##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935964.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 444985 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.603348427475083 31.0 31.0 34.0 30.0 34.0 2 31.76366169646168 31.0 31.0 34.0 30.0 34.0 3 31.77877456543479 31.0 31.0 34.0 30.0 34.0 4 35.38372978864456 37.0 35.0 37.0 33.0 37.0 5 35.4301268582087 37.0 35.0 37.0 33.0 37.0 6 35.4652426486286 37.0 35.0 37.0 33.0 37.0 7 35.29798757261481 37.0 35.0 37.0 32.0 37.0 8 34.24392058159264 36.0 35.0 37.0 29.0 37.0 9 36.3190489567064 39.0 35.0 39.0 32.0 39.0 10 36.74202501207906 39.0 35.0 39.0 32.0 39.0 11 36.96224591840174 39.0 37.0 39.0 33.0 39.0 12 36.791950290459226 39.0 35.0 39.0 32.0 39.0 13 36.753526523365956 39.0 35.0 39.0 32.0 39.0 14 37.89991123296291 40.0 37.0 41.0 32.0 41.0 15 37.93078643100329 40.0 37.0 41.0 33.0 41.0 16 38.17227097542614 40.0 37.0 41.0 33.0 41.0 17 37.65134555097363 39.0 36.0 41.0 32.0 41.0 18 37.41483645516141 39.0 36.0 40.0 33.0 41.0 19 36.76789329977415 38.0 35.0 40.0 32.0 41.0 20 36.464492061530166 38.0 35.0 40.0 31.0 41.0 21 36.70677213838669 38.0 35.0 40.0 31.0 41.0 22 36.55921435554007 38.0 35.0 40.0 31.0 41.0 23 36.35411980179107 38.0 35.0 40.0 31.0 41.0 24 36.16538759733474 38.0 35.0 40.0 30.0 41.0 25 36.40397766216839 38.0 35.0 40.0 31.0 41.0 26 36.093457082823015 38.0 35.0 40.0 31.0 41.0 27 35.78265559513242 37.0 35.0 40.0 30.0 41.0 28 35.58389608638493 37.0 35.0 40.0 29.0 41.0 29 35.55423441239592 37.0 35.0 40.0 29.0 41.0 30 35.437327100913514 37.0 35.0 40.0 28.0 41.0 31 35.58508713776869 37.0 35.0 40.0 29.0 41.0 32 35.17698798835916 37.0 35.0 40.0 26.0 41.0 33 34.7891457015405 37.0 34.0 40.0 24.0 41.0 34 34.926536849556726 37.0 34.0 40.0 25.0 41.0 35 34.79759317729811 37.0 34.0 40.0 24.0 41.0 36 34.61070822611998 37.0 34.0 40.0 23.0 41.0 37 34.67493511017225 37.0 34.0 40.0 24.0 41.0 38 34.349596053799566 37.0 33.0 40.0 22.0 41.0 39 34.02249064575211 37.0 33.0 40.0 21.0 41.0 40 33.88565681989281 36.0 33.0 40.0 21.0 41.0 41 33.859599761789724 36.0 33.0 40.0 21.0 41.0 42 33.88890861489713 37.0 33.0 40.0 20.0 41.0 43 33.78417250019663 36.0 33.0 40.0 18.0 41.0 44 33.87844758812095 37.0 33.0 40.0 20.0 41.0 45 33.7596660561592 36.0 33.0 40.0 20.0 41.0 46 33.574118228704336 36.0 33.0 40.0 20.0 41.0 47 33.27918693888558 36.0 33.0 40.0 18.0 41.0 48 33.28896704383294 36.0 33.0 40.0 18.0 41.0 49 33.35034664089801 36.0 33.0 40.0 18.0 41.0 50 33.165881996022335 36.0 33.0 40.0 15.0 41.0 51 32.091883996089756 35.0 31.0 39.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 12.0 10 26.0 11 39.0 12 40.0 13 60.0 14 44.0 15 64.0 16 86.0 17 133.0 18 288.0 19 565.0 20 1182.0 21 2096.0 22 3294.0 23 4513.0 24 5743.0 25 6968.0 26 8336.0 27 9264.0 28 9746.0 29 10563.0 30 11980.0 31 13929.0 32 17507.0 33 21956.0 34 30965.0 35 53973.0 36 41515.0 37 37344.0 38 59496.0 39 93196.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.22707506994618 21.117116307291255 9.395822331089812 26.259986291672753 2 34.027888580513945 47.702506826072785 9.608638493432363 8.660966099980898 3 12.797510028427924 48.03330449340989 28.21915345461083 10.950032023551355 4 12.301538254098453 23.082800543838555 51.3334157331146 13.282245468948393 5 30.709349753362474 24.052720878231852 29.482117374742966 15.755811993662707 6 15.511758823331123 41.39308066564041 32.38401294425655 10.711147566771913 7 36.99495488611976 14.716675843005945 39.81190377203726 8.47646549883704 8 32.37794532399968 29.109969998988728 27.248783666865172 11.26330101014641 9 28.957155859186262 15.543894738024877 25.950987111925123 29.547962290863737 10 28.559839095699857 23.077407103610234 