##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935971.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 508125 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.12099188191882 33.0 31.0 34.0 30.0 34.0 2 32.24784452644526 34.0 31.0 34.0 30.0 34.0 3 32.17432127921279 33.0 31.0 34.0 30.0 34.0 4 35.81382730627306 37.0 35.0 37.0 35.0 37.0 5 32.17088511685117 37.0 35.0 37.0 0.0 37.0 6 33.9303655596556 37.0 35.0 37.0 17.0 37.0 7 35.55666617466175 37.0 35.0 37.0 32.0 37.0 8 35.763642804428045 37.0 35.0 37.0 35.0 37.0 9 37.70720590405904 39.0 37.0 39.0 35.0 39.0 10 37.367852398523986 39.0 37.0 39.0 34.0 39.0 11 37.31387749077491 39.0 37.0 39.0 34.0 39.0 12 37.16191488314883 39.0 37.0 39.0 34.0 39.0 13 37.04610086100861 39.0 37.0 39.0 33.0 39.0 14 38.25373874538745 40.0 37.0 41.0 33.0 41.0 15 38.42292349323493 40.0 38.0 41.0 34.0 41.0 16 38.37990651906519 40.0 37.0 41.0 34.0 41.0 17 38.360724231242315 40.0 37.0 41.0 34.0 41.0 18 38.24703370233702 40.0 37.0 41.0 34.0 41.0 19 38.07453087330873 40.0 37.0 41.0 34.0 41.0 20 38.059371217712176 40.0 36.0 41.0 34.0 41.0 21 37.98818597785978 40.0 36.0 41.0 34.0 41.0 22 38.035221648216485 40.0 36.0 41.0 34.0 41.0 23 38.03401328413284 40.0 35.0 41.0 34.0 41.0 24 37.988363099630995 40.0 35.0 41.0 34.0 41.0 25 37.72384551045511 40.0 35.0 41.0 33.0 41.0 26 37.74795768757688 40.0 35.0 41.0 33.0 41.0 27 37.73841082410824 40.0 35.0 41.0 34.0 41.0 28 37.657523247232476 40.0 35.0 41.0 33.0 41.0 29 37.62089446494465 40.0 35.0 41.0 33.0 41.0 30 37.426741451414514 40.0 35.0 41.0 33.0 41.0 31 37.34778450184502 40.0 35.0 41.0 33.0 41.0 32 37.20479212792128 40.0 35.0 41.0 33.0 41.0 33 37.04030307503075 40.0 35.0 41.0 32.0 41.0 34 36.86250430504305 40.0 35.0 41.0 32.0 41.0 35 36.765449446494465 40.0 35.0 41.0 31.0 41.0 36 36.61501402214022 39.0 35.0 41.0 31.0 41.0 37 36.50418105781058 39.0 35.0 41.0 31.0 41.0 38 36.38530086100861 39.0 35.0 41.0 30.0 41.0 39 36.271954735547354 39.0 35.0 41.0 30.0 41.0 40 36.191429274292744 39.0 35.0 41.0 30.0 41.0 41 36.09518917589176 39.0 35.0 41.0 30.0 41.0 42 36.04804723247233 39.0 35.0 41.0 30.0 41.0 43 35.95987798277983 39.0 35.0 41.0 30.0 41.0 44 35.88356211562115 39.0 35.0 41.0 29.0 41.0 45 35.87790012300123 38.0 35.0 41.0 29.0 41.0 46 35.77601574415744 38.0 35.0 41.0 29.0 41.0 47 35.68738794587946 38.0 35.0 41.0 29.0 41.0 48 35.65843640836408 38.0 35.0 41.0 29.0 41.0 49 35.60449889298893 38.0 35.0 40.0 29.0 41.0 50 35.47384403444035 38.0 35.0 40.0 28.0 41.0 51 34.5119704797048 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 6.0 8 16.0 9 22.0 10 20.0 11 17.0 12 16.0 13 9.0 14 18.0 15 24.0 16 54.0 17 79.0 18 147.0 19 289.0 20 569.0 21 1011.0 22 1499.0 23 2056.0 24 2949.0 25 4330.0 26 5552.0 27 6408.0 28 6793.0 29 7133.0 30 7853.0 31 9726.0 32 12352.0 33 18683.0 34 33255.0 35 45624.0 36 38658.0 37 56819.0 38 91145.0 39 154881.0 40 112.