##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935947.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 681865 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19261290724704 33.0 31.0 34.0 30.0 34.0 2 32.300128324521715 34.0 31.0 34.0 30.0 34.0 3 32.35650751981697 34.0 31.0 34.0 30.0 34.0 4 35.886134352107824 37.0 35.0 37.0 35.0 37.0 5 35.92149032433106 37.0 35.0 37.0 35.0 37.0 6 35.943792392922354 37.0 35.0 37.0 35.0 37.0 7 36.08245767123991 37.0 35.0 37.0 35.0 37.0 8 35.80401105790736 37.0 35.0 37.0 35.0 37.0 9 37.540260902084725 39.0 37.0 39.0 35.0 39.0 10 37.239626612305955 39.0 37.0 39.0 34.0 39.0 11 37.19925058479318 39.0 37.0 39.0 34.0 39.0 12 37.16987966826278 39.0 37.0 39.0 34.0 39.0 13 37.19236945729727 39.0 37.0 39.0 34.0 39.0 14 38.44277092972949 40.0 38.0 41.0 34.0 41.0 15 38.57883891972751 40.0 38.0 41.0 34.0 41.0 16 38.66078182631459 40.0 38.0 41.0 35.0 41.0 17 38.63053390333864 40.0 38.0 41.0 35.0 41.0 18 38.59480982305882 40.0 38.0 41.0 35.0 41.0 19 38.58635360371921 40.0 38.0 41.0 34.0 41.0 20 38.455304202444765 40.0 38.0 41.0 34.0 41.0 21 38.42689535318575 40.0 38.0 41.0 34.0 41.0 22 38.415953304539755 40.0 38.0 41.0 34.0 41.0 23 38.413278288224205 40.0 38.0 41.0 34.0 41.0 24 38.321166213253356 40.0 37.0 41.0 34.0 41.0 25 38.23055003556423 40.0 37.0 41.0 34.0 41.0 26 38.079813452809574 40.0 37.0 41.0 34.0 41.0 27 38.0510863587367 40.0 37.0 41.0 34.0 41.0 28 38.05007002852471 40.0 37.0 41.0 34.0 41.0 29 38.03957674906323 40.0 37.0 41.0 34.0 41.0 30 37.93960388053354 40.0 37.0 41.0 34.0 41.0 31 37.96407646674928 40.0 37.0 41.0 34.0 41.0 32 37.91048961304657 40.0 37.0 41.0 34.0 41.0 33 37.871236975061045 40.0 37.0 41.0 33.0 41.0 34 37.817482932838615 40.0 37.0 41.0 33.0 41.0 35 37.792818226481785 40.0 37.0 41.0 33.0 41.0 36 37.72319887367734 40.0 36.0 41.0 33.0 41.0 37 37.686896966408305 40.0 36.0 41.0 33.0 41.0 38 37.61940413424945 40.0 36.0 41.0 33.0 41.0 39 37.56131052334406 40.0 36.0 41.0 33.0 41.0 40 37.44733634957066 40.0 36.0 41.0 33.0 41.0 41 37.347923709238636 40.0 35.0 41.0 33.0 41.0 42 37.33593746562736 40.0 35.0 41.0 33.0 41.0 43 37.29806633277848 40.0 35.0 41.0 33.0 41.0 44 37.24632881875444 39.0 35.0 41.0 33.0 41.0 45 37.1326611572672 39.0 35.0 41.0 32.0 41.0 46 37.0678741393091 39.0 35.0 41.0 32.0 41.0 47 37.02720919830172 39.0 35.0 41.0 32.0 41.0 48 36.95078351286545 39.0 35.0 41.0 32.0 41.0 49 36.89813086168083 39.0 35.0 41.0 32.0 41.0 50 36.780972773202905 39.0 35.0 41.0 32.0 41.0 51 35.863393780293755 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 14.0 9 8.0 10 21.0 11 20.0 12 16.0 13 22.0 14 27.0 15 29.0 16 49.0 17 68.0 18 149.0 19 264.0 20 396.0 21 637.0 22 985.0 23 1390.0 24 2079.0 25 2862.0 26 3888.0 27 4793.0 28 5712.0 29 6516.0 30 8380.0 31 10557.0 32 13782.0 33 19530.0 34 36898.0 35 47583.0 36 47268.0 37 71058.0 38 133404.0 39 263216.0 40 243.