##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935969.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 441630 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03605733306161 33.0 31.0 34.0 30.0 34.0 2 32.15746892194824 33.0 31.0 34.0 30.0 34.0 3 32.222262980322895 34.0 31.0 34.0 30.0 34.0 4 35.78271856531486 37.0 35.0 37.0 35.0 37.0 5 35.809521545184886 37.0 35.0 37.0 35.0 37.0 6 35.824045015057855 37.0 35.0 37.0 35.0 37.0 7 35.99672576591264 37.0 35.0 37.0 35.0 37.0 8 35.589529696805016 37.0 35.0 37.0 33.0 37.0 9 37.39758168602676 39.0 37.0 39.0 34.0 39.0 10 37.13558861490388 39.0 37.0 39.0 34.0 39.0 11 37.1064692163123 39.0 37.0 39.0 34.0 39.0 12 36.965466567035755 39.0 37.0 39.0 33.0 39.0 13 36.91036614360438 39.0 37.0 39.0 33.0 39.0 14 38.05280211942124 40.0 37.0 41.0 33.0 41.0 15 38.1397391481557 40.0 37.0 41.0 33.0 41.0 16 38.28706609605326 40.0 37.0 41.0 34.0 41.0 17 38.18447116364377 40.0 37.0 41.0 34.0 41.0 18 38.17823517424088 40.0 37.0 41.0 34.0 41.0 19 38.21024160496343 40.0 37.0 41.0 34.0 41.0 20 38.02334533432964 40.0 36.0 41.0 34.0 41.0 21 38.05765006906234 40.0 36.0 41.0 34.0 41.0 22 38.02735547856803 40.0 36.0 41.0 34.0 41.0 23 38.02733283517877 40.0 36.0 41.0 34.0 41.0 24 37.92930054570568 40.0 36.0 41.0 34.0 41.0 25 37.8836107148518 40.0 36.0 41.0 33.0 41.0 26 37.72147951905441 40.0 36.0 41.0 33.0 41.0 27 37.67284831193533 40.0 36.0 41.0 33.0 41.0 28 37.66644702579082 40.0 36.0 41.0 33.0 41.0 29 37.6752779476032 40.0 36.0 41.0 33.0 41.0 30 37.55214772547155 40.0 36.0 41.0 33.0 41.0 31 37.58905192129158 40.0 36.0 41.0 33.0 41.0 32 37.50340330140615 40.0 35.0 41.0 33.0 41.0 33 37.45602427371329 40.0 35.0 41.0 33.0 41.0 34 37.35723795937776 40.0 35.0 41.0 33.0 41.0 35 37.34868555125331 40.0 35.0 41.0 33.0 41.0 36 37.29956071824831 40.0 35.0 41.0 33.0 41.0 37 37.294724090301834 40.0 35.0 41.0 33.0 41.0 38 37.19722165613749 40.0 35.0 41.0 32.0 41.0 39 37.13492742793741 40.0 35.0 41.0 32.0 41.0 40 37.041817811289995 39.0 35.0 41.0 32.0 41.0 41 36.95100423431379 39.0 35.0 41.0 32.0 41.0 42 36.98405226094242 39.0 35.0 41.0 32.0 41.0 43 36.93465797160519 39.0 35.0 41.0 32.0 41.0 44 36.882381178814846 39.0 35.0 41.0 32.0 41.0 45 36.763987953716914 39.0 35.0 41.0 31.0 41.0 46 36.689131173153996 39.0 35.0 41.0 31.0 41.0 47 36.599719221973146 39.0 35.0 41.0 31.0 41.0 48 36.59132305323461 39.0 35.0 41.0 31.0 41.0 49 36.57330117972058 39.0 35.0 41.0 31.0 41.0 50 36.46005253266309 39.0 35.0 41.0 31.0 41.0 51 35.53435002151122 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 9.0 10 19.0 11 11.0 12 13.0 13 14.0 14 13.0 15 29.0 16 37.0 17 66.0 18 104.0 19 167.0 20 396.0 21 642.0 22 1024.0 23 1422.0 24 1824.0 25 2400.0 26 3047.0 27 3632.0 28 4314.0 29 4931.0 30 6130.0 31 7935.0 32 10360.0 33 14606.0 34 29184.0 35 36377.0 36 30378.0 37 44750.0 38 82433.0 39 155219.0 40 137.