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.24526445264453 18.94277982779828 22.68929889298893 15.122656826568265 2 34.0530381303813 24.065731857318575 24.415448954489545 17.465781057810577 3 31.17579335793358 23.973628536285364 28.323542435424354 16.527035670356703 4 28.13579335793358 24.675227552275523 28.810627306273062 18.378351783517836 5 23.503468634686346 35.74848708487085 23.357244772447725 17.39079950799508 6 25.97687576875769 34.04792127921279 25.834194341943416 14.1410086100861 7 76.369987699877 6.303763837638376 12.454022140221403 4.872226322263223 8 77.23768757687577 7.069126691266912 11.493628536285364 4.1995571955719555 9 71.49638376383763 8.041525215252152 13.205412054120542 7.256678966789668 10 41.03950799507995 24.741549815498153 20.29421894218942 13.924723247232473 11 33.67143911439114 23.799655596555965 25.2689790897909 17.259926199261994 12 29.179237392373924 21.4640098400984 29.473849938499384 19.88290282902829 13 25.855055350553506 23.31552275522755 31.39719557195572 19.432226322263222 14 21.61908979089791 27.18071340713407 30.68221402214022 20.517982779827797 15 20.005707257072572 23.50209102091021 35.865584255842556 20.62661746617466 16 22.55271832718327 22.83788437884379 33.252250922509226 21.357146371463713 17 22.51690036900369 22.88610086100861 30.570824108241084 24.02617466174662 18 23.742386223862237 23.430061500615007 31.560344403444034 21.26720787207872 19 25.14538745387454 24.822041820418203 28.403837638376384 21.628733087330872 20 25.89953259532595 24.7370233702337 29.622829028290283 19.740615006150062 21 24.217859778597788 26.119753997539974 29.4039852398524 20.25840098400984 22 22.33938499384994 23.59773677736777 30.30769987699877 23.755178351783517 23 22.654071340713408 25.387847478474786 29.342779827798278 22.615301353013532 24 22.871143911439116 24.128314883148832 30.917982779827796 22.082558425584256 25 21.97963099630996 25.43783517835178 29.81648216482165 22.766051660516606 26 20.366445264452647 26.532054120541204 30.05677736777368 23.044723247232472 27 21.95719557195572 25.69643296432964 29.990061500615006 22.35630996309963 28 20.20428044280443 25.12570725707257 32.60634686346863 22.063665436654368 29 21.510258302583026 23.73648216482165 31.20610086100861 23.547158671586715 30 22.088659286592865 25.375252152521526 31.094317343173433 21.441771217712176 31 23.66878228782288 24.777170971709715 29.009790897908978 22.544255842558425 32 25.635227552275524 25.382337023370233 27.530036900369005 21.452398523985238 33 25.395325953259533 25.494907749077488 27.268487084870845 21.841279212792127 34 22.649348093480935 26.160885608856088 28.843296432964326 22.346469864698648 35 24.329249692496923 24.821648216482163 28.19030750307503 22.65879458794588 36 24.660861008610084 27.430651906519067 27.127773677736776 20.780713407134073 37 23.12088560885609 27.61210332103321 28.97849938499385 20.288511685116852 38 23.80319803198032 26.924280442804427 27.044132841328413 22.228388683886838 39 24.24088560885609 25.967232472324724 27.222829028290285 22.569052890528905 40 24.021057810578107 25.91134071340713 28.634292742927432 21.43330873308733 