##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935972.fastq File type Conventional base calls Encoding Illumina 1.5 Total Sequences 403979 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.18384123927234 33.0 31.0 34.0 30.0 34.0 2 32.30813482879061 34.0 31.0 34.0 30.0 34.0 3 32.21999410860465 34.0 31.0 34.0 30.0 34.0 4 35.85114820324819 37.0 35.0 37.0 35.0 37.0 5 32.103955898697706 37.0 35.0 37.0 0.0 37.0 6 33.928466578708296 37.0 35.0 37.0 17.0 37.0 7 35.59666962886685 37.0 35.0 37.0 32.0 37.0 8 35.834290891358215 37.0 35.0 37.0 35.0 37.0 9 37.80577950834078 39.0 38.0 39.0 35.0 39.0 10 37.46312060775436 39.0 37.0 39.0 35.0 39.0 11 37.39482250314992 39.0 37.0 39.0 35.0 39.0 12 37.268135224850795 39.0 37.0 39.0 35.0 39.0 13 37.171632683877135 39.0 37.0 39.0 34.0 39.0 14 38.41371952502482 40.0 38.0 41.0 34.0 41.0 15 38.57103463298835 40.0 38.0 41.0 35.0 41.0 16 38.51440297639234 40.0 38.0 41.0 34.0 41.0 17 38.51748481975548 40.0 38.0 41.0 34.0 41.0 18 38.41499434376539 40.0 37.0 41.0 34.0 41.0 19 38.233170536092224 40.0 37.0 41.0 34.0 41.0 20 38.23033375497241 40.0 36.0 41.0 34.0 41.0 21 38.130927597721666 40.0 36.0 41.0 34.0 41.0 22 38.19096289658621 40.0 36.0 41.0 34.0 41.0 23 38.2017604875501 40.0 36.0 41.0 34.0 41.0 24 38.14526002589243 40.0 36.0 41.0 34.0 41.0 25 37.891132954930825 40.0 35.0 41.0 34.0 41.0 26 37.944828815359216 40.0 35.0 41.0 34.0 41.0 27 37.94405402261009 40.0 35.0 41.0 34.0 41.0 28 37.85916594674476 40.0 35.0 41.0 34.0 41.0 29 37.83288735305548 40.0 35.0 41.0 34.0 41.0 30 37.64737275947512 40.0 35.0 41.0 33.0 41.0 31 37.57306939222088 40.0 35.0 41.0 33.0 41.0 32 37.41652412625409 40.0 35.0 41.0 33.0 41.0 33 37.26700892868194 40.0 35.0 41.0 33.0 41.0 34 37.09989380636122 40.0 35.0 41.0 33.0 41.0 35 37.00718354171875 40.0 35.0 41.0 32.0 41.0 36 36.86311169640006 40.0 35.0 41.0 32.0 41.0 37 36.78367687429297 40.0 35.0 41.0 31.0 41.0 38 36.65139029504009 39.0 35.0 41.0 31.0 41.0 39 36.57185893326138 39.0 35.0 41.0 31.0 41.0 40 36.499780929206715 39.0 35.0 41.0 31.0 41.0 41 36.40681570081613 39.0 35.0 41.0 31.0 41.0 42 36.38199015295349 39.0 35.0 41.0 31.0 41.0 43 36.27957146287307 39.0 35.0 41.0 30.0 41.0 44 36.18867812435795 39.0 35.0 41.0 30.0 41.0 45 36.17230103544986 39.0 35.0 41.0 30.0 41.0 46 36.05066352458915 39.0 35.0 41.0 30.0 41.0 47 35.995965136801665 39.0 35.0 41.0 30.0 41.0 48 35.94429908485342 38.0 35.0 41.0 30.0 41.0 49 35.88437517791766 38.0 35.0 41.0 30.0 41.0 50 35.77212924434191 38.0 35.0 41.0 29.0 41.0 51 34.81209914376738 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 10.0 9 12.0 10 13.0 11 17.0 12 13.0 13 12.0 14 19.0 15 25.0 16 32.0 17 60.0 18 108.0 19 197.0 20 335.0 21 523.0 22 818.0 23 1237.0 24 1936.0 25 2970.0 26 4383.0 27 5015.0 28 5139.0 29 5169.0 30 5827.0 31 7051.0 32 8928.0 33 14082.0 34 25308.0 35 35949.0 36 28918.0 37 44710.0 38 74144.0 39 130903.0 40 111.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.50908834370103 18.674733092561745 23.81014854732548 16.006030016411742 2 34.83695934689675 24.063874607343454 24.397802856089054 16.70136318967075 3 31.611296626804858 23.302201352050478 28.668569405835452 16.417932615309212 4 28.490342319774047 24.533948546830405 28.755950185529443 18.2197589478661 5 21.854848890660158 37.073709276967364 23.922530626591975 17.148911205780497 6 24.476024743860446 33.889880414576005 27.76901769646442 13.865077145099129 7 77.58720131491984 6.420630775362085 11.65926941746972 4.3328984922483595 8 78.04836390010372 6.302307793226876 11.304795546303149 4.344532760366256 9 72.26588510788928 8.324690144784753 13.313563328786893 6.095861418539082 10 40.50086761935645 25.205023033375497 20.531017701415173 13.76309164585288 11 31.345936298668992 23.879706618413334 27.108587327559107 17.66576975535857 12 27.892786506229285 21.42586619601514 31.52713383616475 19.154213461590825 13 24.34606749360734 