##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935959.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 351347 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06088852331171 33.0 31.0 34.0 30.0 34.0 2 32.17272383142591 33.0 31.0 34.0 30.0 34.0 3 32.23055270146038 34.0 31.0 34.0 30.0 34.0 4 35.80249724631205 37.0 35.0 37.0 35.0 37.0 5 35.82602384537224 37.0 35.0 37.0 35.0 37.0 6 35.85672284095211 37.0 35.0 37.0 35.0 37.0 7 36.026432558126295 37.0 35.0 37.0 35.0 37.0 8 35.70247931532075 37.0 35.0 37.0 35.0 37.0 9 37.40639880232363 39.0 37.0 39.0 34.0 39.0 10 37.18986358215667 39.0 37.0 39.0 34.0 39.0 11 37.184376129581295 39.0 37.0 39.0 34.0 39.0 12 37.106959786194274 39.0 37.0 39.0 34.0 39.0 13 37.05674447198923 39.0 37.0 39.0 33.0 39.0 14 38.20365052213339 40.0 37.0 41.0 33.0 41.0 15 38.343108095415644 40.0 37.0 41.0 34.0 41.0 16 38.4373254930311 40.0 38.0 41.0 34.0 41.0 17 38.43154203678984 40.0 38.0 41.0 34.0 41.0 18 38.42180237770637 40.0 37.0 41.0 34.0 41.0 19 38.435575086737614 40.0 37.0 41.0 34.0 41.0 20 38.31096038958636 40.0 37.0 41.0 34.0 41.0 21 38.296362285717535 40.0 37.0 41.0 34.0 41.0 22 38.287778179406686 40.0 37.0 41.0 34.0 41.0 23 38.330234782138454 40.0 37.0 41.0 34.0 41.0 24 38.240992523061244 40.0 37.0 41.0 34.0 41.0 25 38.1705778048482 40.0 37.0 41.0 34.0 41.0 26 38.02278658989546 40.0 37.0 41.0 34.0 41.0 27 37.98780977210564 40.0 36.0 41.0 34.0 41.0 28 38.00912203604983 40.0 36.0 41.0 34.0 41.0 29 37.962649460504856 40.0 36.0 41.0 34.0 41.0 30 37.86119420402053 40.0 36.0 41.0 34.0 41.0 31 37.904242814084085 40.0 36.0 41.0 34.0 41.0 32 37.833583323608856 40.0 36.0 41.0 34.0 41.0 33 37.82310934773884 40.0 36.0 41.0 34.0 41.0 34 37.78646750932838 40.0 36.0 41.0 33.0 41.0 35 37.799861675209975 40.0 36.0 41.0 33.0 41.0 36 37.76757735230413 40.0 36.0 41.0 33.0 41.0 37 37.73018981235075 40.0 36.0 41.0 33.0 41.0 38 37.66277782363305 40.0 36.0 41.0 33.0 41.0 39 37.61199042541988 40.0 36.0 41.0 33.0 41.0 40 37.536856725687144 40.0 36.0 41.0 33.0 41.0 41 37.484617771035474 40.0 36.0 41.0 33.0 41.0 42 37.48935952206793 40.0 35.0 41.0 33.0 41.0 43 37.43904459124455 40.0 35.0 41.0 33.0 41.0 44 37.33801626312449 39.0 35.0 41.0 33.0 41.0 45 37.23827441247541 39.0 35.0 41.0 33.0 41.0 46 37.20810765425633 39.0 35.0 41.0 33.0 41.0 47 37.199426777516244 39.0 35.0 41.0 33.0 41.0 48 37.1646975781777 39.0 35.0 41.0 33.0 41.0 49 37.14709389862443 39.0 35.0 41.0 33.0 41.0 50 37.04050696320162 39.0 35.0 41.0 32.0 41.0 51 36.142693690283394 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 6.0 9 13.0 10 8.0 11 13.0 12 11.0 13 11.0 14 9.0 15 17.0 16 21.0 17 19.0 18 59.0 19 100.0 20 197.0 21 268.0 22 403.0 23 553.0 24 959.0 25 1355.0 26 1815.0 27 2258.0 28 2718.0 29 3383.0 30 4308.0 31 5566.0 32 7628.0 33 10654.0 34 20771.0 35 28053.0 36 23609.0 37 35425.0 38 68072.0 39 132934.0 40 128.