41 22.03453874538745 25.24575645756458 27.774858548585485 24.944846248462486 42 23.925608856088562 24.290086100861007 28.087380073800738 23.696924969249693 43 23.7040098400984 24.427453874538745 28.370578105781057 23.497958179581797 44 22.76861008610086 25.24870848708487 28.67247232472325 23.31020910209102 45 22.60211562115621 25.82848708487085 27.286789667896677 24.28260762607626 46 23.762460024600244 26.653874538745388 27.19940959409594 22.384255842558424 47 22.558228782287824 26.160885608856088 29.025731857318572 22.255153751537517 48 22.83552275522755 24.693136531365315 29.49431734317343 22.977023370233702 49 22.278376383763838 24.839950799507996 29.6720295202952 23.209643296432965 50 22.310061500615006 24.656334563345634 29.44649446494465 23.58710947109471 51 21.601180811808117 25.424452644526447 27.73431734317343 25.240049200492003 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 367.0 1 788.5 2 1210.0 3 4473.5 4 7737.0 5 5157.5 6 2578.0 7 2478.0 8 2378.0 9 2339.5 10 2301.0 11 2257.5 12 2214.0 13 2122.5 14 2031.0 15 2041.0 16 2051.0 17 2075.0 18 2099.0 19 2061.5 20 2024.0 21 2138.0 22 2252.0 23 2458.5 24 2665.0 25 3025.5 26 3832.5 27 4279.0 28 4887.5 29 5496.0 30 6884.5 31 8273.0 32 9726.5 33 11180.0 34 11428.0 35 11676.0 36 12275.0 37 12874.0 38 14795.5 39 16717.0 40 18606.0 41 20495.0 42 24022.5 43 27550.0 44 30222.0 45 32894.0 46 36827.0 47 40760.0 48 40687.0 49 40614.0 50 39730.0 51 38846.0 52 35652.5 53 32459.0 54 30923.0 55 29387.0 56 27793.5 57 26200.0 58 24425.5 59 22651.0 60 22199.5 61 21748.0 62 20002.5 63 18257.0 64 16029.0 65 13801.0 66 11778.5 67 9756.0 68 9138.0 69 8520.0 70 7494.0 71 6468.0 72 5357.5 73 4247.0 74 3549.0 75 2445.0 76 2039.0 77 1753.5 78 1468.0 79 1074.0 80 680.0 81 544.5 82 409.0 83 264.5 84 120.0 85 86.0 86 52.0 87 51.0 88 50.0 89 28.0 90 6.0 91 5.5 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 508125.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.963507165795487 #Duplication Level Percentage of deduplicated Percentage of total 1 73.69332053583403 22.08110337946727 2 9.109200616323362 5.4588719588374754 3 3.618074559491804 3.2523060896914506 4 1.995156109042907 2.3912749748075117 5 1.3448465411133772 2.0148159485772976 6 0.967178522956472 1.738803636192585 7 0.7196377206758615 1.5094009000173536 8 0.560486637998833 1.3435316315208523 9 0.48711829698222164 1.3136195323995203 >10 7.20051533680167 50.482983507206114 >50 0.2699723419852896 4.841466882617575 >100 0.030512844548705946 1.681266405027385 >500 0.0013266454151611281 0.3193988784583293 >1k 0.0026532908303222563 1.571156275179274 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4079 0.8027552275522756 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTGAAGGTCGTATGCCGTCTTC 1282 0.25230012300123 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTGAAGGTCGTATGC 1282 0.25230012300123 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTGAAGGTCGTATGCCG 1262 0.2483640836408364 No Hit GCTGTCTCTTATACACATCTGACGCCTTGAAGGTCGTATGCCGTCTTCTGC 