##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935979.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1004853 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.16456834979843 33.0 31.0 34.0 30.0 34.0 2 32.3194974787357 34.0 31.0 34.0 30.0 34.0 3 32.153162701410054 33.0 31.0 34.0 30.0 34.0 4 35.83502064481073 37.0 35.0 37.0 35.0 37.0 5 32.343005394818945 37.0 35.0 37.0 0.0 37.0 6 34.0542278323297 37.0 35.0 37.0 19.0 37.0 7 35.64574818406275 37.0 35.0 37.0 32.0 37.0 8 35.88645304338048 37.0 35.0 37.0 35.0 37.0 9 37.870169069505685 39.0 38.0 39.0 35.0 39.0 10 37.493662257066454 39.0 37.0 39.0 35.0 39.0 11 37.430813263233524 39.0 37.0 39.0 35.0 39.0 12 37.452127823671724 39.0 37.0 39.0 35.0 39.0 13 37.454387855736115 39.0 37.0 39.0 35.0 39.0 14 38.79125802480562 40.0 38.0 41.0 35.0 41.0 15 38.895141876473474 40.0 38.0 41.0 35.0 41.0 16 38.81892177263739 40.0 38.0 41.0 35.0 41.0 17 38.79280153415475 40.0 38.0 41.0 35.0 41.0 18 38.56562601693979 40.0 38.0 41.0 35.0 41.0 19 38.29623437458016 40.0 37.0 41.0 34.0 41.0 20 38.20812994537509 40.0 36.0 41.0 34.0 41.0 21 38.1233653081595 40.0 36.0 41.0 34.0 41.0 22 38.16567696966621 40.0 36.0 41.0 34.0 41.0 23 38.1544962297968 40.0 36.0 41.0 34.0 41.0 24 38.1065369760552 40.0 35.0 41.0 34.0 41.0 25 37.857688637044426 40.0 35.0 41.0 34.0 41.0 26 37.88864241834378 40.0 35.0 41.0 34.0 41.0 27 37.87555692225629 40.0 35.0 41.0 34.0 41.0 28 37.788523296442364 40.0 35.0 41.0 34.0 41.0 29 37.72314258901551 40.0 35.0 41.0 33.0 41.0 30 37.49933472856229 40.0 35.0 41.0 33.0 41.0 31 37.35304765970744 40.0 35.0 41.0 33.0 41.0 32 37.04552705719145 40.0 35.0 41.0 32.0 41.0 33 36.683443249908194 40.0 35.0 41.0 31.0 41.0 34 36.33851319546242 40.0 35.0 41.0 29.0 41.0 35 36.14562627568411 40.0 35.0 41.0 27.0 41.0 36 35.9562771868124 40.0 35.0 41.0 25.0 41.0 37 35.88785324818655 40.0 35.0 41.0 25.0 41.0 38 35.73610965982089 40.0 35.0 41.0 24.0 41.0 39 35.6317361842976 39.0 35.0 41.0 23.0 41.0 40 35.555996747783006 39.0 35.0 41.0 23.0 41.0 41 35.42547417383438 39.0 35.0 41.0 23.0 41.0 42 35.389007148309254 39.0 35.0 41.0 23.0 41.0 43 35.304415670749854 39.0 35.0 41.0 22.0 41.0 44 35.24195081270594 39.0 35.0 41.0 22.0 41.0 45 35.203185938639784 39.0 35.0 41.0 22.0 41.0 46 35.08324899263872 39.0 35.0 41.0 22.0 41.0 47 34.986683624370926 39.0 35.0 41.0 22.0 41.0 48 34.93073713269503 39.0 35.0 41.0 22.0 41.0 49 34.86467672385911 39.0 35.0 41.0 20.0 41.0 50 34.75159650217495 38.0 35.0 41.0 20.0 41.0 51 33.851185198232976 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 17.0 9 28.0 10 38.0 11 32.0 12 20.0 13 23.0 14 28.0 15 49.0 16 86.0 17 166.0 18 303.0 19 680.0 20 1163.0 21 2003.0 22 3270.0 23 5183.0 24 8701.0 25 13688.0 26 19420.0 27 20518.0 28 18695.0 29 16648.0 30 15876.0 31 17739.0 32 21194.0 33 29473.0 34 48665.0 35 66821.0 36 69145.0 37 106118.0 38 183521.0 39 335273.0 40 265.