0.0 0.0 10.916022070774623 0.0 24 3.145329146900239E-4 0.0 0.0 11.171501430731595 0.0 25 3.145329146900239E-4 0.0 0.0 11.403154922400798 0.0 26 3.145329146900239E-4 0.0 0.0 11.621676664881692 0.0 27 3.931661433625298E-4 0.0 0.0 11.886198846136002 0.0 28 3.931661433625298E-4 0.0 0.0 12.119189102692637 0.0 29 4.717993720350358E-4 0.0 0.0 12.385441214977742 0.0 30 4.717993720350358E-4 0.0 0.0 12.778056925739564 0.0 31 4.717993720350358E-4 0.0 0.0 13.065382743308902 0.0 32 4.717993720350358E-4 0.0 0.0 13.354045325765671 0.0 33 4.717993720350358E-4 0.0 0.0 13.623128234282987 0.0 34 4.717993720350358E-4 0.0 0.0 13.91218398288312 0.0 35 4.717993720350358E-4 0.0 0.0 14.228053662460574 0.0 36 5.504326007075418E-4 0.0 0.0 14.499810100752756 0.0 37 5.504326007075418E-4 0.0 0.0 14.771723805502281 0.0 38 5.504326007075418E-4 0.0 0.0 15.096400406691059 0.0 39 5.504326007075418E-4 0.0 0.0 15.624343903998264 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGTAA 90 0.0 45.000004 41 CGTTTTT 8460 0.0 43.164894 1 CGTTATT 1015 0.0 42.78325 1 TAATACG 395 0.0 42.151897 4 ACGTAAG 75 0.0 42.000004 1 CGATGAA 1675 0.0 41.10448 19 CCGATGA 1680 0.0 40.3125 18 TAGCCGT 45 1.9284926E-8 40.000004 44 TACGGGA 390 0.0 39.807693 4 CCGTAAG 85 0.0 39.705883 42 CTCGAAT 205 0.0 39.51219 43 GATGAAT 1865 0.0 38.967827 20 ACGGGTA 145 0.0 38.793106 5 CGTAAGG 175 0.0 38.571426 2 TACGGCT 830 0.0 37.68072 7 TATTGCG 90 0.0 37.500004 1 AAGGGCG 450 0.0 37.5 5 ATATGCG 60 1.5643309E-10 37.499996 1 TCGTCTA 30 1.1399903E-4 37.499996 19 ATGAATG 1920 0.0 37.499996 21 >>END_MODULE