##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935943.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 523003 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19006583136235 33.0 31.0 34.0 30.0 34.0 2 32.29514935860789 34.0 31.0 34.0 30.0 34.0 3 32.3473421758575 34.0 31.0 34.0 30.0 34.0 4 35.88153414033954 37.0 35.0 37.0 35.0 37.0 5 35.919119010789615 37.0 35.0 37.0 35.0 37.0 6 35.93531394657392 37.0 35.0 37.0 35.0 37.0 7 36.08689051496837 37.0 35.0 37.0 35.0 37.0 8 35.795450504108004 37.0 35.0 37.0 35.0 37.0 9 37.54481140643553 39.0 37.0 39.0 35.0 39.0 10 37.26584933547226 39.0 37.0 39.0 34.0 39.0 11 37.220981524006554 39.0 37.0 39.0 34.0 39.0 12 37.15212149834704 39.0 37.0 39.0 34.0 39.0 13 37.1610583495697 39.0 37.0 39.0 34.0 39.0 14 38.385976753479426 40.0 38.0 41.0 34.0 41.0 15 38.525408076053104 40.0 38.0 41.0 34.0 41.0 16 38.60260457396994 40.0 38.0 41.0 35.0 41.0 17 38.57487624353971 40.0 38.0 41.0 34.0 41.0 18 38.54432957363533 40.0 38.0 41.0 34.0 41.0 19 38.5335992336564 40.0 38.0 41.0 34.0 41.0 20 38.4195960635025 40.0 37.0 41.0 34.0 41.0 21 38.397087588407715 40.0 37.0 41.0 34.0 41.0 22 38.398420276747935 40.0 37.0 41.0 34.0 41.0 23 38.38558287428562 40.0 37.0 41.0 34.0 41.0 24 38.31170758102726 40.0 37.0 41.0 34.0 41.0 25 38.22613828218959 40.0 37.0 41.0 34.0 41.0 26 38.0873933801527 40.0 37.0 41.0 34.0 41.0 27 38.042020791467735 40.0 37.0 41.0 34.0 41.0 28 38.0466001151045 40.0 37.0 41.0 34.0 41.0 29 38.01646453270823 40.0 37.0 41.0 34.0 41.0 30 37.92447653263939 40.0 36.0 41.0 34.0 41.0 31 37.95302130198106 40.0 37.0 41.0 34.0 41.0 32 37.87895671726548 40.0 36.0 41.0 34.0 41.0 33 37.84982877727279 40.0 36.0 41.0 33.0 41.0 34 37.8084466054688 40.0 36.0 41.0 33.0 41.0 35 37.763379942371266 40.0 36.0 41.0 33.0 41.0 36 37.68566719502565 40.0 36.0 41.0 33.0 41.0 37 37.65419701225423 40.0 36.0 41.0 33.0 41.0 38 37.56716309466676 40.0 36.0 41.0 33.0 41.0 39 37.52443867434795 40.0 36.0 41.0 33.0 41.0 40 37.42903769194441 40.0 35.0 41.0 33.0 41.0 41 37.33091205977786 40.0 35.0 41.0 33.0 41.0 42 37.30456421856089 40.0 35.0 41.0 33.0 41.0 43 37.24187050552291 39.0 35.0 41.0 33.0 41.0 44 37.1584503339369 39.0 35.0 41.0 33.0 41.0 45 37.050670837452174 39.0 35.0 41.0 32.0 41.0 46 36.97686246541607 39.0 35.0 41.0 32.0 41.0 47 36.92789333904395 39.0 35.0 41.0 32.0 41.0 48 36.838434961176134 39.0 35.0 41.0 32.0 41.0 49 36.805939927686836 39.0 35.0 41.0 32.0 41.0 50 36.67259078819816 39.0 35.0 41.0 31.0 41.0 51 35.71779320577511 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 12.0 10 14.0 11 13.0 12 10.0 13 12.0 14 15.0 15 22.0 16 30.0 17 61.0 18 95.0 19 173.0 20 280.0 21 452.0 22 716.0 23 1030.0 24 1435.0 25 2137.0 26 2864.0 27 3510.0 28 4206.0 29 5067.0 30 6419.0 31 8140.0 32 10642.0 33 15495.0 34 29871.0 35 39851.0 36 36387.0 37 55619.0 38 103282.0 39 194955.0 40 182.