849 0.1670848708487085 Illumina Single End Adapter 1 (95% over 21bp) GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC 758 0.14917589175891757 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.968019680196802E-4 0.0 0.0 0.0854120541205412 0.0 2 1.968019680196802E-4 0.0 0.0 0.42469864698646986 0.0 3 1.968019680196802E-4 0.0 0.0 0.5681672816728167 0.0 4 1.968019680196802E-4 0.0 0.0 0.7974415744157441 0.0 5 1.968019680196802E-4 0.0 0.0 1.6029520295202953 0.0 6 1.968019680196802E-4 0.0 0.0 2.074292742927429 0.0 7 3.936039360393604E-4 0.0 0.0 2.5344157441574415 0.0 8 3.936039360393604E-4 0.0 0.0 3.270651906519065 0.0 9 3.936039360393604E-4 0.0 0.0 3.5644772447724478 0.0 10 3.936039360393604E-4 0.0 0.0 4.433751537515375 0.0 11 3.936039360393604E-4 0.0 0.0 5.2876752767527675 0.0 12 3.936039360393604E-4 0.0 0.0 6.237244772447725 0.0 13 5.904059040590406E-4 0.0 0.0 6.515522755227552 0.0 14 5.904059040590406E-4 0.0 0.0 6.632423124231242 0.0 15 5.904059040590406E-4 0.0 0.0 6.88 0.0 16 5.904059040590406E-4 0.0 0.0 7.286789667896679 0.0 17 5.904059040590406E-4 0.0 0.0 7.742189421894219 0.0 18 5.904059040590406E-4 0.0 0.0 8.269421894218942 0.0 19 5.904059040590406E-4 0.0 0.0 8.61480934809348 0.0 20 5.904059040590406E-4 0.0 0.0 8.94760147601476 0.0 21 5.904059040590406E-4 0.0 0.0 9.3169987699877 0.0 22 5.904059040590406E-4 0.0 0.0 9.724182041820418 0.0 23 5.904059040590406E-4 0.0 0.0 10.12309963099631 0.0 24 5.904059040590406E-4 0.0 0.0 10.431881918819188 0.0 25 5.904059040590406E-4 0.0 0.0 10.729052890528905 0.0 26 5.904059040590406E-4 0.0 0.0 10.99670356703567 0.0 27 5.904059040590406E-4 0.0 0.0 11.266912669126691 0.0 28 7.872078720787208E-4 0.0 0.0 11.54479704797048 0.0 29 9.840098400984009E-4 0.0 0.0 11.837441574415744 0.0 30 9.840098400984009E-4 0.0 0.0 12.190897908979089 0.0 31 9.840098400984009E-4 0.0 0.0 12.515227552275523 0.0 32 9.840098400984009E-4 0.0 0.0 12.824009840098402 0.0 33 9.840098400984009E-4 0.0 0.0 13.133185731857319 0.0 34 9.840098400984009E-4 0.0 0.0 13.438031980319803 0.0 35 0.0011808118081180813 0.0 0.0 13.761771217712177 0.0 36 0.0011808118081180813 0.0 0.0 14.060319803198032 0.0 37 0.0011808118081180813 0.0 0.0 14.365953259532596 0.0 38 0.0011808118081180813 0.0 0.0 14.680836408364083 0.0 39 0.0011808118081180813 0.0 0.0 15.04629766297663 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGTA 65 0.0 45.000004 26 GCGACAC 20 7.029567E-4 45.0 35 ATTAGCG 20 7.029567E-4 45.0 1 GCGATAT 45 3.8380676E-10 45.0 9 CATCGTT 40 6.8030204E-9 45.0 36 CCAGTCG 40 6.8030204E-9 45.0 28 CTAGGCG 20 7.029567E-4 45.0 1 AGTAACG 25 3.887723E-5 45.0 1 TACGTAG 20 7.029567E-4 45.0 1 TATAGCG 30 2.1631022E-6 44.999996 1 CGTACAC 75 0.0 42.0 29 CACGCGT 70 0.0 41.785717 25 TACGGGA 135 0.0 41.666668 4 ACGGGTA 60 3.6379788E-12 41.249996 5 CGTTTTT 1885 0.0 40.941643 1 CGTTATT 165 0.0 40.90909 1 CGCAGTA 50 1.0786607E-9 40.5 37 CGCATCG 45 1.9246727E-8 40.0 21 CGATGAA 225 0.0 40.0 19 GCATCGT 45 1.9246727E-8 40.0 35 >>END_MODULE