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.50817283722097 19.061295532779422 21.900815343139744 21.529716286859866 2 38.276942000471706 23.3353535293222 22.87677899155399 15.510925478652101 3 29.491477857955346 22.462887606445918 32.72359240605342 15.322042129545316 4 25.557270565943472 23.48044937916292 33.78414554168619 17.178134513207404 5 21.445823418947846 34.321836129264675 28.49352094286428 15.738819508923196 6 23.552400201820564 31.977811679917362 30.679114258503482 13.790673859758593 7 74.27036591421829 5.133288152595454 16.666815942232347 3.9295299909539008 8 76.68146485107772 5.075468750155496 15.041503583111163 3.201562815655623 9 70.96928605477618 7.026301359502335 16.531671796770272 5.47274078895122 10 34.774439644405696 29.204371186631278 23.513688071787612 12.507501097175409 11 25.641362467943075 24.229713201831512 33.34049856048596 16.788425769739455 12 23.43775656737851 22.01108022765519 35.85589135923364 18.69527184573266 13 21.751937845635133 22.593653001981384 37.4364210486509 18.217988103732587 14 19.01233314723646 26.11347132366625 35.75030377577616 19.123891753321132 15 18.191317535997804 24.890406855530113 38.49587949680202 18.422396111670064 16 21.130254873100842 24.662711859346594 36.38134135042638 17.82569191712619 17 21.139310924085414 24.099345874471194 34.8017073144032 19.959635887040193 18 21.696407335202263 23.978333149226803 35.09986037758757 19.225399137983366 19 21.91345400770063 25.552294713754154 33.59794915276165 18.936302125783573 20 23.6177828995883 24.773374812037183 34.12648417231177 17.482358116062745 21 22.650875302158624 25.452578635880073 34.29735493649319 17.599191125468103 22 21.846777588363672 23.14089722576337 34.58466064190483 20.42766454396812 23 20.661231045735047 25.74665150026919 34.389408201995714 19.202709252000044 24 19.972971170907584 24.820645407835773 35.585105483090565 19.621277938166077 25 20.467172810351364 26.462378079181732 33.88386161956027 19.186587490906632 26 20.111399378814614 26.266727571097466 34.133848433551975 19.488024616535952 27 21.351182710306883 25.462132272083576 33.76832233172414 19.4183626858854 28 19.55261117795339 26.493128845711762 34.92879057931857 19.02546939701628 29 19.95316727919407 24.510948367572173 35.4204047756239 20.11547957760986 30 20.394624885431003 24.446859391373664 34.71662024196574 20.441895481229594 31 21.569423587330686 24.89359140093128 32.634226100733144 20.90275891100489 32 21.87832449124399 25.538262810580253 32.76618570079405 19.817226997381706 33 20.895295132720907 25.687836927391373 32.35816582126938 21.058702118618346 34 20.71497024937976 26.84193608418346 32.544760278369075 19.89833338806771 35 21.094130186206343 26.055850955313865 31.686425775710475 21.16359308276932 36 21.152845242040378 27.852531663835407 30.934474992859652 20.060148101264563 37 21.449007964349015 27.375148404791545 30.766191671816674 20.409651959042765 38 21.04924799945863 27.104860113867403 30.816845847104002 21.02904603956997 39 21.529716286859866 26.529751117825196 30.997270247488935 20.943262347826 40 21.985902415577204 26.16770811252989 32.18530471621222 19.661084755680683 41 20.335909829596964 26.973497616069213 31.926858953498673 20.763733600835145 42 21.82995920796375 26.744707932404044 31.104947688865934 20.320385170766272 43 21.712728130383248 26.575230406835626 30.992393912343395 20.719647550437724 