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.87909820784967 21.264505174922515 23.84498750485179 11.011409112376029 2 32.88508861325843 24.37175312569909 24.914962246870477 17.828196014172004 3 33.482981933182025 24.41840677778139 25.029493138662684 17.0691181503739 4 29.711110643724798 25.85166815486718 25.41648900675522 19.020732194652805 5 26.313615791878824 30.02793483020174 23.36143387322826 20.297015504691178 6 26.163712254040604 35.24511331674962 23.251491865247427 15.339682563962349 7 80.01445498400582 6.73973189446332 8.041445268956391 5.204367852574459 8 80.04466513576403 6.0783590151490525 8.17547891694694 5.701496932139968 9 73.65521803890226 8.912185972164597 10.506823096617037 6.925772892316105 10 40.16286713460534 26.902331344179668 17.763378030336348 15.171423490878638 11 30.17936799597708 25.094119919006204 24.891635420829324 19.834876664187394 12 27.753186884205256 23.148050775999373 28.37077416381933 20.727988175976044 13 24.47825347082139 24.124335806869176 30.456613059580924 20.94079766272851 14 21.138693277094013 27.022024730259673 29.422966981068942 22.41631501157737 15 20.323975197083 26.1273835905339 32.439010866094456 21.109630346288643 16 22.942698225440388 25.240390590493746 30.243421165844175 21.57349001822169 17 22.52855146146389 25.740961332917784 27.915709852524746 23.81477735309358 18 23.693936746060732 26.010175849851723 28.417045408917346 21.878841995170202 19 23.67768444922878 27.384164144373933 26.766768068252 22.171383338145287 20 25.970979133962903 26.613614071047394 27.308447561486265 20.106959233503442 21 25.234080875253106 26.794301371120245 28.005384290338682 19.966233463287974 22 23.66181455938111 24.377871637447587 27.56064496761969 24.399668835551612 23 22.0362024692019 25.95721248252878 28.7174260950702 23.28915895319912 24 23.222237730949917 24.72452356869846 28.977271640889253 23.075967059462375 25 22.552260694489323 26.530822958950523 26.996977072789257 23.919939273770897 26 21.390699479735297 28.042095360829673 27.19276944874121 23.37443571069382 27 22.335627137894047 27.243820781142748 27.725271174352727 22.695280906610478 28 20.677319250558792 27.403093290095846 28.466184706397478 23.45340275294788 29 21.653030670952177 26.475756353214035 27.636170347015216 24.235042628818572 30 22.850920549212912 26.150519213082905 26.936747972764973 24.061812264939206 31 24.182270464987774 27.37020628944767 24.976529771339745 23.470993474224812 32 23.81496855658572 28.669625222035055 24.532364059097176 22.983042162282054 33 23.02243008166301 27.702709162280144 24.027969246830324 25.246891509226526 34 22.207903205144138 27.86217287472538 26.344781961097734 23.58514195903274 35 22.61382821895859 27.70385638323298 25.202341095557767 24.479974302250657 36 22.289738299780307 29.907859037137452 24.556264495614748 23.24613816746749 37 22.97673244704141 29.538262686829714 25.234080875253106 22.25092399087577 38 22.702546639311823 29.40900912614268 24.36181054410778 23.526633690437723 39 24.129115894172692 26.30309959981109 25.41323854738883 24.154545958627388 40 24.486092813999154 