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.602653805221564 20.493173018137355 23.069537848425153 10.834635328215928 2 31.49401082354007 27.50741570998347 23.0428186490954 17.955754817381063 3 31.489935013472813 26.929103548219096 24.69940900754025 16.881552430767837 4 28.98897266942916 23.859565699793944 28.562597649616194 18.5888639811607 5 28.401150284174538 27.52168104521885 22.980096460838258 21.09707220976836 6 25.385050834408894 35.83225777234336 23.40556574508072 15.377125648167016 7 76.38543577202636 6.016348527047528 12.155197790005207 5.443017910920907 8 75.24986980051173 8.530896904648689 9.93410773724611 6.28512555759346 9 70.02445486040351 7.399859610986573 11.157530059099246 11.418155469510676 10 41.28523877453977 25.188506215610353 18.625093403980706 14.901161605869168 11 32.60580123632905 23.731404116568168 23.582410615220887 20.08038403188189 12 29.97984738355637 19.965582048320993 28.050857052283583 22.003713515839053 13 26.532391368340015 22.140253153091955 29.907614971808982 21.41974050675905 14 20.088535652016393 28.31963408282952 27.673165319385006 23.918664945769084 15 19.119398591581188 25.295835880714623 34.43561352263207 21.149152005072118 16 22.18984217557684 24.997169576342188 30.24930371578018 22.563684532300794 17 20.91049068224532 25.748250798179473 28.581391662704075 24.759866856871138 18 22.2419219708806 26.58152752303965 28.52433032176256 22.65222018431719 19 23.272422616217195 27.97590743382469 26.370944002898355 22.38072594705976 20 26.849172384122454 26.446799356927748 28.108371261010344 18.595656997939454 21 24.33258610148767 28.59022258451645 27.028960894866742 20.048230419129133 22 21.59386817018771 24.385571632361934 28.68690985666735 25.33365034078301 23 23.49908294273487 26.91891402305097 27.830084006974165 21.751919027239996 24 24.603627470959854 23.864773679324323 27.347100514004936 24.184498335710888 25 21.825736476235765 27.85363313180717 25.40022190521477 24.920408486742296 26 21.162058736951746 25.801236329053733 28.320313384507394 24.716391549487128 27 22.44684464370627 26.759278128750314 27.091456649231255 23.70242057831216 28 18.636415098611963 27.69807304757376 30.14899350134728 23.516518352466996 29 24.09030183637887 24.444670878337067 28.19894481806037 23.266082467223693 30 22.204560378597467 25.968344541811017 28.24423159658538 23.582863483006136 31 22.749813192038584 26.49752054887576 26.48846319317075 24.264203065914906 32 24.866064352512286 27.32490999252768 26.296900120009965 21.512125534950073 33 22.393179811154134 27.81876231234291 25.150012453864097 24.63804542263886 34 22.447976813169397 26.66779883612979 28.086633607318344 22.79759074338247 35 20.932681203722574 25.611484727033947 25.850146049860744 27.60568801938274 36 21.42041980843693 30.95668319634083 25.342934130380634 22.27996286484161 37 20.28258949799606 27.11636437742001 29.390213527160746 23.21083259742318 38 19.772886805697077 28.307859520413015 27.056359395874374 24.86289427801553 39 22.932318909494374 27.12927110929964 26.908950931775465 23.02945904943052 40 21.477254715485813 25.84290016529674 28.765255983515615 23.91458913570183 41 18.94459162647465 28.91832529493015 26.1236781921518 26.013404886443404 42 20.811539071168173 25.394561057899146 27.923827638520933 25.870072232411744 43 22.77336231687159 25.13959649480334 27.32921223648756 24.75782895183751 44 21.666553449720354 24.388968140751306 27.924280506306182 