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.91406656742904 21.222529386315472 24.060481180292285 11.802922865963204 2 31.319689381329148 24.753433597559635 25.58189670975926 18.344980311351954 3 32.80869380302553 24.600764080866448 25.595535773210237 16.995006342897785 4 29.603220578853584 26.09798127195266 24.856826497913808 19.441971651279946 5 25.81522735438833 30.091147074567548 23.785060092540313 20.30856547850381 6 26.042838391763766 35.366091528381716 23.416218752978963 15.174851326875554 7 80.56374795597368 6.5213788653179146 7.99205121248341 4.922821966224985 8 81.23382194422649 5.920820103686213 7.625263065269518 5.220094886817773 9 75.00868940332764 8.268058926620373 9.995380317218219 6.727871352833772 10 39.5287923562582 28.64525969216781 16.82591128742493 15.00003666414906 11 29.463163529437647 26.741070446496007 24.520982892508048 19.274783131558298 12 28.652592521980157 23.465788682510468 27.722203075388823 20.159415720120553 13 25.543032711753792 23.7981125296063 29.148731787083953 21.510122971555955 14 20.37030790552382 27.97357248135628 28.128001877204433 23.528117735915465 15 19.403400966466968 27.114018170752274 32.16267149655724 21.31990936622352 16 21.840833596093066 26.39158777763927 30.66765415441473 21.099924471852933 17 21.476098641226635 26.926004414363547 27.976065643492483 23.621831300917336 18 22.26804426096075 27.786731977737528 27.865779883114694 22.07944387818703 19 24.357607444288824 28.411489077749998 26.000454635448367 21.230448842512814 20 26.187295139067118 26.697806750603124 26.85150286347004 20.263395246859716 21 25.075784796110668 27.04846267222984 26.968534827275192 20.907217704384298 22 23.23993752429 25.36528491710236 27.185879902913335 24.208897655694308 23 22.900134190785565 26.808972450558393 27.839528352386466 22.45136500626957 24 22.67472300235384 25.60169535025262 28.64701957132277 23.076562076070775 25 22.815513334751014 27.447955240406824 26.287168281111363 23.449363143730796 26 21.56863895345853 29.08830926943017 26.49322079883848 22.849830978272827 27 22.89192142139573 28.196490507651806 26.671408563278654 22.24017950767381 28 20.425450785712716 28.670777939914792 27.187053155683312 23.716718118689183 29 21.897443042244433 27.076474082113027 26.838010456615315 24.188072419027225 30 22.26129805753338 26.681821181612197 26.68783410205833 24.369046658796094 31 22.46148431141062 27.752267677619468 24.66455970023392 25.121688310735994 32 23.19315407008719 28.81772784935435 24.4560140203706 23.533104060187867 33 22.81522002155852 28.112456278002245 24.16592727299392 24.906396427445316 34 21.5177491145608 27.49708520014959 26.611572672009853 24.373593013279756 35 21.826167936468362 26.791520315604995 25.547579066237454 25.834732681689193 36 21.536374502284175 30.42347092166338 24.765312781855645 23.2748417941968 37 21.470965660357987 28.215849178356418 26.793426851356205 23.519758309929383 38 21.82323480454342 27.58449253151284 25.486716578794923 25.105556085148823 39 23.212952710580538 26.090648442140306 26.68519428332588 24.011204563953275 