31.416115149948876 16.946638650741036 11 24.38374327224513 24.117217434295537 34.47172376596964 17.02731552748969 12 13.433935975369957 24.19295032416823 37.25496365046013 25.118150050001688 13 21.42566603368653 27.574187893973956 40.01370832724699 10.98643774509253 14 9.88280503837208 44.28711080148769 31.760621144532962 14.069463015607267 15 8.181624099688753 31.2464465094329 36.97090913176849 23.60102025910986 16 8.842320527658236 35.90233378653213 26.08290167084284 29.172444014966796 17 9.445936379877972 40.57687337775431 26.768767486544494 23.20842275582323 18 10.130229108846365 35.187028776250884 26.129869546164475 28.552872568738273 19 10.853624279470095 34.26160432374125 29.843028416688206 25.04174298010045 20 18.160836882142096 32.52986055709743 31.6630897670708 17.646212793689674 21 11.866017955661427 39.9582008382305 31.996134701169705 16.17964650493837 22 12.700203377641945 32.06737305751879 34.29216715170174 20.94025641313752 23 16.548872433902268 31.608481184759036 36.27942514916233 15.563221232176366 24 22.33805633897772 31.249592682899426 25.00870815870198 21.403642819420877 25 16.128633549445485 41.827702057372726 23.01695562771779 19.026708765464004 26 16.88259154802971 28.61175095789746 30.48687034394418 24.018787150128656 27 21.037113610571144 34.409249749991574 22.211310493612142 22.34232614582514 28 16.36998999966291 32.65413440902502 24.643077856556964 26.332797734755104 29 22.755149049967976 31.42869984381496 23.758104205759743 22.058046900457317 30 22.489072665370742 32.10759913255503 22.635594458240167 22.76773374383406 31 16.098969628189714 28.529051541063183 21.130150454509703 34.2418283762374 32 19.46177961054867 32.90133375282313 22.36749553355731 25.269391103070888 33 13.755295122307492 34.54004067552839 24.775441868827038 26.929222333337076 34 11.5253323145724 28.75422767059564 31.600166297740373 28.12027371709159 35 13.355506365383102 27.087654640044047 36.36684382619639 23.189995168376463 36 11.45184669146151 32.152095014438686 34.927694191939054 21.46836410216075 37 15.69333797768464 25.229614481387014 33.55528838050721 25.521759160421137 38 15.968852882681439 27.624751396114476 29.91269368630403 26.493702034900053 39 19.39728305448498 29.845949863478545 29.593357079452115 21.163410002584357 40 14.369248401631515 33.63394271717024 35.46411676798094 16.532692113217298 41 14.79802689978314 32.741777812735265 32.05883344382395 20.40136184365765 42 18.065103318089374 26.057282829758304 37.30058316572469 18.57703068642763 43 21.421845680191467 26.260660471701293 27.86475948627482 24.45273436183242 44 19.364023506410327 27.336427070575414 27.09080081351057 26.20874860950369 45 18.244659932357273 22.67492162657168 30.974077777902625 28.10634066316842 46 22.41626122228839 26.21369259637965 28.61377349798308 22.756272683348875 47 13.852826499769655 24.466217962403228 38.16038742878973 23.52056810903738 48 15.789071541737362 24.69049518523096 35.55737833859568 23.96305493443599 49 15.122082766834838 21.65870759688529 40.51237682169062 22.706832814589255 50 14.206546288077126 21.185208490173828 38.119936627077315 26.48830859467173 51 17.752283784846682 21.968605683337643 33.048304999044916 27.23080553277077 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 33715.0 1 21600.5 2 9486.0 3 19461.0 4 29436.0 5 17113.5 6 4791.0 7 4143.0 8 3495.0 9 3472.5 10 3450.0 11 3342.5 12 3235.0 13 2898.5 14 2562.0 15 2295.5 16 2029.0 17 1785.0 18 1541.0 19 1400.5 20 1260.0 21 1172.5 22 1085.0 23 975.0 24 865.0 25 942.5 26 1276.0 27 1532.0 28 1494.5 29 1457.0 30 1790.5 31 2124.0 32 2389.0 33 2654.0 34 3304.0 35 3954.0 36 4399.5 37 4845.0 38 5303.0 39 5761.0 40 6597.0 41 7433.0 42 9808.5 43 12184.0 44 16673.0 45 21162.0 46 57397.5 47 93633.0 48 73383.0 49 53133.0 50 51534.0 51 49935.0 52 35954.0 53 21973.0 54 19195.5 55 16418.0 56 14805.0 57 13192.0 58 11440.5 59 9689.0 60 8744.5 61 7800.0 62 6878.5 63 5957.0 64 5161.0 65 4365.0 66 3528.5 67 2692.0 68 2334.5 69 1977.0 70 1580.5 71 1184.0 72 992.0 73 800.0 74 659.5 75 414.0 76 309.0 77 242.0 78 175.0 79 128.5 80 82.0 81 52.5 82 23.0 83 23.5 84 24.0 85 16.0 86 8.0 87 11.5 88 15.0 89 7.5 90 0.0 91 2.