SRR2935972.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935972.fastq
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	403979
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3844	0.9515346094722746	No Hit
GCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC	753	0.1863958275058852	No Hit
TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC	664	0.16436497936773942	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	578	0.1430767440881828	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	467	0.115600068320383	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	423	0.10470841306107496	No Hit
CCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC	419	0.10371826258295605	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGTACGG	65	0.0	45.000004	2
TCCGGAT	20	7.027849E-4	45.0	14
TAGCGAG	20	7.027849E-4	45.0	1
GCACGTC	20	7.027849E-4	45.0	38
CAACCGG	20	7.027849E-4	45.0	2
TTCGTTC	20	7.027849E-4	45.0	30
TAACGAC	20	7.027849E-4	45.0	21
GCGTTCG	25	3.886298E-5	45.0	10
TAGCCGT	20	7.027849E-4	45.0	44
ATCCGTC	20	7.027849E-4	45.0	28
TTATACG	25	3.886298E-5	45.0	1
TAACCGA	20	7.027849E-4	45.0	37
TCTACGG	20	7.027849E-4	45.0	2
AACGATC	20	7.027849E-4	45.0	33
GAACGAT	20	7.027849E-4	45.0	32
TCCGTCA	25	3.886298E-5	45.0	29
ATAACGG	45	3.8380676E-10	45.0	2
ATAACCG	20	7.027849E-4	45.0	36
CACGTCA	20	7.027849E-4	45.0	39
ATACGAG	20	7.027849E-4	45.0	1