40 23.275575077178033 25.7917622989888 29.662616500333645 21.27004612349952 41 19.76476281961972 28.370425230800816 27.948640859994278 23.91617108958518 42 21.08364558966951 28.39828998408776 26.652783175555278 23.865281250687453 43 22.123440857061148 27.261408049980567 26.583561262126665 24.031589830831614 44 22.48113629530772 26.202400768480565 25.990188673711074 25.326274262500643 45 22.17330409978515 25.1463266189055 26.59192068811275 26.0884485931966 46 21.966518299076796 27.563080668460767 26.002801140988318 24.46759989147412 47 21.1512542805394 26.6989800033731 28.151760245796453 23.99800547029104 48 20.725070211845452 25.7746034772279 28.139441091711703 25.360885219214946 49 21.510562941344695 25.55813834116724 28.40562281390011 24.525675903587953 50 20.014079033239717 24.49047832048866 29.47240289500121 26.02303975127041 51 20.266768348573397 24.692131140328364 26.92204468626488 28.11905582483336 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 220.0 1 636.0 2 1052.0 3 1896.0 4 2740.0 5 1928.0 6 1116.0 7 1054.0 8 992.0 9 988.5 10 985.0 11 976.0 12 967.0 13 1095.0 14 1223.0 15 1161.0 16 1099.0 17 1152.5 18 1206.0 19 1331.0 20 1456.0 21 1912.5 22 2369.0 23 2434.0 24 2499.0 25 3139.0 26 4743.0 27 5707.0 28 6935.5 29 8164.0 30 10146.0 31 12128.0 32 13423.0 33 14718.0 34 16631.5 35 18545.0 36 19676.5 37 20808.0 38 22753.0 39 24698.0 40 27445.0 41 30192.0 42 32740.0 43 35288.0 44 40036.0 45 44784.0 46 50407.5 47 56031.0 48 60842.5 49 65654.0 50 64862.5 51 64071.0 52 57771.5 53 51472.0 54 46048.0 55 40624.0 56 38049.5 57 35475.0 58 34068.5 59 32662.0 60 31285.5 61 29909.0 62 27284.0 63 24659.0 64 20517.0 65 16375.0 66 13357.5 67 10340.0 68 8400.5 69 6461.0 70 5632.5 71 4804.0 72 3869.5 73 2935.0 74 2413.5 75 1424.5 76 957.0 77 666.5 78 376.0 79 295.0 80 214.0 81 180.0 82 146.0 83 95.0 84 44.0 85 28.5 86 13.0 87 11.0 88 9.0 89 6.5 90 4.0 91 3.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 681865.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.08123020286819 #Duplication Level Percentage of deduplicated Percentage of total 1 70.9878918818572 21.354031173144644 2 10.359659072409201 6.232625787607462 3 3.728114613861048 3.3643882176669373 4 1.9313258001426419 2.3238662396331766 5 1.2333505084241418 1.8550350282365569 6 0.9392438286110791 1.6952165895043891 7 0.7940929364594742 1.672110469687632 8 0.6744986729919258 1.6231799883039386 9 0.636356996821365 1.722816118133041 >10 8.555326013510955 52.19037075038826 >50 0.1044603417886189 2.064725355965815 >100 0.053215645816085774 3.0942718256033506 >500 9.85474922520107E-4 0.21091918029476756 >1k 0.0014782123837801604 0.5964432758300384 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1463 0.2145586003094454 No Hit GCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 1406 0.20619917432336313 No Hit CCTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGC 1155 0.16938836866535165 No Hit CTGTCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTCTGCT 907 0.13301753279608133 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.799395774823462E-4 0.0 0.0 0.13888379664596365 0.0 2 8.799395774823462E-4 0.0 0.0 0.6523285401069127 0.0 3 8.799395774823462E-4 0.0 0.0 0.950628056873428 0.0 4 8.799395774823462E-4 0.0 0.0 1.3732923672574484 0.0 5 8.799395774823462E-4 0.0 0.0 2.5434653487127217 0.0 6 8.799395774823462E-4 0.0 0.0 3.355062952343939 0.0 7 8.799395774823462E-4 0.0 0.0 4.09817192552778 0.0 8 8.799395774823462E-4 0.0 0.0 5.313955108415889 0.0 9 0.001026596173729404 0.0 0.0 5.793082208355027 0.0 10 0.001026596173729404 0.0 0.0 6.813372148445807 0.0 11 0.001026596173729404 0.0 0.0 8.089431192391455 0.0 12 0.001026596173729404 0.0 0.0 9.205634546427811 0.0 13 0.001026596173729404 0.0 0.0 9.64941740667141 0.0 14 0.001026596173729404 0.0 0.0 9.851510196299854 0.0 15 0.001026596173729404 0.0 0.0 10.164622029287322 0.0 16 0.001026596173729404 0.0 0.0 10.800378374018317 0.0 17 0.001026596173729404 0.0 0.0 11.535567891004817 0.0 18 0.001026596173729404 0.0 0.0 12.310941315363012 0.0 19 0.001026596173729404 0.0 0.0 12.792414920842102 0.0 20 0.001026596173729404 0.0 0.0 13.274181839513687 0.0 21 0.001026596173729404 0.0 0.0 13.932083330277987 0.0 22 0.001026596173729404 0.0 0.0 14.590718104023523 0.0 23 0.001026596173729404 0.0 0.0 15.223687973425825 0.0 24 0.001026596173729404 0.0 0.0 15.741532414774186 0.0 25 0.001026596173729404 0.0 0.0 16.21625981682591 0.0 26 0.001026596173729404 0.0 0.0 16.625725033547695 0.0 27 0.001026596173729404 0.0 0.0 17.048536000527964 0.0 28 0.0011732527699764616 0.0 0.0 17.489532385442867 0.0 29 0.0013199093662235194 0.0 0.0 17.963233191320864 0.0 30 0.0013199093662235194 0.0 0.0 18.509822325533648 0.0 31 0.0013199093662235194 0.0 0.0 19.008748065966138 0.0 32 0.0013199093662235194 0.0 0.0 19.490221671445227 0.0 33 0.0016132225587176348 0.0 0.0 19.925938418895235 0.0 34 0.0016132225587176348 0.0 0.0 20.351975830992938 0.0 35 0.0017598791549646923 0.0 0.0 20.79707860060276 0.0 36 0.0017598791549646923 0.0 0.0 21.28148533800679 0.0 37 0.0017598791549646923 0.0 0.0 21.751813042171104 0.0 38 0.0017598791549646923 0.0 0.0 22.226100474434087 0.0 39 0.0017598791549646923 0.0 0.0 22.694814956039686 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGACA 40 6.8084773E-9 45.0 26 CGCATGT 20 7.031266E-4 45.0 38 ATCCGTG 20 7.031266E-4 45.0 10 TACGCGC 20 7.031266E-4 45.0 34 TCGTAAG 55 1.8189894E-12 45.0 1 CGCACGA 20 7.031266E-4 45.0 40 CGCATCG 25 3.8891318E-5 44.999996 21 GGTTAAC 25 3.8891318E-5 44.999996 9 AATACGG 55 6.002665E-11 40.909092 2 TTTGCGG 135 0.0 40.0 2 TACGGGA 320 0.0 38.671875 4 TAGAACG 35 6.2445524E-6 38.571426 1 TCTACGG 35 6.2445524E-6 38.571426 2 GGCGTAG 65 9.094947E-12 38.076927 1 TAGCGCG 30 1.1394351E-4 37.499996 1 TAACGCC 30 1.1394351E-4 37.499996 12 TCTAACG 30 1.1394351E-4 37.499996 32 CGTACTA 30 1.1394351E-4 37.499996 37 GCGATAC 30 1.1394351E-4 37.499996 9 TGTAGCG 30 1.1394351E-4 37.499996 1 >>END_MODULE