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 444985.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.687942275764232 #Duplication Level Percentage of deduplicated Percentage of total 1 78.42806043602063 22.499396705887083 2 9.356594045286172 5.368428597378581 3 3.7521540605593993 3.2292473729730724 4 2.0067196030621304 2.3027462454516363 5 1.3129882783698152 1.8833465969314158 6 0.8905885474769597 1.5329491704885443 7 0.6427475526285094 1.2907373281386787 8 0.5291504995409784 1.2144191188818718 9 0.37457905812930326 0.9671312157591228 >10 2.5345067949050364 12.8002237881611 >50 0.07649256435798395 1.5028344331034968 >100 0.07018389925629455 4.235898227522186 >500 0.005520081963978223 1.2607701784864953 >1k 0.011828747065667621 7.442231573958413 >5k 0.003942915688555874 7.933599388003393 >10k+ 0.003942915688555874 24.5360400588749 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 31470 7.0721484993876205 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23871 5.364450487095071 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTC 23765 5.340629459419981 No Hit CGCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCTG 15658 3.5187702956279425 No Hit CGTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCT 13693 3.077182376934054 No Hit GAACTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCT 8567 1.925233434834882 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCG 7960 1.788824342393564 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGC 7691 1.728372866501118 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTT 5817 1.3072350753396182 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTT 5034 1.1312740878906031 No Hit GCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCTGC 4098 0.9209299189860333 TruSeq Adapter, Index 13 (95% over 22bp) CGTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTC 4016 0.9025023315392653 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCT 3835 0.861826803150668 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTC 2842 0.6386732137038327 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCT 2725 0.6123801925907615 No Hit AAAACTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTC 2196 0.4934997808914907 No Hit CCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCTGC 2133 0.47934200029214463 TruSeq Adapter, Index 13 (95% over 22bp) GAATGATACGGCGACCACTGAATCTGTCTCTTATACACATCTGACGCAGCC 2025 0.4550715192646943 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCCACTTT 1539 0.3458543546411677 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTC 1502 0.3375394676225041 No Hit CTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCTGCT 1473 0.3310223940132813 TruSeq Adapter, Index 16 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCC 1213 0.27259345820645636 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGT 1147 0.2577614975785701 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCG 1078 0.24225535692214342 No Hit AAAAACTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTT 1075 0.24158117689360314 No Hit GAATGATACGGCGACCCTGTCTCTTATACACATCTGACGCAGCCACTTTCG 937 