##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935970.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 869780 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06327002230449 33.0 31.0 34.0 30.0 34.0 2 32.2138529283267 33.0 31.0 34.0 30.0 34.0 3 32.05181655131182 33.0 31.0 34.0 30.0 34.0 4 35.764507116742166 37.0 35.0 37.0 35.0 37.0 5 32.22560072662053 37.0 35.0 37.0 0.0 37.0 6 33.945786290786174 37.0 35.0 37.0 18.0 37.0 7 35.53931683874083 37.0 35.0 37.0 32.0 37.0 8 35.7606509692106 37.0 35.0 37.0 35.0 37.0 9 37.71855756628113 39.0 38.0 39.0 35.0 39.0 10 37.37306560279611 39.0 37.0 39.0 34.0 39.0 11 37.309847317712524 39.0 37.0 39.0 34.0 39.0 12 37.29254294189335 39.0 37.0 39.0 34.0 39.0 13 37.2691439214514 39.0 37.0 39.0 34.0 39.0 14 38.5507933040539 40.0 38.0 41.0 34.0 41.0 15 38.64331785049093 40.0 38.0 41.0 34.0 41.0 16 38.607378877417275 40.0 38.0 41.0 34.0 41.0 17 38.523829014233485 40.0 38.0 41.0 34.0 41.0 18 38.337796914162205 40.0 38.0 41.0 34.0 41.0 19 38.08281059578284 40.0 37.0 41.0 34.0 41.0 20 37.9253765319966 40.0 35.0 41.0 34.0 41.0 21 37.89461932902573 40.0 35.0 41.0 34.0 41.0 22 37.925878957897396 40.0 35.0 41.0 34.0 41.0 23 37.88463864425487 40.0 35.0 41.0 34.0 41.0 24 37.85938398215641 40.0 35.0 41.0 34.0 41.0 25 37.65006208466509 40.0 35.0 41.0 33.0 41.0 26 37.646831382648486 40.0 35.0 41.0 33.0 41.0 27 37.60660856768378 40.0 35.0 41.0 33.0 41.0 28 37.486221803214605 40.0 35.0 41.0 33.0 41.0 29 37.41294695210283 40.0 35.0 41.0 33.0 41.0 30 37.19727057416818 39.0 35.0 41.0 33.0 41.0 31 36.99476649267631 39.0 35.0 41.0 32.0 41.0 32 36.670438501690086 39.0 35.0 41.0 31.0 41.0 33 36.33448458230817 39.0 35.0 41.0 30.0 41.0 34 35.96464163351652 39.0 35.0 41.0 27.0 41.0 35 35.78936972567776 39.0 35.0 41.0 25.0 41.0 36 35.57862218032146 39.0 35.0 41.0 24.0 41.0 37 35.460333647589046 39.0 35.0 41.0 23.0 41.0 38 35.324462507760586 39.0 35.0 41.0 23.0 41.0 39 35.246101312975696 39.0 35.0 41.0 22.0 41.0 40 35.21590517142266 39.0 35.0 41.0 22.0 41.0 41 35.1114097817839 39.0 35.0 41.0 22.0 41.0 42 35.0715123364529 39.0 35.0 41.0 21.0 41.0 43 34.975782381751706 39.0 35.0 41.0 21.0 41.0 44 34.935481386097635 39.0 35.0 41.0 21.0 41.0 45 34.89915610844122 39.0 35.0 41.0 20.0 41.0 46 34.777708156085446 38.0 35.0 41.0 20.0 41.0 47 34.63862585941273 38.0 34.0 41.0 20.0 41.0 48 34.59697969601508 38.0 34.0 41.0 20.0 41.0 49 34.540388374071604 38.0 34.0 41.0 20.0 41.0 50 34.455017360711906 38.0 34.0 40.0 20.0 41.0 51 33.53312446825634 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 2.0 8 17.0 9 33.0 10 36.0 11 28.0 12 18.0 13 20.0 14 21.0 15 60.0 16 86.0 17 178.0 18 378.0 19 712.0 20 1382.0 21 2576.0 22 4047.0 23 5944.0 24 8508.0 25 12684.0 26 16839.0 27 17897.0 28 16146.0 29 15110.0 30 15318.0 31 17120.0 32 20700.0 33 28848.0 34 47187.0 35 62979.0 36 62200.0 37 92308.0 38 153579.0 39 266632.0 40 186.