25.484939856941548 27.096402888702357 22.93256444035694 41 20.91919166811663 28.001177813511585 26.156828928323545 24.92280159004824 42 21.836777226899272 28.33253346539121 25.88455515551536 23.94613415219416 43 22.48782511763795 26.63254321676931 26.966958124523188 23.912673541069555 44 22.206373577207014 26.31227736743384 25.977480052695682 25.503869002663464 45 23.195660445542376 24.940201107833033 25.785702950078683 26.07843549654591 46 23.190115544270302 26.785506010481775 25.865243602809162 24.15913484243876 47 22.141173186387075 26.84038141272612 27.698693888945186 23.319751511941615 48 21.458003108968782 26.280728791230644 27.708445267044358 24.55282283275622 49 22.638684672936865 24.811712361114562 28.571155423582656 23.978447542365913 50 21.634483932214536 24.734274946797626 28.300602482203736 25.330638638784098 51 21.1866853536213 24.132748760523363 26.848603162888168 27.831962722967173 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 226.0 1 535.5 2 845.0 3 1209.5 4 1574.0 5 1146.5 6 719.0 7 728.5 8 738.0 9 770.0 10 802.0 11 809.0 12 816.0 13 839.0 14 862.0 15 874.5 16 887.0 17 921.0 18 955.0 19 972.5 20 990.0 21 1131.5 22 1273.0 23 1523.0 24 1773.0 25 2191.0 26 3241.5 27 3874.0 28 5104.0 29 6334.0 30 7279.0 31 8224.0 32 9091.0 33 9958.0 34 11700.0 35 13442.0 36 14507.5 37 15573.0 38 17434.5 39 19296.0 40 21062.0 41 22828.0 42 25044.5 43 27261.0 44 30949.5 45 34638.0 46 38250.0 47 41862.0 48 47121.5 49 52381.0 50 51631.5 51 50882.0 52 45536.5 53 40191.0 54 35771.5 55 31352.0 56 28979.0 57 26606.0 58 26023.5 59 25441.0 60 23400.0 61 21359.0 62 19580.5 63 17802.0 64 15629.0 65 13456.0 66 11065.5 67 8675.0 68 7313.0 69 5951.0 70 5224.0 71 4497.0 72 3517.0 73 2537.0 74 2220.5 75 1340.0 76 776.0 77 621.0 78 466.0 79 332.0 80 198.0 81 165.5 82 133.0 83 80.0 84 27.0 85 15.0 86 3.0 87 3.0 88 3.0 89 3.0 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 523003.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.69822494392241 #Duplication Level Percentage of deduplicated Percentage of total 1 70.97535839697555 21.788175175458676 2 11.03268482449313 6.773676809553783 3 3.9779734490635392 3.6635017128091016 4 2.0613285831636206 2.5311651411717477 5 1.220439425679271 1.8732662009966865 6 0.9252463670668282 1.7042052662858698 7 0.7117522372353285 1.52946711980931 8 0.5852537348429364 1.4373000641183344 9 0.5497456942764269 1.5188595286365496 >10 7.7877011315505 51.13972586105528 >50 0.12151685416422423 2.4233756430381783 >100 0.04785119645845099 2.6883659131454793 >500 0.0018888630180967498 0.42154907301533473 >1k 0.0012592420120644998 0.5073664909056643 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGC 1490 0.2848932032894649 No Hit CCTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGC 1135 0.21701596357955882 No Hit CTGTCTCTTATACACATCTGACGCACAGCGAATCGTATGCCGTCTTCTGCT 881 0.16845027657585138 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 666 0.12734152576562657 