##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935974.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 737671 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.00424986206588 33.0 31.0 34.0 30.0 34.0 2 32.14152650707429 33.0 31.0 34.0 30.0 34.0 3 32.01422043160162 33.0 31.0 34.0 30.0 34.0 4 35.711132740747566 37.0 35.0 37.0 33.0 37.0 5 32.000115227520126 37.0 35.0 37.0 0.0 37.0 6 33.786662346764345 37.0 35.0 37.0 17.0 37.0 7 35.40814672123481 37.0 35.0 37.0 32.0 37.0 8 35.614988253571035 37.0 35.0 37.0 33.0 37.0 9 37.582386999082246 39.0 37.0 39.0 35.0 39.0 10 37.20381037074794 39.0 37.0 39.0 34.0 39.0 11 37.19858581942356 39.0 37.0 39.0 34.0 39.0 12 37.20415876454408 39.0 37.0 39.0 34.0 39.0 13 37.140820230156805 39.0 37.0 39.0 33.0 39.0 14 38.449179918961164 40.0 38.0 41.0 34.0 41.0 15 38.51940905905207 40.0 38.0 41.0 34.0 41.0 16 38.52180443585284 40.0 38.0 41.0 34.0 41.0 17 38.4214710894152 40.0 38.0 41.0 34.0 41.0 18 38.22794443593418 40.0 38.0 41.0 34.0 41.0 19 37.99909444725358 40.0 37.0 41.0 34.0 41.0 20 37.76661411388004 40.0 35.0 41.0 33.0 41.0 21 37.820830695526865 40.0 35.0 41.0 33.0 41.0 22 37.837361100002575 40.0 35.0 41.0 33.0 41.0 23 37.780025241604996 40.0 35.0 41.0 33.0 41.0 24 37.78370981101331 40.0 35.0 41.0 33.0 41.0 25 37.61189066670643 40.0 35.0 41.0 33.0 41.0 26 37.57160712566984 40.0 35.0 41.0 33.0 41.0 27 37.49764325830892 40.0 35.0 41.0 33.0 41.0 28 37.410741373864504 40.0 35.0 41.0 33.0 41.0 29 37.36211536037068 40.0 35.0 41.0 33.0 41.0 30 37.15452823819833 40.0 35.0 41.0 32.0 41.0 31 37.00488293561764 40.0 35.0 41.0 32.0 41.0 32 36.70128282120349 40.0 35.0 41.0 31.0 41.0 33 36.382962052188574 40.0 35.0 41.0 30.0 41.0 34 36.00675504391524 40.0 35.0 41.0 27.0 41.0 35 35.78534875303489 40.0 35.0 41.0 25.0 41.0 36 35.631227200201714 40.0 35.0 41.0 24.0 41.0 37 35.48893476902305 39.0 35.0 41.0 23.0 41.0 38 35.38942834949456 39.0 35.0 41.0 23.0 41.0 39 35.259756720814565 39.0 35.0 41.0 22.0 41.0 40 35.20498975830689 39.0 35.0 41.0 22.0 41.0 41 35.07286175002135 39.0 35.0 41.0 21.0 41.0 42 35.04295546388566 39.0 35.0 41.0 21.0 41.0 43 34.977088702145 39.0 35.0 41.0 20.0 41.0 44 35.001760947631126 39.0 35.0 41.0 20.0 41.0 45 35.00697600963031 39.0 35.0 41.0 20.0 41.0 46 34.87060898422197 39.0 35.0 41.0 20.0 41.0 47 34.71584080165819 38.0 35.0 41.0 20.0 41.0 48 34.71328952880078 38.0 35.0 41.0 20.0 41.0 49 34.70314001770437 38.0 35.0 41.0 20.0 41.0 50 34.53866425547432 38.0 34.0 41.0 19.0 41.0 51 33.70826560892322 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 10.0 9 33.0 10 13.0 11 25.0 12 17.0 13 17.0 14 21.0 15 42.0 16 68.0 17 135.0 18 323.0 19 705.0 20 1504.0 21 2839.0 22 4227.0 23 5865.0 24 8136.0 25 11343.0 26 13961.0 27 14673.0 28 13019.0 29 12202.0 30 12404.0 31 14969.0 32 18112.0 33 24955.0 34 38545.0 35 51387.0 36 52644.0 37 77647.0 38 128037.0 39 229573.0 40 219.