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.692267188847495 22.09382746970943 23.94982737863138 11.264077962811694 2 33.31720492846104 24.674467122246668 22.88022951668863 19.128098432603664 3 32.75109791744344 24.46897226957965 24.78262230786089 17.997307505116027 4 30.65943355144629 25.192473537556886 24.684144165170046 19.463948745826777 5 26.170708729546572 28.922404346699988 24.704636726654847 20.202250197098596 6 27.078073813067995 33.385798085653214 23.91111920693787 15.625008894340922 7 77.724870284932 6.652682390912687 9.66537354808779 5.957073776067534 8 75.90103231278479 6.307724272585221 10.294665957016852 7.49657745761313 9 68.51687932442856 9.229052759807256 13.45792051732333 8.796147398440858 10 38.55874676601764 26.110654139639728 19.98764753932722 15.342951555015413 11 29.229508150062472 25.110503291617686 26.05486883337555 19.605119724944288 12 28.32185844763154 22.192020993490765 30.237343708641312 19.248776850236375 13 24.82076124173538 24.80112253697911 30.770434926155627 19.607681295129886 14 19.158837274830866 29.219831107139093 28.954850902384255 22.666480715645786 15 17.989907413468735 27.93022282814426 34.70671444469428 19.37315531369273 16 20.39607567447566 26.996957423857324 31.064161640771086 21.54280526089592 17 20.01696328700686 26.63947607351137 28.000239079883986 25.343321559597776 18 21.199270237116014 27.34561558800844 29.737268284630293 21.717845890245254 19 22.292491468548185 28.75647152245501 27.391154613530215 21.55988239546659 20 24.388140499278492 27.33394621271848 28.590538698210032 19.687374589793 21 22.97557685137485 27.425308882671544 29.201615496930383 20.39749876902322 22 19.59857349002553 26.245278883838484 28.391305461552253 25.76484216458373 23 19.80179139141646 26.001645097296972 30.155942700521138 24.040620810765425 24 23.022538971444185 24.662513128047202 29.37437917500363 22.940568725504985 25 20.666179019601707 27.534602543923814 26.840132404716705 24.959086031757778 26 19.063489940144642 29.306924493449493 27.848252582205056 23.781332984200805 27 21.333041124586234 27.73127421039599 29.31062453927314 21.625060125744632 28 19.1673758421162 27.6752042852223 29.37836383973678 23.779056032924714 29 19.522011003367044 27.55907977014177 29.921701337993493 22.997207888497694 30 22.527586687804366 26.250402024209684 28.856088140783896 22.365923147202054 31 23.635323483621605 26.926371934298572 26.262071399499643 23.176233182580184 32 23.109063119935563 26.343472407619817 29.086344838578388 21.461119633866236 33 24.568873506818043 24.577412074103382 28.58427708220079 22.269437336877786 34 20.608401380970946 25.19475048883298 29.768860983586027 24.427987146610047 35 19.6387047562666 25.48933106017698 31.081808013160778 23.790156170395647 36 21.92447921855032 26.085323056693237 31.6203069899558 20.369890734800638 37 21.787292904165966 25.516369856580535 31.83348655317962 20.86285068607388 38 21.402488138506946 25.67518720808773 30.09958815643794 22.822736496967387 39 23.09027827190783 23.10137840937876 30.3036599145574 23.504683404156005 40 22.307007032933253 23.864157086868538 30.444261655855893 23.384574224342316 41 18.665308085738598 25.19418125101395 30.331837186599003 25.80867347664844 42 20.04969446160064 24.702075156469245 31.988603858863172 23.259626523066938 43 23.47963694011903 22.033488260893076 32.21146046501037 22.27541433397752 44 21.848201350801343 23.73465548304098 28.75163300099332 