##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935954.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 466622 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.928035969157047 33.0 31.0 34.0 30.0 34.0 2 32.052625036967825 33.0 31.0 34.0 30.0 34.0 3 32.14103064150426 33.0 31.0 34.0 30.0 34.0 4 35.76294945373343 37.0 35.0 37.0 35.0 37.0 5 35.73747701565721 37.0 35.0 37.0 35.0 37.0 6 35.727876096712116 37.0 35.0 37.0 35.0 37.0 7 35.84796473376738 37.0 35.0 37.0 35.0 37.0 8 35.066587087621244 37.0 35.0 37.0 32.0 37.0 9 37.04162469836399 39.0 37.0 39.0 33.0 39.0 10 36.959794008855134 39.0 37.0 39.0 33.0 39.0 11 36.99087484087762 39.0 37.0 39.0 33.0 39.0 12 36.92228399003905 39.0 37.0 39.0 33.0 39.0 13 36.76147502689543 39.0 35.0 39.0 32.0 39.0 14 37.980956748717375 40.0 37.0 41.0 33.0 41.0 15 37.97242736090455 40.0 37.0 41.0 33.0 41.0 16 38.29743775475653 40.0 37.0 41.0 34.0 41.0 17 38.053514407807604 40.0 37.0 41.0 33.0 41.0 18 38.124535491254164 40.0 37.0 41.0 33.0 41.0 19 38.16352422303277 40.0 37.0 41.0 34.0 41.0 20 37.62845729519825 40.0 36.0 41.0 32.0 41.0 21 37.91916583444415 40.0 37.0 41.0 33.0 41.0 22 37.83748515929382 40.0 37.0 41.0 33.0 41.0 23 37.636718800228024 40.0 36.0 41.0 32.0 41.0 24 37.65312608492527 40.0 36.0 41.0 32.0 41.0 25 37.8108468953457 40.0 36.0 41.0 33.0 41.0 26 37.49596461375589 40.0 36.0 41.0 32.0 41.0 27 37.28948485069285 40.0 36.0 41.0 31.0 41.0 28 37.32906721071874 40.0 36.0 41.0 31.0 41.0 29 37.31934842334909 40.0 36.0 41.0 32.0 41.0 30 37.30989966182477 40.0 36.0 41.0 32.0 41.0 31 37.45567718624497 40.0 36.0 41.0 32.0 41.0 32 37.01308339512496 40.0 36.0 41.0 31.0 41.0 33 36.89358410019245 40.0 35.0 41.0 30.0 41.0 34 36.83647792002949 40.0 36.0 41.0 31.0 41.0 35 36.7442448062886 40.0 35.0 41.0 30.0 41.0 36 36.59822940195704 40.0 35.0 41.0 30.0 41.0 37 36.43837624458341 40.0 35.0 41.0 30.0 41.0 38 36.54762098658014 39.0 35.0 41.0 30.0 41.0 39 36.443980352405156 39.0 35.0 41.0 30.0 41.0 40 36.31908268362829 39.0 35.0 41.0 30.0 41.0 41 36.35521257034602 39.0 35.0 41.0 29.0 41.0 42 36.263697382463754 39.0 35.0 41.0 30.0 41.0 43 36.06349679183579 39.0 35.0 41.0 29.0 41.0 44 36.26135930153315 39.0 35.0 41.0 30.0 41.0 45 36.279980369549655 39.0 35.0 41.0 30.0 41.0 46 36.21749938922726 39.0 35.0 41.0 29.0 41.0 47 36.05279005276219 39.0 35.0 41.0 29.0 41.0 48 36.01817316800322 39.0 35.0 41.0 29.0 41.0 49 36.07728525444578 39.0 35.0 41.0 29.0 41.0 50 35.83744444111079 39.0 35.0 41.0 28.0 41.0 51 35.06926805851417 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 9.0 10 6.0 11 3.0 12 9.0 13 3.0 14 8.0 15 11.0 16 26.0 17 47.0 18 103.0 19 231.0 20 673.0 21 1438.0 22 2902.0 23 4272.0 24 4764.0 25 4793.0 26 4769.0 27 4647.0 28 4589.0 29 5031.0 30 6494.0 31 8697.0 32 11887.0 33 15901.0 34 25725.0 35 33843.0 36 32550.0 37 48037.0 38 85347.0 39 159643.0 40 159.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 55.40801762454406 17.234292425132118 18.679359310105394 8.678330640218421 2 26.472819541298954 38.33874099378083 19.359781579093998 15.828657885826214 3 27.009013719884617 37.92834457012314 21.038013638448252 14.02462807154399 4 24.728581164197145 19.94612341466969 38.785140863482646 16.540154557650517 5 36.27925815756651 23.846068123663265 19.920192361268864 19.95448135750136 6 22.648310624016872 42.17482244729138 22.241986018661784 12.93488091002996 7 65.61499457805246 