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 634 0.12122301401712801 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9120349214058046E-4 0.0 0.0 0.17552480578505286 0.0 2 1.9120349214058046E-4 0.0 0.0 0.8694022787632193 0.0 3 1.9120349214058046E-4 0.0 0.0 1.2521916700286615 0.0 4 1.9120349214058046E-4 0.0 0.0 1.757351296264075 0.0 5 1.9120349214058046E-4 0.0 0.0 3.0969229622009817 0.0 6 1.9120349214058046E-4 0.0 0.0 3.892520692997937 0.0 7 1.9120349214058046E-4 0.0 0.0 4.692516104114126 0.0 8 1.9120349214058046E-4 0.0 0.0 6.017365101156208 0.0 9 1.9120349214058046E-4 0.0 0.0 6.530364070569385 0.0 10 1.9120349214058046E-4 0.0 0.0 7.620415179262834 0.0 11 1.9120349214058046E-4 0.0 0.0 9.136467668445496 0.0 12 1.9120349214058046E-4 0.0 0.0 10.326518203528469 0.0 13 3.8240698428116093E-4 0.0 0.0 10.821735248172573 0.0 14 3.8240698428116093E-4 0.0 0.0 11.016380403171684 0.0 15 3.8240698428116093E-4 0.0 0.0 11.376034171888115 0.0 16 3.8240698428116093E-4 0.0 0.0 12.140465733466156 0.0 17 3.8240698428116093E-4 0.0 0.0 13.050211949071038 0.0 18 5.736104764217414E-4 0.0 0.0 14.000684508501863 0.0 19 5.736104764217414E-4 0.0 0.0 14.572382950002199 0.0 20 5.736104764217414E-4 0.0 0.0 15.15937767087378 0.0 21 5.736104764217414E-4 0.0 0.0 15.848857463532713 0.0 22 5.736104764217414E-4 0.0 0.0 16.59569830383382 0.0 23 5.736104764217414E-4 0.0 0.0 17.344068772072053 0.0 24 5.736104764217414E-4 0.0 0.0 17.910222312300313 0.0 25 5.736104764217414E-4 0.0 0.0 18.435267101718345 0.0 26 5.736104764217414E-4 0.0 0.0 18.89721473872999 0.0 27 5.736104764217414E-4 0.0 0.0 19.38516605067275 0.0 28 7.648139685623219E-4 0.0 0.0 19.874838194044777 0.0 29 9.560174607029022E-4 0.0 0.0 20.39644132060428 0.0 30 9.560174607029022E-4 0.0 0.0 20.960491622418992 0.0 31 9.560174607029022E-4 0.0 0.0 21.494522975967634 0.0 32 9.560174607029022E-4 0.0 0.0 22.00752194538081 0.0 33 9.560174607029022E-4 0.0 0.0 22.50445982145418 0.0 34 9.560174607029022E-4 0.0 0.0 23.00216251149611 0.0 35 9.560174607029022E-4 0.0 0.0 23.524721655516316 0.0 36 0.0011472209528434827 0.0 0.0 24.01095213602981 0.0 37 0.0011472209528434827 0.0 0.0 24.518597407663055 0.0 38 0.0011472209528434827 0.0 0.0 25.02394823739061 0.0 39 0.0011472209528434827 0.0 0.0 25.542683311568002 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTAT 20 7.029758E-4 45.0 23 ATAGCCG 20 7.029758E-4 45.0 1 CTACGAT 20 7.029758E-4 45.0 30 TTCGGTA 20 7.029758E-4 45.0 22 CGGTCTA 35 1.2102282E-7 45.0 31 ATAACGG 35 1.2102282E-7 45.0 2 GCGCTAG 25 3.8878796E-5 45.0 1 TATCGCG 20 7.029758E-4 45.0 32 AATCCGG 30 2.163224E-6 44.999996 2 TAACGGG 80 0.0 42.1875 3 CACGGGT 55 6.002665E-11 40.909092 4 ATAGCGG 55 6.002665E-11 40.909092 2 CGCGCAT 55 6.002665E-11 40.909092 36 CCCGATG 50 1.0786607E-9 40.5 15 CGTTCGG 45 1.9248546E-8 40.000004 2 GTACGAG 45 1.9248546E-8 40.000004 1 TCGACGT 40 3.453406E-7 39.375 26 CGTATGG 70 0.0 38.571426 2 TAGAACG 35 6.2417603E-6 38.571426 1 GCGATAA 35 6.2417603E-6 38.571426 9 >>END_MODULE