44 21.82747128186909 26.499796487645455 30.198347419970883 21.474384810514575 45 21.085173652265553 26.060329222284256 30.26790983357765 22.586587291872544 46 21.33356819355667 26.86502403834193 29.93174125966684 21.86966650843457 47 20.918283569835587 26.946528497203076 31.507693165069917 20.62749476789142 48 21.393477453916145 25.71460701216994 31.229642544730424 21.662272989183492 49 21.1084606405116 25.802779112964778 31.803159268072044 21.285600978451573 50 20.016858187217434 26.04261518849026 31.63796097538645 22.30256564890586 51 20.268238239822143 25.517165197297516 30.72668340543343 23.48791315744691 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 598.0 1 1127.5 2 1657.0 3 15903.5 4 30150.0 5 20217.5 6 10285.0 7 10053.5 8 9822.0 9 9679.0 10 9536.0 11 9357.0 12 9178.0 13 8856.5 14 8535.0 15 8137.5 16 7740.0 17 7607.5 18 7475.0 19 7312.0 20 7149.0 21 6941.5 22 6734.0 23 7072.0 24 7410.0 25 8410.5 26 10621.5 27 11832.0 28 13494.5 29 15157.0 30 16689.0 31 18221.0 32 20986.5 33 23752.0 34 26681.0 35 29610.0 36 32619.5 37 35629.0 38 38508.0 39 41387.0 40 44633.0 41 47879.0 42 51505.5 43 55132.0 44 58848.0 45 62564.0 46 70197.0 47 77830.0 48 77010.0 49 76190.0 50 74530.0 51 72870.0 52 67117.5 53 61365.0 54 56609.5 55 51854.0 56 48513.5 57 45173.0 58 41313.0 59 37453.0 60 35276.0 61 33099.0 62 30016.0 63 26933.0 64 22794.5 65 18656.0 66 15361.5 67 12067.0 68 10013.0 69 7959.0 70 6924.0 71 5889.0 72 5251.0 73 4613.0 74 3647.0 75 2222.0 76 1763.0 77 1375.5 78 988.0 79 681.0 80 374.0 81 255.5 82 137.0 83 93.5 84 50.0 85 33.5 86 17.0 87 27.0 88 37.0 89 21.0 90 5.0 91 4.0 92 3.0 93 3.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1004853.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.828931812630074 #Duplication Level Percentage of deduplicated Percentage of total 1 74.59728520183616 25.23546474500234 2 8.62343394806013 5.834431180392909 3 3.7210700480143064 3.7763947477288826 4 2.128846338535313 2.880663905035132 5 1.3593853515208967 2.2993277181844287 6 1.0162948573384987 2.062810165825841 7 0.7743910616306674 1.8337775694149843 8 0.6514636228654886 1.7630654781060455 9 0.5327097146592517 1.6218900551820101 >10 6.438713528484106 45.237913547199746 >50 0.12417915249632626 2.5888197158838997 >100 0.02779224228019727 1.6790247909565146 >500 0.002365297215263293 0.5857133005099788 >1k 0.0017739729114474698 0.9606858352797722 >5k 0.0 0.0 >10k+ 2.956621519079116E-4 1.6400172452974937 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16397 1.6317809669673076 No Hit GAATCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTC 2391 0.23794525169353128 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCG 1821 0.18122053673522398 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1796 0.17873261064056137 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGC 1414 0.1407170999141168 No Hit CGCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTTCTG 1096 0.10907067999000848 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTT 1087 0.10817502659592995 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.985511313595123E-4 0.0 0.0 