25.05402508546236 32.05513157862166 18.544775842308635 14 19.428980219268823 27.888330829077752 32.31430346626929 20.36838548538414 15 19.60621715485211 24.23096250052602 36.810329249787735 19.352491094834136 16 21.34962460919998 23.137836372682738 34.6292752841113 20.883263734005975 17 20.938464623161103 23.479685825253295 31.693974191727786 23.887875359857812 18 22.864802378341448 24.259676864391466 32.03136796714681 20.84415279012028 19 23.724748068587722 24.8386673564715 29.99809396032962 21.438490614611155 20 24.799308874966272 24.981744100559684 30.559756819042573 19.65919020543147 21 23.4631008047448 25.46444245864265 30.092405793370446 20.980050943242098 22 22.11451585354684 23.907678369420193 30.36197426103832 23.615831515994643 23 21.868463459734294 25.6396990932697 29.990915369363258 22.500922077632747 24 21.33328712631102 24.02723903965305 32.981664888521436 21.657808945514496 25 21.43403493745962 25.351565304137097 30.3567759710282 22.857623787375086 26 19.354966471029435 27.01625579547452 31.279348679015495 22.349429054480556 27 21.426361271254198 25.559991979781127 31.370690060621964 21.64295668834271 28 19.58913705910456 25.720396357236393 33.39876577742903 21.291700806230025 29 20.58918904200466 24.342106891694865 32.8148245329584 22.25387953334208 30 21.43601523841586 25.898623443297797 31.706598610323805 20.958762707962542 31 24.227001898613544 25.003774948697828 28.877986231957603 21.89123692073103 32 23.38265107839764 26.354092663232493 29.711197859294668 20.5520583990752 33 23.567561680186348 26.22859109013092 29.1661200210902 21.03772720859253 34 20.560474678139208 26.116456548483956 30.43400770832147 22.889061065055362 35 21.756081380467794 25.04857925783271 30.714715368868184 22.480623992831312 36 22.79747214582936 27.51504409882692 28.575990336131333 21.111493419212383 37 22.42418541557853 27.12393465996995 29.536683837526205 20.91519608692531 38 21.608796496847607 28.229190131170185 28.49851106121853 21.663502310763675 39 22.346458603046198 25.969419202483294 30.003539787959276 21.680582406511228 40 22.591025771141567 25.710494852455202 29.856749979578147 21.841729396825084 41 20.388683570185577 25.707771938640374 29.622084316263965 24.281460174910084 42 21.865493008299936 25.863720638944105 28.906700595823047 23.36408575693291 43 23.321014211134738 24.743117835333024 29.879028365335824 22.056839588196418 44 21.86326516972417 26.499644783515976 29.116117421945198 22.520972624814657 45 21.719940888016456 26.920458736716512 27.94031372917899 23.41928664608804 46 21.789251421484778 27.135073852848784 28.771545055559816 22.304129670106615 47 21.394428918334864 25.640936781367348 30.98106584748217 21.983568452815618 48 22.09793083303835 24.825795400255952 30.20033219548541 22.875941571220288 49 21.466957440857072 24.447310379995 31.214741360318232 22.870990818829693 50 20.444379534579767 25.13001913465799 31.058792660014507 23.366808670747737 51 20.808259835288467 25.05575784879907 28.776743345569944 25.359238970342517 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 391.0 1 737.5 2 1084.0 3 4168.0 4 7252.0 5 4726.0 6 2200.0 7 2125.0 8 2050.0 9 2045.5 10 2041.0 11 1986.0 12 1931.0 13 1894.5 14 1858.0 15 1725.0 16 1592.0 17 1629.5 18 1667.0 19 1734.5 20 1802.0 21 1763.5 22 1725.0 23 1988.0 24 2251.0 25 2553.5 26 3552.5 27 4249.0 28 5072.5 29 5896.0 30 6308.5 31 6721.0 32 7637.5 33 8554.0 34 9997.0 35 11440.0 36 11607.5 37 11775.0 38 12935.5 39 14096.0 40 16592.5 41 19089.0 42 21957.5 43 24826.0 44 28394.5 45 31963.0 46 33429.0 47 34895.0 48 34505.0 49 34115.0 50 30053.0 51 25991.0 52 24537.5 53 23084.0 54 21405.5 55 19727.0 56 18603.5 57 17480.0 58 17177.5 59 16875.0 60 16367.0 61 15859.0 62 15124.0 63 14389.0 64 12380.0 65 10371.0 66 8637.0 67 6903.0 68 5904.0 69 4905.0 70 4264.0 71 3623.0 72 3037.5 73 2452.0 74 2033.0 75 1444.5 76 1275.0 77 909.5 78 544.0 79 458.0 80 372.0 81 243.5 82 115.0 83 86.5 84 58.0 85 36.5 86 15.0 87 9.0 88 3.0 89 2.