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.313527558693 17.543861666168457 21.38575271907839 20.756858056060153 2 37.68585159465612 23.929039527236775 22.912115707420266 15.472993170686841 3 28.41488652302881 24.00377106854607 32.48568603554922 15.095656372875899 4 24.912161696061073 23.32773804870197 35.138540780427235 16.62155947480972 5 22.60088758076755 34.23061003932028 27.602382211593735 15.566120168318426 6 22.508105497942008 33.19609556439559 30.487364620938628 13.808434316723769 7 72.87762422681597 4.866747913265423 18.379130354802363 3.8764975051162365 8 74.40375727195384 6.535560716503023 15.434707627216076 3.6259743843270713 9 69.06470601761366 6.3589643358090555 16.875991630067375 7.700338016509923 10 36.97969601508427 26.235139920439654 23.64172549380303 13.143438570673045 11 27.6495205684196 23.256800570259145 32.44153694037573 16.652141920945525 12 24.11287911885764 20.53312331854032 35.098760606130284 20.25523695647175 13 23.335096231230885 21.29837430154752 37.42245165444135 17.944077812780243 14 19.543677711605234 26.0787785417002 35.432983053185865 18.944560693508702 15 18.9260502655844 23.48720366069581 38.602060291108096 18.984685782611695 16 21.875531743659316 23.2355308238865 35.17590655108188 19.7130308813723 17 21.02531674676355 24.108510197981097 34.98263928809584 19.883533767159513 18 21.928648623789922 23.26599829842029 34.49607946837131 20.309273609418472 19 21.843684609901352 25.17395203384764 32.84106325737543 20.14130009887558 20 24.406631562004186 24.478028926855067 33.22805766975557 17.887281841385178 21 22.661707558233115 25.915863781645932 33.909839269700385 17.512589390420565 22 21.618915127963394 22.52500632343811 34.73073650808251 21.125342040515992 23 21.599484927222974 24.87594564142657 33.96399089424912 19.560578537101335 24 21.456690197521212 24.073673802570767 34.18657591574881 20.283060084159214 25 20.53680240980478 26.834946768148267 32.27873715192347 20.34951367012348 26 20.65579801788958 24.814435834348917 34.40927590885051 20.12049023891099 27 22.70585665340661 23.958932143760492 32.99466531766654 20.340545885166364 28 19.74993676561889 25.993584584607603 34.4518154015958 19.8046632481777 29 21.92025569684288 23.920761571891745 34.21451401503828 19.944468716227092 30 22.58490652808756 24.465497022235507 34.05757777828876 18.892018671388165 31 22.297477523051807 23.87523281749408 32.744717054887445 21.08257260456667 32 23.578606084297178 25.41769183011796 32.03016854836855 18.97353353721631 33 22.850260985536572 24.593460415277427 31.948423739336384 20.607854859849617 34 21.551886683989053 25.56887948676677 32.64883073880752 20.230403090436663 35 22.329324656809767 25.61866219043896 31.22387270344225 20.82814044930902 36 21.958541240313643 28.041573731288373 30.560256616615693 19.43962841178229 37 21.673526638920187 27.967417047989144 30.90988525834119 19.449171054749474 38 21.25675458161834 26.766998551357812 30.365954609211528 21.61029225781232 39 21.753661845524157 26.836211455770425 30.64269125525995 20.76743544344547 40 21.42771735381361 25.10876313550553 32.126974637264595 21.336544873416265 41 20.309273609418472 26.596725608774634 31.018188507438666 22.075812274368232 42 21.49187150773759 26.637885442295755 30.098875577732297 21.771367472234356 43 22.060521051300327 