0.21056889558074993 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCCACTTTCGTA 906 0.20360236861916695 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 863 0.1939391215434228 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGCCACTTTCGT 860 0.19326494151488252 No Hit GAATGATACGGCGACCACTGAATGATACGGCGACCACTGAATGATACGGCG 761 0.17101700057305302 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGC 703 0.15798285335460746 No Hit AAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 543 0.12202658516579212 No Hit GAATGATACGGCGACCACTGAATGATACCTGTCTCTTATACACATCTGACG 488 0.10966661797588682 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCAGCCACTTTCGTAT 471 0.1058462644808252 No Hit AAACTGTCTCTTATACACATCTGACGCAGCCACTTTCGTATGCCGTCTTCT 447 0.10045282425250289 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.494533523601919E-4 0.0 0.0 0.34607908131734777 0.0 2 4.494533523601919E-4 0.0 0.0 1.927255974920503 0.0 3 4.494533523601919E-4 0.0 0.0 5.858399721338921 0.0 4 4.494533523601919E-4 0.0 0.0 11.40555299616841 0.0 5 4.494533523601919E-4 0.0 0.0 19.1125543557648 0.0 6 4.494533523601919E-4 0.0 0.0 22.5708731755003 0.0 7 4.494533523601919E-4 0.0 0.0 24.751171387799587 0.0 8 4.494533523601919E-4 0.0 0.0 26.52988302976505 0.0 9 4.494533523601919E-4 0.0 0.0 27.202265244895894 0.0 10 8.989067047203838E-4 0.0 0.0 29.95606593480679 0.0 11 8.989067047203838E-4 0.0 0.0 30.881490387316425 0.0 12 8.989067047203838E-4 0.0 0.0 33.55843455397373 0.0 13 8.989067047203838E-4 0.0 0.0 34.200253941144084 0.0 14 0.0011236333809004797 0.0 0.0 34.558917716327514 0.0 15 0.0011236333809004797 0.0 0.0 35.04432733687652 0.0 16 0.0011236333809004797 0.0 0.0 35.568165219052325 0.0 17 0.0011236333809004797 0.0 0.0 36.1081834219131 0.0 18 0.0013483600570805758 0.0 0.0 36.541905906940684 0.0 19 0.0015730867332606718 0.0 0.0 37.21541175545243 0.0 20 0.0015730867332606718 0.0 0.0 37.56418755688394 0.0 21 0.0015730867332606718 0.0 0.0 37.86891692978415 0.0 22 0.0015730867332606718 0.0 0.0 38.1776913828556 0.0 23 0.0015730867332606718 0.0 0.0 38.62040293493039 0.0 24 0.0015730867332606718 0.0 0.0 39.67077541939616 0.0 25 0.0015730867332606718 0.0 0.0 40.042473341798036 0.0 26 0.0015730867332606718 0.0 0.0 40.34562962796499 0.0 27 0.0015730867332606718 0.0 0.0 40.82025236805735 0.0 28 0.0017978134094407676 0.0 0.0 41.115992673910355 0.0 29 0.0017978134094407676 0.0 0.0 41.52679303796757 0.0 30 0.0017978134094407676 0.0 0.0 41.78904906906974 0.0 31 0.0017978134094407676 0.0 0.0 42.10636313583604 0.0 32 0.0017978134094407676 0.0 0.0 42.37670932728069 0.0 33 0.0020225400856208635 0.0 0.0 42.60211018348933 0.0 34 0.0020225400856208635 0.0 0.0 42.892906502466374 0.0 35 0.0020225400856208635 0.0 0.0 43.14190365967392 0.0 36 0.0020225400856208635 0.0 0.0 43.36550670247312 0.0 37 0.0020225400856208635 0.0 0.0 43.592705372091196 0.0 38 0.0020225400856208635 0.0 0.0 43.87069227052597 0.0 39 0.0020225400856208635 0.0 0.0 44.17991617694978 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAAAGGG 60 0.0 45.000004 3 CGGGATA 30 2.162491E-6 45.000004 6 GACATAG 25 3.886938E-5 45.000004 1 TAAGGGC 30 2.162491E-6 45.000004 4 CACCGGT 25 3.886938E-5 45.000004 16 GGCTATC 30 2.162491E-6 45.000004 32 CCTCGTA 20 7.028622E-4 45.0 40 CGCCTAC 20 7.028622E-4 45.0 31 TCAAGCG 20 7.028622E-4 45.0 17 TATCCCC 20 7.028622E-4 45.0 35 ACGAGGG 65 0.0 44.999996 3 CGTTTTT 4830 0.0 44.347824 1 CGTCTGT 1570 0.0 44.28344 1 CGTTCTG 455 0.0 43.021976 1 CGTTTCT 640 0.0 42.890625 1 TGATCCG 85 0.0 42.35294 4 CGTTTTC 490 0.0 42.2449 1 ACCCGCT 70 0.0 41.785713 34 CGATGAA 720 0.0 41.562504 19 CCGATGA 705 0.0 41.489365 18 >>END_MODULE