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 403979.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.23285359903662 #Duplication Level Percentage of deduplicated Percentage of total 1 73.84112394494883 23.06269013760904 2 9.415527919419214 5.881476101297244 3 3.6906809454507292 3.4581149295005007 4 2.0291358868751477 2.535028163492913 5 1.3449419346358191 2.1003187271842814 6 0.9616913822122852 1.8021819688854883 7 0.710323671738322 1.552980467313321 8 0.5827293534103561 1.4560240466341539 9 0.4790891079960215 1.3466987973839506 >10 6.638650953904085 48.13154276869861 >50 0.2718275278607726 5.164677711946559 >100 0.031088778846246716 2.054517955986454 >500 0.0023914445266343632 0.4966993846574134 >1k 7.971481755447877E-4 0.9570488394100738 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3844 0.9515346094722746 No Hit GCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 753 0.1863958275058852 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 664 0.16436497936773942 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 578 0.1430767440881828 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 467 0.115600068320383 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 423 0.10470841306107496 No Hit CCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTCTGC 419 0.10371826258295605 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10124288638765877 0.0 2 0.0 0.0 0.0 0.5277502048373801 0.0 3 0.0 0.0 0.0 0.7057297532792546 0.0 4 0.0 0.0 0.0 0.9475740075597989 0.0 5 0.0 0.0 0.0 1.6899393285294533 0.0 6 0.0 0.0 0.0 2.261008616784536 0.0 7 0.0 0.0 0.0 2.8102945945210025 0.0 8 0.0 0.0 0.0 3.688062993373418 0.0 9 0.0 0.0 0.0 4.083380571762394 0.0 10 0.0 0.0 0.0 4.962386658712457 0.0 11 0.0 0.0 0.0 5.971845071154688 0.0 12 0.0 0.0 0.0 6.846395480953218 0.0 13 0.0 0.0 0.0 7.170917300156692 0.0 14 0.0 0.0 0.0 7.3048351523222745 0.0 15 0.0 0.0 0.0 7.53628282658257 0.0 16 0.0 0.0 0.0 8.037051430891209 0.0 17 0.0 0.0 0.0 8.62767619108914 0.0 18 0.0 0.0 0.0 9.2918196242874 0.0 19 0.0 0.0 0.0 9.694315793642739 0.0 20 0.0 0.0 0.0 10.071315588186515 0.0 21 0.0 0.0 0.0 10.538666613858641 0.0 22 2.47537619529728E-4 0.0 0.0 11.034484465776686 0.0 23 4.95075239059456E-4 0.0 0.0 11.512727146708121 0.0 24 4.95075239059456E-4 0.0 0.0 11.906064424140858 0.0 25 4.95075239059456E-4 0.0 0.0 12.242220511462229 0.0 26 4.95075239059456E-4 0.0 0.0 12.546444245864265 0.0 27 4.95075239059456E-4 0.0 0.0 12.864530086959967 0.0 28 4.95075239059456E-4 0.0 0.0 13.214053205735942 0.0 29 4.95075239059456E-4 0.0 0.0 13.555407583067437 0.0 30 4.95075239059456E-4 0.0 0.0 13.98934103010305 0.0 31 4.95075239059456E-4 0.0 0.0 14.357924545582815 0.0 32 4.95075239059456E-4 0.0 0.0 14.73566695298518 0.0 33 4.95075239059456E-4 0.0 0.0 15.097071877498584 0.0 34 4.95075239059456E-4 0.0 0.0 15.44510977055738 0.0 35 4.95075239059456E-4 0.0 0.0 15.833743833219053 0.0 36 4.95075239059456E-4 0.0 0.0 16.169404845301365 0.0 37 4.95075239059456E-4 0.0 0.0 16.51843288883828 0.0 38 4.95075239059456E-4 0.0 0.0 16.861272491886954 0.0 39 4.95075239059456E-4 0.0 0.0 17.231836308322958 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTACGG 65 0.0 45.000004 2 TCCGGAT 20 7.027849E-4 45.0 14 TAGCGAG 20 7.027849E-4 45.0 1 GCACGTC 20 7.027849E-4 45.0 38 CAACCGG 20 7.027849E-4 45.0 2 TTCGTTC 20 7.027849E-4 45.0 30 TAACGAC 20 7.027849E-4 45.0 21 GCGTTCG 25 3.886298E-5 45.0 10 TAGCCGT 20 7.027849E-4 45.0 44 ATCCGTC 20 7.027849E-4 45.0 28 TTATACG 25 3.886298E-5 45.0 1 TAACCGA 20 7.027849E-4 45.0 37 TCTACGG 20 7.027849E-4 45.0 2 AACGATC 20 7.027849E-4 45.0 33 GAACGAT 20 7.027849E-4 45.0 32 TCCGTCA 25 3.886298E-5 45.0 29 ATAACGG 45 3.8380676E-10 45.0 2 ATAACCG 20 7.027849E-4 45.0 36 CACGTCA 20 7.027849E-4 45.0 39 ATACGAG 20 7.027849E-4 45.0 1 >>END_MODULE