5.501883751730523 23.20893571241819 5.674185957798818 8 61.85842073455602 19.874545135034353 11.196857413495291 7.070176716914334 9 57.21569064467599 7.779316020247652 11.592895319980627 23.41209801509573 10 42.55307293698111 21.932527827663506 20.014272794681776 15.500126440673606 11 34.901697733925964 21.26517823848854 24.13923904145111 19.69388498613439 12 26.76256155946355 18.819944194658632 27.27303899087484 27.14445525500298 13 27.06494764498888 21.320683551139894 34.03804364131995 17.576325162551274 14 19.028678459223954 32.82721346185992 24.78708676401884 23.357021314897285 15 14.89749733188748 23.151287337502303 38.721920526678986 23.229294803931232 16 16.544012069726673 24.33190033903245 27.78523087209776 31.338856719143116 17 16.5215099159491 28.92469707814891 30.585784639386915 23.968008366515082 18 16.686525710317987 25.203698068243675 29.206724072161194 28.903052149277148 19 18.70593328218558 26.620690837551592 26.14043058407019 28.532945296192636 20 25.75553660136042 24.79394456326534 32.54690091765926 16.903617917714982 21 20.721911954429924 33.99218210885899 26.391383175246773 18.894522761464312 22 17.93678823544539 22.873117855566175 31.55937782616336 27.630716082825067 23 22.379142003591774 29.651409492051386 27.68793584528805 20.281512659068795 24 22.084256635992304 25.47608128206557 25.823685981372503 26.615976100569625 25 17.59475549802624 37.285640196990286 23.276870786203823 21.842733518779657 26 17.515676500465045 24.589925035681986 32.3388095717733 25.555588892079673 27 25.26949007976478 29.290946419157258 23.513036247755142 21.926527253322817 28 15.742935395244972 29.03249311005482 31.159482407601867 24.065089087098336 29 20.467959076082998 23.727342474208246 32.094714779843216 23.709983669865544 30 17.3020131926913 36.17446241283094 26.322376570328878 20.201147824148883 31 20.91564478314353 24.95960327631359 21.707506289887746 32.41724565065513 32 25.859046508737265 33.21382189438132 22.059825726176648 18.86730587070477 33 21.384118194170014 28.670315587349076 22.05853988881793 27.887026329662984 34 20.667478172910837 24.21938957014457 26.47367676620477 28.639455490739827 35 24.963460788389746 27.21239032878861 23.38380959320392 24.44033928961772 36 17.61061415878377 28.293993853697426 29.05628110119111 25.03911088632769 37 18.18709790794262 32.2423717698694 27.388121434480155 22.182408887707826 38 18.409547771000938 28.4645816099541 22.676384739682227 30.449485879362737 39 20.933003587486233 28.799756548126748 25.522585733205894 24.744654131181125 40 22.562802439662082 26.57332916150546 27.739369339636795 23.124499059195667 41 17.49788908366944 24.836377196103054 27.763585943225994 29.902147777001513 42 23.209364324871096 23.11185499183493 31.05854417494246 22.620236508351514 43 22.106115871090516 24.86766590516521 28.303637633887814 24.722580589856456 44 20.773131142552216 24.686148531359432 28.50272811826275 26.037992207825607 45 19.37221134022828 21.395047811719124 26.462532842429205 32.770208005623395 46 26.173648049170424 28.046684468370543 24.489844027928388 21.289823454530648 47 16.96962423546254 25.792825884763253 36.47877725439435 20.758772625379855 48 20.694266451217473 25.5714475528372 25.978629383098095 27.75565661284723 49 19.617806275743536 21.215244887724968 34.994492329980154 24.17245650655134 50 21.252105558674902 22.02746548598223 30.005657684378363 26.714771270964505 51 