26.020197903222154 45 22.322079568869867 23.397414124946224 27.157348911985146 27.123157394198767 46 23.381337318569845 26.547336005253264 26.271765957928583 23.79956071824831 47 19.587437447637164 25.38935307836877 31.51303127052057 23.510178203473494 48 19.926182551004235 25.0406448837262 28.81620360935625 26.216968955913323 49 20.455584991961597 23.29461313769445 31.27708715440527 24.972714715938682 50 19.863007494961845 23.39696125716097 30.003170074496747 26.736861173380433 51 18.72563005230623 23.2923487987682 28.07123610261984 29.910785046305733 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 406.0 1 598.5 2 791.0 3 1188.0 4 1585.0 5 1132.5 6 680.0 7 688.0 8 696.0 9 669.5 10 643.0 11 682.0 12 721.0 13 723.5 14 726.0 15 754.5 16 783.0 17 783.5 18 784.0 19 830.0 20 876.0 21 851.5 22 827.0 23 1107.5 24 1388.0 25 1479.5 26 2117.5 27 2664.0 28 3347.5 29 4031.0 30 4912.5 31 5794.0 32 6702.0 33 7610.0 34 8474.0 35 9338.0 36 10181.0 37 11024.0 38 12184.0 39 13344.0 40 15702.0 41 18060.0 42 20839.0 43 23618.0 44 35771.0 45 47924.0 46 47486.0 47 47048.0 48 47089.0 49 47130.0 50 41668.5 51 36207.0 52 32010.5 53 27814.0 54 25817.5 55 23821.0 56 22363.0 57 20905.0 58 20901.0 59 20897.0 60 20090.5 61 19284.0 62 17490.5 63 15697.0 64 13372.5 65 11048.0 66 8740.5 67 6433.0 68 5251.5 69 4070.0 70 3094.5 71 2119.0 72 1827.5 73 1536.0 74 1210.0 75 686.0 76 488.0 77 317.5 78 147.0 79 128.5 80 110.0 81 86.0 82 62.0 83 38.5 84 15.0 85 13.0 86 11.0 87 12.5 88 14.0 89 8.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 441630.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.435538143367808 #Duplication Level Percentage of deduplicated Percentage of total 1 70.54291493264758 22.17554493109594 2 11.855770452998481 7.453850485884937 3 4.380851745351291 4.131432964242898 4 2.183582906608998 2.7456841499965243 5 1.2607562460312405 1.9816275530802137 6 0.8452426159240608 1.5942393895968476 7 0.652521121910266 1.4358646832014326 8 0.5604760284504875 1.409509245663888 9 0.5145248330199163 1.4556928512696776 >10 7.0141615661750105 45.55928588082659 >50 0.12079535940971653 2.5231238810104593 >100 0.05966999681684792 3.176436827897664 >500 0.005093780216072383 1.0970899486243122 >1k 0.0036384144400517025 3.260617207608621 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGC 3923 0.8883001607680638 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 3505 0.7936507936507936 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCG 3410 0.7721395738514141 No Hit GCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 2179 0.49339945202997987 No Hit CCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 1237 0.28009872517718454 No Hit CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 927 0.2099042184634196 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTTAACAT 805 0.18227928356316375 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCT 693 0.15691868758915833 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 659 0.1492199352399067 No Hit TCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 586 0.1326902610782782 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTTAACATCGTA 578 0.1308787899372778 No Hit GAACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 548 0.12408577315852637 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTC 475 0.10755609899689784 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.5286778525009626E-4 0.0 0.0 0.2160179335642959 0.0 2 4.5286778525009626E-4 0.0 0.0 1.2503679550755158 0.0 3 4.5286778525009626E-4 0.0 0.0 1.7050472114666124 0.0 4 4.5286778525009626E-4 0.0 0.0 2.4026900346443854 0.0 5 4.5286778525009626E-4 0.0 0.0 4.785680320630392 0.0 6 4.5286778525009626E-4 0.0 0.0 5.707945565292213 0.0 7 4.5286778525009626E-4 0.0 0.0 6.7219165364671785 0.0 8 4.5286778525009626E-4 0.0 0.0 8.110635599936598 0.0 9 4.5286778525009626E-4 0.0 0.0 8.571881439213822 0.0 10 4.5286778525009626E-4 0.0 0.0 10.392409935919208 0.0 11 4.5286778525009626E-4 0.0 0.0 12.061001290673188 0.0 12 4.5286778525009626E-4 0.0 0.0 14.251296334035278 0.0 13 4.5286778525009626E-4 0.0 0.0 14.824400516269275 0.0 14 4.5286778525009626E-4 0.0 0.0 15.073477798156828 0.0 15 6.793016778751444E-4 0.0 0.0 15.650204922672826 0.0 16 6.793016778751444E-4 0.0 0.0 16.51744673142676 0.0 17 6.793016778751444E-4 0.0 0.0 17.510359350587596 0.0 18 6.793016778751444E-4 0.0 0.0 18.533161243574938 0.0 19 6.793016778751444E-4 0.0 0.0 19.38591128320087 0.0 20 6.793016778751444E-4 0.0 0.0 20.039399497316758 0.0 21 6.793016778751444E-4 0.0 0.0 20.86927971378756 0.0 22 6.793016778751444E-4 0.0 0.0 21.70980232321174 0.0 23 6.793016778751444E-4 0.0 0.0 22.507528926929783 0.0 24 6.793016778751444E-4 0.0 0.0 23.162375744401423 0.0 25 6.793016778751444E-4 0.0 0.0 23.747028055159298 0.0 26 6.793016778751444E-4 0.0 0.0 24.28594071960691 0.0 27 6.793016778751444E-4 0.0 0.0 24.839118719289903 0.0 28 9.057355705001925E-4 0.0 0.0 25.372823404207143 0.0 29 9.057355705001925E-4 0.0 0.0 25.921246292145007 0.0 30 9.057355705001925E-4 0.0 0.0 26.52197540927926 0.0 31 0.0011321694631252406 0.0 0.0 27.097117496546883 0.0 32 0.0011321694631252406 0.0 0.0 27.657088513008627 0.0 33 0.0011321694631252406 0.0 0.0 28.21660666168512 0.0 34 0.0011321694631252406 0.0 0.0 28.75302855331386 0.0 35 0.0011321694631252406 0.0 0.0 29.338586599642234 0.0 36 0.0013586033557502887 0.0 0.0 29.87749926408985 0.0 37 0.0013586033557502887 0.0 0.0 30.441546090618843 0.0 38 0.0013586033557502887 0.0 0.0 30.995176958087086 0.0 39 0.0013586033557502887 0.0 0.0 31.539750469850325 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGAT 30 2.1624546E-6 45.000004 7 GTTTCGA 20 7.028562E-4 45.000004 28 GACGTTG 20 7.028562E-4 45.000004 1 TACGGGT 20 7.028562E-4 45.000004 4 ATCCGGC 30 2.1624546E-6 45.000004 6 TGCGACG 20 7.028562E-4 45.000004 1 AACGATA 20 7.028562E-4 45.000004 1 GCGCTAG 20 7.028562E-4 45.000004 1 GCGTAAG 30 2.1624546E-6 45.000004 1 TGGTCGA 30 2.1624546E-6 45.000004 6 ACGACGG 30 2.1624546E-6 45.000004 27 TACGTAG 20 7.028562E-4 45.000004 1 GTAGCAC 25 3.886891E-5 45.0 9 TACTCGC 25 3.886891E-5 45.0 45 GGCGATT 100 0.0 45.0 8 TATACGG 35 1.2096643E-7 45.0 2 CGCCGGT 55 6.002665E-11 40.909092 28 CGATGAA 260 0.0 40.673077 19 CCGCTTA 50 1.0786607E-9 40.5 41 CGTTAGG 50 1.0786607E-9 40.5 2 >>END_MODULE