##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935967.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 606095 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03474042848068 33.0 31.0 34.0 30.0 34.0 2 32.15806432984928 33.0 31.0 34.0 30.0 34.0 3 32.21706333165593 34.0 31.0 34.0 30.0 34.0 4 35.77522005626181 37.0 35.0 37.0 35.0 37.0 5 35.81311345581138 37.0 35.0 37.0 35.0 37.0 6 35.84427523738028 37.0 35.0 37.0 35.0 37.0 7 36.033526097393974 37.0 35.0 37.0 35.0 37.0 8 35.70504458871959 37.0 35.0 37.0 35.0 37.0 9 37.4983443189599 39.0 37.0 39.0 35.0 39.0 10 37.1096626766431 39.0 37.0 39.0 33.0 39.0 11 37.095296941898546 39.0 37.0 39.0 34.0 39.0 12 37.13385690362072 39.0 37.0 39.0 34.0 39.0 13 37.170831305323425 39.0 37.0 39.0 34.0 39.0 14 38.41655681040101 40.0 38.0 41.0 34.0 41.0 15 38.50351347561026 40.0 38.0 41.0 34.0 41.0 16 38.62116664879268 40.0 38.0 41.0 34.0 41.0 17 38.56153573284716 40.0 38.0 41.0 34.0 41.0 18 38.53464885867727 40.0 38.0 41.0 34.0 41.0 19 38.505623705854696 40.0 38.0 41.0 34.0 41.0 20 38.30110131250051 40.0 37.0 41.0 34.0 41.0 21 38.35899487704073 40.0 37.0 41.0 34.0 41.0 22 38.366414505976785 40.0 37.0 41.0 34.0 41.0 23 38.328120179179834 40.0 37.0 41.0 34.0 41.0 24 38.27395705293725 40.0 37.0 41.0 34.0 41.0 25 38.237413276796545 40.0 37.0 41.0 34.0 41.0 26 38.06463013224 40.0 37.0 41.0 34.0 41.0 27 37.993774903274236 40.0 37.0 41.0 34.0 41.0 28 38.008092790734125 40.0 37.0 41.0 34.0 41.0 29 37.97854956731206 40.0 37.0 41.0 34.0 41.0 30 37.90689413375791 40.0 37.0 41.0 33.0 41.0 31 37.9356981991272 40.0 37.0 41.0 33.0 41.0 32 37.79456520842442 40.0 37.0 41.0 33.0 41.0 33 37.71606596325658 40.0 37.0 41.0 33.0 41.0 34 37.61882873146949 40.0 37.0 41.0 33.0 41.0 35 37.59115650186852 40.0 37.0 41.0 33.0 41.0 36 37.519176036759916 40.0 37.0 41.0 33.0 41.0 37 37.44410199721166 40.0 37.0 41.0 33.0 41.0 38 37.37983154455985 40.0 37.0 41.0 33.0 41.0 39 37.33617832188023 40.0 36.0 41.0 33.0 41.0 40 37.26174444600269 40.0 36.0 41.0 32.0 41.0 41 37.21815721957779 40.0 36.0 41.0 32.0 41.0 42 37.17764706852886 40.0 36.0 41.0 32.0 41.0 43 37.11822569069205 40.0 36.0 41.0 32.0 41.0 44 37.08725034854272 40.0 36.0 41.0 32.0 41.0 45 37.024096882501915 40.0 36.0 41.0 31.0 41.0 46 36.9881536722791 40.0 35.0 41.0 31.0 41.0 47 36.94492117572328 39.0 35.0 41.0 31.0 41.0 48 36.89787904536418 39.0 35.0 41.0 31.0 41.0 49 36.87068528860987 39.0 35.0 41.0 31.0 41.0 50 36.75327465166352 39.0 35.0 41.0 31.0 41.0 51 35.83691665497983 38.0 35.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 3.0 10 9.0 11 12.0 12 12.0 13 9.0 14 11.0 15 13.0 16 29.0 17 50.0 18 99.0 19 212.0 20 457.0 21 881.0 22 1437.0 23 1910.0 24 2603.0 25 3717.0 26 4773.0 27 5171.0 28 5608.0 29 6340.0 30 7548.0 31 9675.0 32 12698.0 33 17372.0 34 29189.0 35 39980.0 36 40302.0 37 60180.0 38 118391.0 39 237186.0 40 212.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.37224362517427 21.710127950238824 24.15776404689034 10.759864377696566 2 31.695691269520452 26.84810137024724 24.617427960963216 16.83877939926909 3 30.963462823484768 26.26304457222053 27.140959750534154 15.63253285376055 4 26.531319347627026 24.43775315750831 30.76728895635173 18.26363853851294 5 26.633613542431466 28.901079863717733 25.62898555506975 18.836321038781048 6 24.083518260338728 36.20472038211832 25.28531005865417 14.426451298888788 7 77.88185020500087 5.279370395730043 12.068900089919897 4.769879309349195 8 78.3931561883863 6.96936948828154 9.488446530659385 5.149027792672766 9 72.64356247782938 6.846451463879425 10.993491119378977 9.516494938912217 10 36.786972339319746 29.061120781395655 19.32205347346538 14.829853405819222 11 27.044770209290625 24.69645847598149 28.324107606893307 19.93466370783458 12 23.699585048548492 21.686699279815873 32.73414233742235 21.879573334213283 13 22.578308680982353 23.921167473745868 35.020087610028135 18.48043623524365 14 19.495293642085812 28.758197972265076 