19.215982101143965 21.18652785338025 26.612332894719927 32.98515715075585 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 169.0 1 354.5 2 540.0 3 988.0 4 1436.0 5 1041.5 6 647.0 7 647.0 8 647.0 9 640.0 10 633.0 11 630.5 12 628.0 13 594.0 14 560.0 15 631.0 16 702.0 17 759.5 18 817.0 19 810.5 20 804.0 21 1017.0 22 1230.0 23 1216.5 24 1203.0 25 1779.0 26 2956.5 27 3558.0 28 4112.5 29 4667.0 30 5333.5 31 6000.0 32 7455.0 33 8910.0 34 9656.0 35 10402.0 36 11076.5 37 11751.0 38 13149.5 39 14548.0 40 16584.5 41 18621.0 42 21700.5 43 24780.0 44 56857.5 45 88935.0 46 68733.5 47 48532.0 48 48246.5 49 47961.0 50 40179.5 51 32398.0 52 29894.0 53 27390.0 54 24331.0 55 21272.0 56 19931.5 57 18591.0 58 17508.0 59 16425.0 60 16114.0 61 15803.0 62 14622.5 63 13442.0 64 10603.5 65 7765.0 66 6197.5 67 4630.0 68 3872.0 69 3114.0 70 2502.0 71 1890.0 72 1608.5 73 1327.0 74 1121.5 75 614.5 76 313.0 77 233.0 78 153.0 79 133.0 80 113.0 81 69.5 82 26.0 83 16.0 84 6.0 85 5.0 86 4.0 87 4.0 88 4.0 89 2.0 90 0.0 91 0.5 92 1.0 93 1.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 466622.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.936120305336242 #Duplication Level Percentage of deduplicated Percentage of total 1 71.6582688506755 20.735122883352748 2 11.30745173748221 6.543875676451371 3 4.177522888870796 3.626439146719835 4 2.0850878161318156 2.413374075791241 5 1.2571038975870348 1.8187854808442765 6 0.8789133763648961 1.5259405917878344 7 0.6688613165914836 1.3547976067133733 8 0.5550988922628485 1.2849926662301332 9 0.5102211710776158 1.328743906976829 >10 6.715469057336317 39.125434632452645 >50 0.11204879254187029 2.215326365901064 >100 0.05751838017149342 2.8525380086639025 >500 0.008963903403349623 1.7858353434554188 >1k 0.005228943651953947 3.9977033015260197 >5k 0.0 0.0 >10k+ 0.002240975850837406 9.391090313133333 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGC 16054 3.4404721594781216 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCG 14185 3.039933822237271 No Hit GAATCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTC 13208 2.8305566389925896 No Hit GCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC 4474 0.9588060571511845 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACAACGTT 3371 0.7224262893734115 No Hit GAATGACTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCT 3053 0.6542769093613245 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACAACGTTCGTA 2313 0.49569030178602813 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTC 2098 0.44961446309861086 No Hit GAACTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCT 2012 0.43118412762364394 No Hit CCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC 1174 0.25159550985594337 No Hit CTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGCT 946 0.20273369022463578 Illumina Single End Adapter 1 (95% over 21bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 790 0.16930191889795165 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGAACAACGATCGAATGC 751 0.16094397606628064 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATG 731 0.15665785153721856 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTACAACGT 716 0.153443258140422 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 709 0.15194311455525028 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 673 0.14422809040293857 No Hit GAATGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTT 654 0.1401562721003296 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTACAACGTTCGT 638 0.13672737247707997 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTACAACGTTCGTAT 597 0.1279408171925027 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGAACACCGATCGAATGC 537 0.11508244360531651 No Hit TCTGTCTCTTATACACATCTGACGCTACAACGTTCGTATGCCGTCTTCTGC 520 0.11143923775561375 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1430622645310336E-4 0.0 0.0 0.21280608286793165 0.0 2 2.1430622645310336E-4 0.0 0.0 1.6756603846368152 0.0 3 2.1430622645310336E-4 0.0 0.0 2.1302038909438474 0.0 4 2.1430622645310336E-4 0.0 0.0 3.0853667422453293 0.0 5 2.1430622645310336E-4 0.0 0.0 7.460642661511888 0.0 6 2.1430622645310336E-4 0.0 0.0 8.344227233178033 0.0 7 2.1430622645310336E-4 0.0 0.0 9.770649476449888 0.0 8 2.1430622645310336E-4 0.0 0.0 11.311939857100608 0.0 9 2.1430622645310336E-4 0.0 0.0 11.703905945283335 0.0 10 2.1430622645310336E-4 0.0 0.0 15.807012956954452 0.0 11 2.1430622645310336E-4 0.0 0.0 17.228934769470793 0.0 12 2.1430622645310336E-4 0.0 0.0 22.01032098786598 0.0 13 2.1430622645310336E-4 0.0 0.0 22.641024212317465 0.0 14 2.1430622645310336E-4 0.0 0.0 23.000844366532224 0.0 15 2.1430622645310336E-4 0.0 0.0 23.9176464032986 0.0 16 2.1430622645310336E-4 0.0 0.0 24.839591789499853 0.0 17 2.1430622645310336E-4 0.0 0.0 25.779538898723164 0.0 18 2.1430622645310336E-4 0.0 0.0 26.647050503405325 0.0 19 2.1430622645310336E-4 0.0 0.0 28.055685329881573 0.0 20 2.1430622645310336E-4 0.0 0.0 28.789469849257 0.0 21 2.1430622645310336E-4 0.0 0.0 29.45039025163837 0.0 22 4.286124529062067E-4 0.0 0.0 30.330545923681267 0.0 23 4.286124529062067E-4 0.0 0.0 31.066044892868316 0.0 24 4.286124529062067E-4 0.0 0.0 31.681960987694538 0.0 25 6.429186793593102E-4 0.0 0.0 32.19115258174711 0.0 26 6.429186793593102E-4 0.0 0.0 32.652125274847734 0.0 27 6.429186793593102E-4 0.0 0.0 33.23782419174407 0.0 28 6.429186793593102E-4 0.0 0.0 33.698582578618236 0.0 29 6.429186793593102E-4 0.0 0.0 34.19791608625397 0.0 30 6.429186793593102E-4 0.0 0.0 34.75875548088174 0.0 31 6.429186793593102E-4 0.0 0.0 35.28166267342731 0.0 32 6.429186793593102E-4 0.0 0.0 35.78228201842176 0.0 33 6.429186793593102E-4 0.0 0.0 36.244540548881105 0.0 34 8.572249058124134E-4 0.0 0.0 36.70079850499977 0.0 35 0.0010715311322655168 0.0 0.0 37.18727363904831 0.0 36 0.0010715311322655168 0.0 0.0 37.68917882140148 0.0 37 0.0010715311322655168 0.0 0.0 38.17329658695904 0.0 38 0.0010715311322655168 0.0 0.0 38.62119660024602 0.0 39 0.0010715311322655168 0.0 0.0 39.057095464851635 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGACAT 20 7.0289726E-4 45.000004 35 GATCGAG 30 2.1627184E-6 45.000004 1 GAAGACG 20 7.0289726E-4 45.000004 1 CGTGCGT 20 7.0289726E-4 45.000004 11 GCGAAAT 20 7.0289726E-4 45.000004 22 ATAGCGG 20 7.0289726E-4 45.000004 2 CGACAGG 30 2.1627184E-6 45.000004 2 AGCGGAA 30 2.1627184E-6 45.000004 4 TACGCGG 30 2.1627184E-6 45.000004 2 TACGCGC 30 2.1627184E-6 45.000004 34 TGCGCCC 20 7.0289726E-4 45.000004 45 TCTACGG 20 7.0289726E-4 45.000004 2 TATCTAG 20 7.0289726E-4 45.000004 19 ATAAGCG 20 7.0289726E-4 45.000004 33 CGTAAGC 65 0.0 45.000004 43 ATTATCG 30 2.1627184E-6 45.000004 30 GCTCGAA 115 0.0 45.000004 42 TAGTAAG 20 7.0289726E-4 45.000004 1 CGGGTCA 35 1.2098462E-7 45.0 6 CGCATGT 25 3.887231E-5 45.0 38 >>END_MODULE