0.054336305907431236 0.0 2 2.985511313595123E-4 0.0 0.0 0.25894334793248364 0.0 3 2.985511313595123E-4 0.0 0.0 0.4567832309800538 0.0 4 2.985511313595123E-4 0.0 0.0 0.6821893351564856 0.0 5 2.985511313595123E-4 0.0 0.0 1.3812965677566769 0.0 6 2.985511313595123E-4 0.0 0.0 2.050648204264703 0.0 7 2.985511313595123E-4 0.0 0.0 2.5619667752397612 0.0 8 2.985511313595123E-4 0.0 0.0 3.2020604008745557 0.0 9 2.985511313595123E-4 0.0 0.0 3.5541517017912074 0.0 10 2.985511313595123E-4 0.0 0.0 4.320831007122435 0.0 11 2.985511313595123E-4 0.0 0.0 5.0083942626433915 0.0 12 2.985511313595123E-4 0.0 0.0 5.722429051811559 0.0 13 2.985511313595123E-4 0.0 0.0 6.031628506856227 0.0 14 2.985511313595123E-4 0.0 0.0 6.184188134980937 0.0 15 2.985511313595123E-4 0.0 0.0 6.376654097664036 0.0 16 2.985511313595123E-4 0.0 0.0 6.669532757527718 0.0 17 3.980681751460164E-4 0.0 0.0 7.0261023254147625 0.0 18 3.980681751460164E-4 0.0 0.0 7.421782091509902 0.0 19 3.980681751460164E-4 0.0 0.0 7.702121603856485 9.95170437865041E-5 20 3.980681751460164E-4 0.0 0.0 7.9552929632493505 9.95170437865041E-5 21 3.980681751460164E-4 0.0 0.0 8.250958100339055 9.95170437865041E-5 22 3.980681751460164E-4 0.0 0.0 8.58274792432326 9.95170437865041E-5 23 4.975852189325205E-4 0.0 0.0 8.919911668671935 9.95170437865041E-5 24 4.975852189325205E-4 0.0 0.0 9.185522658538115 9.95170437865041E-5 25 4.975852189325205E-4 0.0 0.0 9.437798364536903 9.95170437865041E-5 26 4.975852189325205E-4 0.0 0.0 9.67385279239849 9.95170437865041E-5 27 4.975852189325205E-4 0.0 0.0 9.923242504127469 9.95170437865041E-5 28 4.975852189325205E-4 0.0 0.0 10.194426448445693 9.95170437865041E-5 29 4.975852189325205E-4 0.0 0.0 10.470586244953243 9.95170437865041E-5 30 4.975852189325205E-4 0.0 0.0 10.801380898499582 9.95170437865041E-5 31 4.975852189325205E-4 0.0 0.0 11.103116575260263 9.95170437865041E-5 32 4.975852189325205E-4 0.0 0.0 11.401170121400842 9.95170437865041E-5 33 5.971022627190246E-4 0.0 0.0 11.68131059965985 9.95170437865041E-5 34 5.971022627190246E-4 0.0 0.0 11.952096475802929 9.95170437865041E-5 35 5.971022627190246E-4 0.0 0.0 12.24497513566661 9.95170437865041E-5 36 5.971022627190246E-4 0.0 0.0 12.524020926443967 9.95170437865041E-5 37 5.971022627190246E-4 0.0 0.0 12.812520836381044 9.95170437865041E-5 38 5.971022627190246E-4 0.0 0.0 13.09614441117258 9.95170437865041E-5 39 5.971022627190246E-4 0.0 0.0 13.405244349173461 9.95170437865041E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATTCG 20 7.0328615E-4 45.000004 10 CCGCGAA 20 7.0328615E-4 45.000004 33 ACGACTA 20 7.0328615E-4 45.000004 19 CGTTTTT 9325 0.0 43.455765 1 CGTTATT 1240 0.0 43.004032 1 TATTGCG 55 6.002665E-11 40.909092 1 TAATACG 100 0.0 40.500004 4 TCAAGCG 240 0.0 40.312504 17 TAGTACG 45 1.9279469E-8 40.000004 1 CCCGATG 45 1.9279469E-8 40.000004 15 CGAATGC 80 0.0 39.375004 45 CGTAAGG 160 0.0 39.375004 2 TACTACG 40 3.4576442E-7 39.375004 1 ACGTAAG 40 3.4576442E-7 39.375004 1 TACGGGA 375 0.0 39.0 4 CGCTCGA 35 6.2475046E-6 38.57143 41 ACTACGG 70 0.0 38.57143 2 GCGAGAC 260 0.0 38.07692 21 CACGTGA 220 0.0 37.84091 43 CGAACGG 60 1.546141E-10 37.500004 2 >>END_MODULE