30.96973246768246 20.776775917966656 15 18.039251272490286 26.564152484346515 36.26461198326995 19.13198425989325 16 20.432605449640732 26.292247914930826 31.356140539024413 21.91900609640403 17 20.733053399219596 27.195571651308786 29.7202583753372 22.35111657413442 18 20.92873229444229 26.779960237256535 30.963627814121548 21.327679654179626 19 21.101147509878814 28.748463524694973 29.32345589387802 20.82693307154819 20 22.491688596672137 27.702587878137912 30.990851269190472 18.81487225599947 21 21.035811217713395 29.07349507915426 31.005865417137578 18.88482828599477 22 19.81224065534281 25.13516857918313 30.68066887204151 24.371921893432546 23 19.79029690065089 27.865763617914684 30.52772255174519 21.81621692968924 24 21.155264438743103 26.052186538413945 29.960484742490863 22.83206428035209 25 18.85941972793044 30.69733292635643 27.945619086116864 22.497628259596265 26 18.828731469489107 28.887550631501664 30.103531624580306 22.180186274428927 27 21.442513137379454 28.523086314851632 28.975160659632564 21.05923988813635 28 17.687161253598855 28.910979301924616 31.898134780851183 21.50372466362534 29 19.969146750921883 27.722881726462024 30.0593141339229 22.24865738869319 30 20.324866563822503 30.206815763205437 28.910979301924616 20.557338371047443 31 20.389377902804014 28.717775266253643 27.522583093409448 23.370263737532895 32 22.143888334337024 31.102549930291456 26.360884019831875 20.39267771553964 33 20.939291695196296 30.132404986017043 26.07726511520471 22.851038203581947 34 19.185606216847194 29.218026876974733 27.80735693249408 23.789009973683996 35 20.205083361519232 30.715151915128818 26.083534759402404 22.996229963949546 36 20.593966292412905 32.47741690659055 26.741352428249698 20.187264372746846 37 20.613600178189888 29.2767635436689 29.33880002309869 20.77083625504253 38 20.60271079616232 29.60196008876496 27.08172811192965 22.713601003143072 39 23.633423803199168 26.67453122035324 26.91607751260116 22.775967463846428 40 20.164825646144582 28.67768254151577 28.448345556389675 22.709146255949975 41 19.29037527120336 29.179254077331112 26.488916753974213 25.041453897491316 42 21.124246199028203 28.822709311246587 29.059965846938184 20.993078642787022 43 23.07295061005288 26.684265667923345 28.645674357980184 21.59710936404359 44 20.92972223826298 26.802728945132365 28.59172241975268 23.675826396851978 45 20.71094465389089 25.327877642943765 27.99049653932139 25.97068116384395 46 22.614936602347814 28.317507981422054 26.635593430072845 22.431961986157287 47 19.218274362929904 27.32591425436606 31.032428909659377 22.423382473044654 48 20.370238988937377 26.854536005081712 28.772057185754708 24.003167820226203 49 20.851681667065396 24.88438281127546 31.495557627104663 22.768377894554483 50 20.099819335252725 24.492860030193285 30.275616858743266 25.13170377581072 51 19.80580602050834 24.20049662181671 27.865928608551467 28.12776874912349 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 165.0 1 334.0 2 503.0 3 2316.0 4 4129.0 5 2817.0 6 1505.0 7 1493.0 8 1481.0 9 1437.0 10 1393.0 11 1398.0 12 1403.0 13 1451.0 14 1499.0 15 1468.5 16 1438.0 17 1525.5 18 1613.0 19 1610.5 20 1608.0 21 1948.0 22 2288.0 23 2663.0 24 3038.0 25 3399.0 26 4700.0 27 5640.0 28 6736.5 29 7833.0 30 9227.5 31 10622.0 32 12601.0 33 14580.0 34 16070.0 35 17560.0 36 18909.0 37 20258.0 38 23298.0 39 26338.0 40 29637.0 41 32936.0 42 37489.0 43 42042.0 44 57965.0 45 73888.0 46 73079.5 47 72271.0 48 70596.0 49 68921.0 50 58163.5 51 47406.0 52 41256.0 53 35106.0 54 30769.5 55 26433.0 56 23123.0 57 19813.0 58 18916.0 59 18019.0 60 16056.0 61 14093.0 62 12523.5 63 10954.0 64 8763.5 65 6573.0 66 5216.5 67 3860.0 68 2817.5 69 1775.0 70 1587.0 71 1399.0 72 1070.0 73 741.0 74 695.0 75 494.5 76 340.0 77 241.0 78 142.0 79 98.5 80 55.0 81 33.5 82 12.0 83 8.0 84 4.0 85 3.5 86 3.0 87 4.0 88 5.0 89 2.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 606095.