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.48361261321104 16.813593051644972 20.585328689890208 19.117465645253777 2 35.990841445576685 27.062742062518385 21.735163778974638 15.211252712930289 3 27.88844891557347 27.08904104946514 30.240174820482302 14.782335214479083 4 23.59547820098662 22.734389721162955 36.687764599665705 16.98236747818472 5 23.93275593048934 33.82985097692603 26.51751254963256 15.719880542952074 6 22.237420204942314 34.96626544896031 29.82535574802317 12.970958598074208 7 70.78657016474824 5.130878128596623 20.148955293077808 3.9335964135773263 8 71.53826028134493 9.087926731564613 15.304519223339403 4.069293763751049 9 66.3039485082103 6.606603756959403 16.734153843651168 10.35529389117913 10 36.53674876740444 23.672612858577878 25.13342669021827 14.657211683799417 11 27.874350489581403 24.143825635005307 30.673023610796683 17.30880026461661 12 22.9087221810265 20.798296259443575 35.12405937064084 21.168922188889088 13 23.398235798885953 22.485091592322323 37.14311664685205 16.973555961939674 14 18.564644672218375 28.142627268795984 34.23463847704464 19.058089581941 15 17.545897832502565 24.313955679428904 38.8410280463784 19.29911844169013 16 20.23557927585604 23.649025107398828 34.354475097977286 21.76092051876785 17 20.45125808117711 25.37120206704615 33.68479986335372 20.492739988423022 18 20.955412372182177 23.93424711016158 33.87716204107251 21.233178476583735 19 21.162279661258204 25.60314828697346 31.88047245994488 21.354099591823456 20 23.6797976333623 24.79723345502263 33.68642660481434 17.83654230680073 21 21.56069575732271 28.011674581215747 32.70943279592122 17.718196865540328 22 20.281534722118668 22.99304161340218 34.881132645854315 21.844291018624833 23 20.878142152802535 26.110556060899775 33.41923431990684 19.592067466390844 24 20.423739038134887 25.38597830198015 33.45136246375417 20.738920196130795 25 18.66414702489321 29.728429069327657 31.48869889151126 20.118725014267877 26 19.37205068384144 24.802927050134816 34.42998301410792 21.395039251915826 27 21.82287225605995 25.532791718801473 32.15010485704332 20.49423116809526 28 18.44385911876704 26.637755855930358 34.28154285582597 20.636842169476637 29 20.108557880138978 23.525257194603014 34.228402634778924 22.137782290479088 30 19.940596824329546 27.116153407142207 33.747971656741285 19.195278111786962 31 20.649178292219702 26.419636938418346 30.399053236469918 22.532131532892034 32 24.29497702905496 26.583937825941373 30.07126483215417 19.049820312849494 33 23.585988875799647 25.44874341000256 30.28287678382368 20.68239093037411 34 20.822968504929705 27.654198145243612 29.39508263168811 22.127750718138575 35 22.276868685362444 27.35704670510295 30.030596295638574 20.335488313896033 36 20.269740846529142 29.558163463115672 29.92784046004249 20.2442552303127 37 20.210771468581523 28.13801816799088 31.852817855114274 19.798392508313327 38 21.543343848409386 27.985646717845757 28.81623379528272 21.65477563846213 39 22.959557851671004 27.679819323248438 29.330961905781844 20.02966091929871 40 22.01740342239291 27.012448639027426 30.195168306738367 20.774979631841294 41 19.283664397814203 27.75952965481902 30.622052378363797 22.33475356900298 42 20.337115055356655 27.39866417413725 31.14410082543573 21.120119945070364 43 21.398292734837074 26.000073203365726 30.249664145669275 22.351969916127924 44 20.703131883997067 26.02352539275639 30.47022317537222 22.803119547874324 45 20.777690867609003 