25.665510165164353 45 22.090981280614322 22.92946858803405 28.15706409902461 26.822486032327014 46 23.201279646617163 24.324955101367024 28.937773767813585 23.535991484202228 47 19.22942276438962 23.271580517266408 33.96300523414175 23.535991484202228 48 20.073317831090062 21.985103046276187 33.13106416164077 24.81051496099298 49 21.458273444771123 20.324920947097883 34.51915058332646 23.697655024804536 50 19.966585740023397 20.69378705382428 32.96570057521482 26.373926630937504 51 18.998881447685623 20.661055879230506 29.636797809572872 30.703264863511002 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 180.0 1 354.0 2 528.0 3 819.5 4 1111.0 5 825.0 6 539.0 7 503.0 8 467.0 9 488.5 10 510.0 11 537.5 12 565.0 13 553.5 14 542.0 15 554.5 16 567.0 17 594.0 18 621.0 19 652.0 20 683.0 21 1029.0 22 1375.0 23 1356.5 24 1338.0 25 1819.0 26 2536.0 27 2772.0 28 3521.0 29 4270.0 30 4758.0 31 5246.0 32 6083.5 33 6921.0 34 7362.5 35 7804.0 36 8640.5 37 9477.0 38 10109.5 39 10742.0 40 13836.0 41 16930.0 42 20212.5 43 23495.0 44 29088.5 45 34682.0 46 39651.5 47 44621.0 48 43773.0 49 42925.0 50 36513.5 51 30102.0 52 25280.5 53 20459.0 54 18631.5 55 16804.0 56 15041.0 57 13278.0 58 12793.0 59 12308.0 60 12026.5 61 11745.0 62 10428.0 63 9111.0 64 7661.0 65 6211.0 66 5105.0 67 3999.0 68 3206.5 69 2414.0 70 1967.5 71 1521.0 72 1234.0 73 947.0 74 801.5 75 513.5 76 371.0 77 261.0 78 151.0 79 93.5 80 36.0 81 22.5 82 9.0 83 6.5 84 4.0 85 3.5 86 3.0 87 3.5 88 4.0 89 3.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 351347.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.654237176225024 #Duplication Level Percentage of deduplicated Percentage of total 1 64.7842733741246 19.211282079256904 2 14.519001609754545 8.610998345953085 3 5.79745486164822 5.157573044573255 4 2.9022923201489146 3.4426105926572923 5 1.7310492315025017 2.5666472237348623 6 1.1410025074163643 2.030133538415539 7 0.8061676123670912 1.673439990664733 8 0.6327758632115328 1.5011588421652253 9 0.5221645325862451 1.3935951804892672 >10 6.917683288688803 44.7859393646378 >50 0.15645005413981358 3.017683083021158 >100 0.08370576145060091 4.564644592971781 >500 0.0029894914803786036 0.5452041997820247 >1k 0.0029894914803786036 1.4990899216770792 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 2017 0.5740763404839091 TruSeq Adapter, Index 19 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 1793 0.5103217047534204 TruSeq Adapter, Index 19 (95% over 21bp) CTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGCT 1263 0.35947368271253205 TruSeq Adapter, Index 13 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 730 0.2077718039431104 TruSeq Adapter, Index 19 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTGC 583 0.16593282424497718 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 532 0.15141725985991056 No Hit GCCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTG 452 0.12864774709902177 No Hit CGCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTG 422 0.12010917981368846 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCC 411 0.11697837180906624 No Hit TAGGTTGGGCATGGATAGAAGCATCTAGAAGGGAATGGTGGGCCTGAGGTA 