26.224907447860378 30.03173216215595 21.682839338683348 44 21.841845064269126 25.948860631424036 30.458161834027 21.751132470279842 45 21.105336981765504 25.050817448090324 30.570489089194968 23.273356480949207 46 22.709535744671065 26.68835797558003 29.464347306215366 21.137758973533536 47 20.789509991032215 26.1929453425004 32.334038492492354 20.683506173975026 48 21.43093655867001 25.74524592425671 30.716847938559177 22.106969578514107 49 21.048196095564396 25.16222493044218 31.70870794913656 22.08087102485686 50 20.729724757984776 24.987008208972384 31.684218997907514 22.599048035135322 51 20.365839637609508 24.98401894732001 30.721331831037734 23.928809584032745 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 538.0 1 916.0 2 1294.0 3 13382.0 4 25470.0 5 17014.5 6 8559.0 7 8213.0 8 7867.0 9 7890.5 10 7914.0 11 7744.0 12 7574.0 13 7351.0 14 7128.0 15 6780.0 16 6432.0 17 6045.0 18 5658.0 19 5443.5 20 5229.0 21 5278.0 22 5327.0 23 5406.0 24 5485.0 25 5869.0 26 7419.0 27 8585.0 28 9670.0 29 10755.0 30 12922.0 31 15089.0 32 16559.0 33 18029.0 34 20472.5 35 22916.0 36 24640.0 37 26364.0 38 29676.5 39 32989.0 40 35653.5 41 38318.0 42 42997.0 43 47676.0 44 61987.0 45 76298.0 46 72577.0 47 68856.0 48 68651.5 49 68447.0 50 62276.5 51 56106.0 52 52817.5 53 49529.0 54 46235.5 55 42942.0 56 41082.5 57 39223.0 58 36903.0 59 34583.0 60 32364.5 61 30146.0 62 27746.5 63 25347.0 64 22145.5 65 18944.0 66 15372.5 67 11801.0 68 10105.5 69 8410.0 70 7267.0 71 6124.0 72 5080.0 73 4036.0 74 3549.0 75 2578.0 76 2094.0 77 1597.0 78 1100.0 79 841.0 80 582.0 81 498.5 82 415.0 83 284.0 84 153.0 85 109.5 86 66.0 87 48.5 88 31.0 89 19.5 90 8.0 91 6.5 92 5.0 93 11.5 94 18.0 95 10.0 96 2.0 97 2.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 869780.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.15073262962667 #Duplication Level Percentage of deduplicated Percentage of total 1 74.31455051523615 26.122108956519508 2 8.933284326992952 6.2802297776512725 3 3.6744705951945233 3.8748100034132356 4 2.160257822747431 3.0373858055381753 5 1.4523716723307278 2.552596416647058 6 1.0512929773891566 2.217223101816624 7 0.8508411956351771 2.0935383964630794 8 0.6994389833194339 1.966863415471946 9 0.5769595978704121 1.8252497306555797 >10 6.184257712967511 42.30580853930111 >50 0.0728168844713078 1.6503386559354287 >100 0.02349997556189293 1.5424868058348549 >500 0.0036408412842334707 0.9276095416288141 >1k 0.0016549278564697595 1.3702979030859368 >5k 3.309855712939519E-4 0.645359353745771 >10k+ 3.309855712939519E-4 1.5880935962916485 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13650 1.5693623674952286 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 5547 0.6377474763733358 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCG 3525 0.4052748971004162 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGC 3520 0.4047000390903447 No Hit GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 1629 0.18728873968129872 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1565 0.17993055715238337 No Hit GAACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCT 1539 0.1769412955000115 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT 894 0.10278461220078641 No Hit CGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG 875 0.10060015176251466 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.2994320402860494E-4 0.0 0.0 0.07542137092138242 0.0 2 2.2994320402860494E-4 0.0 0.0 0.4072294143346593 0.0 3 2.2994320402860494E-4 0.0 0.0 0.6208466508772333 0.0 4 2.2994320402860494E-4 0.0 0.0 0.9639219112879119 0.0 5 3.449148060429074E-4 0.0 0.0 2.054772471199614 0.0 6 3.449148060429074E-4 0.0 0.0 2.7842672859803628 0.0 7 3.449148060429074E-4 0.0 0.0 3.3882131113614937 0.0 8 3.449148060429074E-4 0.0 0.0 4.215318816252386 0.0 9 3.449148060429074E-4 0.0 0.0 4.656464853181264 0.0 10 3.449148060429074E-4 0.0 0.0 5.787440502195958 0.0 11 3.449148060429074E-4 0.0 0.0 6.542573984225896 0.0 12 3.449148060429074E-4 0.0 0.0 7.615948860631424 0.0 13 3.449148060429074E-4 0.0 0.0 7.984547816689278 0.0 14 3.449148060429074E-4 0.0 0.0 8.186208006622364 0.0 15 4.598864080572099E-4 0.0 0.0 8.440065303869945 0.0 16 4.598864080572099E-4 0.0 0.0 8.767964312814735 0.0 17 4.598864080572099E-4 0.0 0.0 9.15530364000092 0.0 18 4.598864080572099E-4 0.0 0.0 9.563682770355722 0.0 19 4.598864080572099E-4 0.0 0.0 9.940559681758605 0.0 20 4.598864080572099E-4 0.0 0.0 10.223734737519832 0.0 21 5.748580100715123E-4 0.0 0.0 10.54324081951758 0.0 22 5.748580100715123E-4 0.0 0.0 10.917703327278163 0.0 23 5.748580100715123E-4 0.0 0.0 11.274690151532571 0.0 24 5.748580100715123E-4 0.0 0.0 11.570052197107314 0.0 25 5.748580100715123E-4 0.0 0.0 11.846328956747683 0.0 26 5.748580100715123E-4 0.0 0.0 12.114097817838994 0.0 27 5.748580100715123E-4 0.0 0.0 12.408540090597622 0.0 28 6.898296120858149E-4 0.0 0.0 12.690680401940721 0.0 29 6.898296120858149E-4 0.0 0.0 12.996504863298766 0.0 30 6.898296120858149E-4 0.0 0.0 13.354296488767275 0.0 31 6.898296120858149E-4 0.0 0.0 13.658856262503162 0.0 32 8.048012141001173E-4 0.0 0.0 13.977557543286808 0.0 33 8.048012141001173E-4 0.0 0.0 14.290050357561682 0.0 34 8.048012141001173E-4 0.0 0.0 14.59300052886937 0.0 35 8.048012141001173E-4 0.0 0.0 14.905378371542229 0.0 36 8.048012141001173E-4 0.0 0.0 15.229023431212491 0.0 37 9.197728161144198E-4 0.0 0.0 15.555772724137139 0.0 38 9.197728161144198E-4 0.0 0.0 15.910575087953276 0.0 39 9.197728161144198E-4 0.0 0.0 16.26342293453517 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGT 25 3.8900194E-5 45.000004 40 CGCGCAA 25 3.8900194E-5 45.000004 18 CATACCG 20 7.032338E-4 45.000004 1 CTCGACG 25 3.8900194E-5 45.000004 1 CCGCGTA 20 7.032338E-4 45.000004 40 CGTTATT 1040 0.0 44.134613 1 CGTTTTT 7875 0.0 43.285713 1 CCCATCG 180 0.0 42.500004 40 CGATCAC 75 0.0 42.0 34 CCGATGA 1025 0.0 41.707317 18 CGATGAA 1040 0.0 41.322113 19 TCTACGG 40 3.4569348E-7 39.375004 2 TATAGCG 40 3.4569348E-7 39.375004 1 TACGGCT 520 0.0 39.375 7 ACGGGAC 260 0.0 38.942307 5 TAGCCGT 35 6.246535E-6 38.57143 44 ATAACGG 70 0.0 38.57143 2 GCTAACG 35 6.246535E-6 38.57143 1 AAGGGCG 490 0.0 37.65306 5 GCGAATC 30 1.13969334E-4 37.500004 17 >>END_MODULE