26.043181852072266 29.1261280435316 24.05299923678713 46 23.272027773899204 26.888274040866456 28.989210637262413 20.850487547971927 47 19.373677425302066 27.085109757601966 32.56939746851916 20.971815348576804 48 20.10679557688997 26.682897931462673 30.63425293931848 22.576053552328883 49 20.469152237243975 24.504555553898687 33.01946260595848 22.006829602898854 50 20.45478268767513 25.576849300026705 31.671300620466305 22.29706739183186 51 19.748370208399137 24.819465588317826 30.199099598601542 25.233064604681495 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 400.0 1 730.0 2 1060.0 3 10288.5 4 19517.0 5 12975.5 6 6434.0 7 6298.0 8 6162.0 9 6090.0 10 6018.0 11 5928.5 12 5839.0 13 5720.5 14 5602.0 15 5298.0 16 4994.0 17 4885.0 18 4776.0 19 4698.0 20 4620.0 21 4507.5 22 4395.0 23 4672.5 24 4950.0 25 5236.5 26 6204.5 27 6886.0 28 8484.0 29 10082.0 30 11425.0 31 12768.0 32 14447.0 33 16126.0 34 18423.0 35 20720.0 36 22730.5 37 24741.0 38 26001.0 39 27261.0 40 30792.5 41 34324.0 42 38411.0 43 42498.0 44 61617.5 45 80737.0 46 69735.0 47 58733.0 48 58624.5 49 58516.0 50 53901.0 51 49286.0 52 45957.5 53 42629.0 54 39559.0 55 36489.0 56 34047.0 57 31605.0 58 28912.0 59 26219.0 60 24680.5 61 23142.0 62 20510.5 63 17879.0 64 15128.0 65 12377.0 66 10031.5 67 7686.0 68 6702.0 69 5718.0 70 4749.0 71 3780.0 72 3369.5 73 2959.0 74 2405.0 75 1493.5 76 1136.0 77 878.0 78 620.0 79 481.0 80 342.0 81 268.5 82 195.0 83 120.5 84 46.0 85 30.0 86 14.0 87 11.0 88 8.0 89 5.5 90 3.0 91 1.5 92 0.0 93 2.0 94 4.0 95 2.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 737671.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.890688887371994 #Duplication Level Percentage of deduplicated Percentage of total 1 76.06643041552432 27.300765888165134 2 8.460269565399708 6.072898057501255 3 3.508939547841016 3.77814772908473 4 1.9365545604085637 2.7801710896418075 5 1.2852919014510236 2.3065005882218736 6 0.9821204494625844 2.1149387700952538 7 0.7507032711225274 1.8860280285413769 8 0.6389250387298626 1.8345167829924478 9 0.5190007369043733 1.6764564582496497 >10 5.747366930187787 40.501411837842696 >50 0.07550526320548687 1.7006230431278493 >100 0.022343393949886645 1.4507835295342746 >500 0.0026966165111932156 0.7061042109341028 >1k 0.0023113855810227564 1.492123877893252 >5k 0.0011556927905113782 2.8840077806685827 >10k+ 3.8523093017045934E-4 1.5145223275058082 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10954 1.4849438299729825 No Hit GAATCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTC 9352 1.2677738449796725 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCG 6127 0.8305870774369604 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGC 5380 0.7293224215131136 No Hit GAACTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCT 2671 0.3620855367772354 No Hit GCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTGC 2179 0.29538913689164953 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTT 1932 0.26190537516047124 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCT 1575 0.21350981670690594 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1220 0.16538538183011126 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTC 1215 0.16470757288818458 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTAGGAATT 914 0.1239034745841981 No Hit GAATATGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTC 824 0.11170291362951777 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTAGGAATTCGTA 797 0.10804274534311367 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.422471535413484E-4 0.0 0.0 0.08215044376151429 0.0 2 5.422471535413484E-4 0.0 0.0 0.5113390657894915 0.0 3 5.422471535413484E-4 0.0 0.0 0.697329839454174 0.0 4 5.422471535413484E-4 0.0 0.0 1.247439576721872 0.0 5 5.422471535413484E-4 0.0 0.0 3.0092005785777127 0.0 6 5.422471535413484E-4 0.0 0.0 3.8964524835597443 0.0 7 5.422471535413484E-4 0.0 0.0 4.574939234428356 0.0 8 5.422471535413484E-4 0.0 0.0 5.4799497336888665 0.0 9 5.422471535413484E-4 0.0 0.0 5.856947067188489 0.0 10 5.422471535413484E-4 0.0 0.0 7.4394953847989145 0.0 11 5.422471535413484E-4 0.0 0.0 8.221280218417153 0.0 12 5.422471535413484E-4 0.0 0.0 9.687380959804575 0.0 13 5.422471535413484E-4 0.0 0.0 10.060582563229406 0.0 14 5.422471535413484E-4 0.0 0.0 10.261214010039707 0.0 15 5.422471535413484E-4 0.0 0.0 10.576395168035615 0.0 16 5.422471535413484E-4 0.0 0.0 10.961797332415129 0.0 17 5.422471535413484E-4 0.0 0.0 11.395595055248206 0.0 18 6.778089419266854E-4 0.0 0.0 11.869112382078189 0.0 19 6.778089419266854E-4 0.0 0.0 12.322295440650372 0.0 20 6.778089419266854E-4 0.0 0.0 12.638154407588207 0.0 21 8.133707303120226E-4 0.0 0.0 12.981803541145036 0.0 22 8.133707303120226E-4 0.0 0.0 13.410449916019472 0.0 23 8.133707303120226E-4 0.0 0.0 13.806968147046582 0.0 24 8.133707303120226E-4 0.0 0.0 14.124860540810198 0.0 25 8.133707303120226E-4 0.0 0.0 14.407506869593627 0.0 26 8.133707303120226E-4 0.0 0.0 14.706962860136835 0.0 27 8.133707303120226E-4 0.0 0.0 15.007503344987128 0.0 28 8.133707303120226E-4 0.0 0.0 15.302621358302007 0.0 29 8.133707303120226E-4 0.0 0.0 15.602484034210374 0.0 30 8.133707303120226E-4 0.0 0.0 15.980294738440307 0.0 31 8.133707303120226E-4 0.0 0.0 16.30604971593027 0.0 32 8.133707303120226E-4 0.0 0.0 16.62272205359842 0.0 33 8.133707303120226E-4 0.0 0.0 16.941292256303964 0.0 34 9.489325186973597E-4 0.0 0.0 17.246984089112896 0.0 35 9.489325186973597E-4 0.0 0.0 17.56460535929974 0.0 36 9.489325186973597E-4 0.0 0.0 17.871788371780916 0.0 37 9.489325186973597E-4 0.0 0.0 18.18615615904651 0.0 38 9.489325186973597E-4 0.0 0.0 18.496999339814092 0.0 39 9.489325186973597E-4 0.0 0.0 18.830888024607177 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATTG 25 3.8894417E-5 45.000004 1 TTACGCG 25 3.8894417E-5 45.000004 1 CGACGGT 20 7.031642E-4 45.0 28 TTGCTCG 20 7.031642E-4 45.0 1 CCAATCG 40 6.8084773E-9 45.0 40 AATAGCG 20 7.031642E-4 45.0 1 GTACGTC 20 7.031642E-4 45.0 43 CGTTATT 750 0.0 43.5 1 CGTTTTT 5730 0.0 42.997383 1 CGGCGAA 190 0.0 42.63158 31 CGATGAA 1355 0.0 42.509228 19 CACAACG 75 0.0 42.0 12 TAATACG 270 0.0 41.666668 4 CCGATGA 1375 0.0 41.072727 18 CGACAGG 110 0.0 40.909092 2 CGATGCG 55 6.002665E-11 40.909092 10 CGAACCC 50 1.0804797E-9 40.500004 34 TATTGCG 50 1.0804797E-9 40.500004 1 CAATCGA 45 1.9266736E-8 40.0 41 GATGAAT 1525 0.0 39.540985 20 >>END_MODULE