387 0.11014751798079962 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 373 0.10616285324764407 No Hit AGCTGTCTCTTATACACATCTGACGCATGTGCTTTCGTATGCCGTCTTCTG 372 0.10587823433813295 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.846189095111101E-4 0.0 0.0 0.3739892470975987 0.0 2 2.846189095111101E-4 0.0 0.0 1.8836079431445267 0.0 3 2.846189095111101E-4 0.0 0.0 2.660048328290835 0.0 4 2.846189095111101E-4 0.0 0.0 3.632306523180787 0.0 5 2.846189095111101E-4 0.0 0.0 6.180784238943267 0.0 6 2.846189095111101E-4 0.0 0.0 7.447338386267707 0.0 7 2.846189095111101E-4 0.0 0.0 8.691123020831258 0.0 8 2.846189095111101E-4 0.0 0.0 10.578431009799429 0.0 9 2.846189095111101E-4 0.0 0.0 11.24016997441276 0.0 10 2.846189095111101E-4 0.0 0.0 12.717342114775422 0.0 11 2.846189095111101E-4 0.0 0.0 15.103871671026079 0.0 12 2.846189095111101E-4 0.0 0.0 16.837200829948742 0.0 13 2.846189095111101E-4 0.0 0.0 17.569525284120825 0.0 14 5.692378190222202E-4 0.0 0.0 17.86780590128847 0.0 15 5.692378190222202E-4 0.0 0.0 18.4911213131178 0.0 16 5.692378190222202E-4 0.0 0.0 19.69335158689273 0.0 17 5.692378190222202E-4 0.0 0.0 21.068345538740903 0.0 18 5.692378190222202E-4 0.0 0.0 22.56515638385983 0.0 19 8.538567285333303E-4 0.0 0.0 23.45487509499156 0.0 20 0.0011384756380444403 0.0 0.0 24.362809416332002 0.0 21 0.0011384756380444403 0.0 0.0 25.437815037555467 0.0 22 0.0011384756380444403 0.0 0.0 26.535305552630305 0.0 23 0.0011384756380444403 0.0 0.0 27.512117650072437 0.0 24 0.0011384756380444403 0.0 0.0 28.335520155288076 0.0 25 0.0011384756380444403 0.0 0.0 29.03340572140932 0.0 26 0.0011384756380444403 0.0 0.0 29.705675585674562 0.0 27 0.0011384756380444403 0.0 0.0 30.348060464441136 0.0 28 0.0011384756380444403 0.0 0.0 31.022322661072955 0.0 29 0.0011384756380444403 0.0 0.0 31.72504674865589 0.0 30 0.0011384756380444403 0.0 0.0 32.47985609667935 0.0 31 0.0011384756380444403 0.0 0.0 33.19652651082833 0.0 32 0.0011384756380444403 0.0 0.0 33.87050408855063 0.0 33 0.0011384756380444403 0.0 0.0 34.48869636000877 0.0 34 0.0011384756380444403 0.0 0.0 35.11286562856663 0.0 35 0.0011384756380444403 0.0 0.0 35.773181498632404 0.0 36 0.0011384756380444403 0.0 0.0 36.39393534027614 0.0 37 0.0011384756380444403 0.0 0.0 37.042297216142444 0.0 38 0.0011384756380444403 0.0 0.0 37.669312673795424 0.0 39 0.0011384756380444403 0.0 0.0 38.34699029734138 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAA 20 7.0265913E-4 45.000004 12 AGATCGG 20 7.0265913E-4 45.000004 1 GTCGAGG 20 7.0265913E-4 45.000004 1 AGGCGTA 20 7.0265913E-4 45.000004 22 TCTAGTT 20 7.0265913E-4 45.000004 12 ATCGTAG 20 7.0265913E-4 45.000004 38 CCGTACG 20 7.0265913E-4 45.000004 1 CGTAGTC 20 7.0265913E-4 45.000004 40 GTAGACG 20 7.0265913E-4 45.000004 1 TCGTAGT 20 7.0265913E-4 45.000004 39 ACGTCAT 20 7.0265913E-4 45.000004 25 TTACGCG 20 7.0265913E-4 45.000004 1 CGACTGG 20 7.0265913E-4 45.000004 2 TACGTCA 20 7.0265913E-4 45.000004 24 GTACGCG 20 7.0265913E-4 45.000004 11 CGAAGTA 20 7.0265913E-4 45.000004 16 TAGGTTG 95 0.0 45.0 1 TACGGGT 25 3.885258E-5 45.0 4 CACACGG 25 3.885258E-5 45.0 2 TACGGTT 60 0.0 44.999996 33 >>END_MODULE