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.32923115255369 #Duplication Level Percentage of deduplicated Percentage of total 1 73.12974719510329 28.030069843689287 2 11.105173909112853 8.513055555033896 3 4.01563499296229 4.617486056086047 4 2.093494744028288 3.2096817584206585 5 1.3828043276318172 2.6500913356275753 6 0.9933352648545024 2.284426618715482 7 0.7860574702873572 2.1090284934485 8 0.6486135537049482 1.9888687062909007 9 0.5881900627525455 2.029038558918964 >10 5.153191718584597 36.16714097453355 >50 0.06338279123039002 1.701920744785128 >100 0.03386203914280403 2.322086819457299 >500 0.0034730296556722087 1.0040467121895624 >1k 0.0030389009487131824 3.373057822803218 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTC 4752 0.7840355059850355 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGC 4487 0.7403129872379742 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCG 3869 0.6383487737070921 No Hit GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 2366 0.39036784662470403 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2276 0.37551868931438137 No Hit CTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGCT 1285 0.21201296826405103 No Hit CCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 1236 0.20392842706176426 No Hit CGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTG 998 0.16466065550779993 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAATGACAGT 945 0.15591615175838772 No Hit GAACTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCT 903 0.14898654501357048 No Hit GAATGACTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCT 877 0.14469678845725506 No Hit TCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 627 0.10344912926191438 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTC 618 0.10196421353088213 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.22471724729621595 0.0 2 0.0 0.0 0.0 1.038121086628334 0.0 3 0.0 0.0 0.0 1.5482721355563072 0.0 4 0.0 0.0 0.0 2.311518821306891 0.0 5 0.0 0.0 0.0 4.698108382349302 0.0 6 0.0 0.0 0.0 5.860962390384346 0.0 7 0.0 0.0 0.0 6.978443973304515 0.0 8 0.0 0.0 0.0 8.679497438520364 0.0 9 0.0 0.0 0.0 9.29656242008266 0.0 10 0.0 0.0 0.0 11.310603123272754 0.0 11 0.0 0.0 0.0 13.171532515529744 0.0 12 0.0 0.0 0.0 15.4134252881149 0.0 13 0.0 0.0 0.0 16.11348055997822 0.0 14 0.0 0.0 0.0 16.437357179980037 0.0 15 0.0 0.0 0.0 16.95839761093558 0.0 16 0.0 0.0 0.0 17.903463978419225 0.0 17 0.0 0.0 0.0 19.092551497702505 0.0 18 0.0 0.0 0.0 20.336910880307542 0.0 19 0.0 0.0 0.0 21.318935150430214 0.0 20 0.0 0.0 0.0 22.100330806226747 0.0 21 0.0 0.0 0.0 23.056946518285088 0.0 22 0.0 0.0 0.0 24.059594618005427 0.0 23 0.0 0.0 0.0 25.102170451826858 0.0 24 0.0 0.0 0.0 25.873006706869386 0.0 25 0.0 0.0 0.0 26.562007606068356 0.0 26 0.0 0.0 0.0 27.211080771166237 0.0 27 0.0 0.0 0.0 27.875663056121564 0.0 28 0.0 0.0 0.0 28.542885191265395 0.0 29 0.0 0.0 0.0 29.246240275864345 0.0 30 0.0 0.0 0.0 29.99018305711151 0.0 31 0.0 0.0 0.0 30.699147823361024 0.0 32 0.0 0.0 0.0 31.3836939753669 0.0 33 0.0 0.0 0.0 32.032602149827994 0.0 34 0.0 0.0 0.0 32.66138146660177 0.0 35 0.0 0.0 0.0 33.31309448188815 0.0 36 0.0 0.0 0.0 33.958867834250405 0.0 37 0.0 0.0 0.0 34.62971976340343 0.0 38 0.0 0.0 0.0 35.266418630742706 0.0 39 0.0 0.0 0.0 35.88810335013488 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAAGG 75 0.0 45.000004 2 TTAGGCG 20 7.030645E-4 45.0 1 CGGTTCG 20 7.030645E-4 45.0 29 CGATTAG 20 7.030645E-4 45.0 10 AAGCGCG 25 3.888616E-5 45.0 1 TGTTGCG 35 1.2106648E-7 45.0 1 AACGAGC 25 3.888616E-5 45.0 15 CGGGACG 50 2.1827873E-11 45.0 6 AGCGACT 25 3.888616E-5 45.0 19 ACGTCGC 20 7.030645E-4 45.0 11 ACGTAAG 25 3.888616E-5 45.0 1 GATTCGC 20 7.030645E-4 45.0 10 TTCGAAG 20 7.030645E-4 45.0 1 AGTACCG 20 7.030645E-4 45.0 2 TACGTCT 20 7.030645E-4 45.0 20 TGCGTAG 35 1.2106648E-7 45.0 1 CGGCGAA 120 0.0 43.124996 31 CGTTTTT 1585 0.0 41.16719 1 TTGCGCG 55 6.002665E-11 40.909092 1 CGGGAAC 140 0.0 40.17857 6 >>END_MODULE