##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935941.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 426120 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.99392189993429 33.0 31.0 34.0 30.0 34.0 2 32.12095419130761 33.0 31.0 34.0 30.0 34.0 3 32.20267060921806 34.0 31.0 34.0 30.0 34.0 4 35.79955646296818 37.0 35.0 37.0 35.0 37.0 5 35.77103867455177 37.0 35.0 37.0 35.0 37.0 6 35.7765230451516 37.0 35.0 37.0 35.0 37.0 7 35.91341171500986 37.0 35.0 37.0 35.0 37.0 8 35.28224913169999 37.0 35.0 37.0 32.0 37.0 9 37.175722801088895 39.0 37.0 39.0 34.0 39.0 10 37.03173753872149 39.0 37.0 39.0 33.0 39.0 11 37.02403078944898 39.0 37.0 39.0 33.0 39.0 12 36.94258894208204 39.0 37.0 39.0 33.0 39.0 13 36.83822632122407 39.0 36.0 39.0 33.0 39.0 14 38.05398244625927 40.0 37.0 41.0 33.0 41.0 15 38.08285459494978 40.0 37.0 41.0 33.0 41.0 16 38.35851403360556 40.0 37.0 41.0 34.0 41.0 17 38.138315497981786 40.0 37.0 41.0 33.0 41.0 18 38.20068525298038 40.0 37.0 41.0 34.0 41.0 19 38.22743593353985 40.0 37.0 41.0 34.0 41.0 20 37.75058199568197 40.0 36.0 41.0 32.0 41.0 21 37.996299164554586 40.0 37.0 41.0 33.0 41.0 22 37.85851403360556 40.0 37.0 41.0 33.0 41.0 23 37.70441424950718 40.0 36.0 41.0 33.0 41.0 24 37.72720360461842 40.0 36.0 41.0 33.0 41.0 25 37.877119121374264 40.0 36.0 41.0 33.0 41.0 26 37.55220125786163 40.0 36.0 41.0 32.0 41.0 27 37.38101473763259 40.0 36.0 41.0 32.0 41.0 28 37.37100581995682 40.0 36.0 41.0 32.0 41.0 29 37.295818079414246 40.0 36.0 41.0 31.0 41.0 30 37.322477236459214 40.0 36.0 41.0 32.0 41.0 31 37.417046841265375 40.0 36.0 41.0 32.0 41.0 32 37.1084952595513 40.0 36.0 41.0 31.0 41.0 33 36.97538956162583 40.0 35.0 41.0 31.0 41.0 34 36.77621092649958 40.0 35.0 41.0 30.0 41.0 35 36.67710034732001 40.0 35.0 41.0 30.0 41.0 36 36.77014690697456 40.0 35.0 41.0 30.0 41.0 37 36.52939782220971 40.0 35.0 41.0 30.0 41.0 38 36.482784192246314 40.0 35.0 41.0 30.0 41.0 39 36.391718295315876 40.0 35.0 41.0 30.0 41.0 40 36.32742654651272 39.0 35.0 41.0 29.0 41.0 41 36.31958368534685 39.0 35.0 41.0 29.0 41.0 42 36.313463343659066 39.0 35.0 41.0 30.0 41.0 43 36.22563831784474 39.0 35.0 41.0 30.0 41.0 44 36.34165962639632 39.0 35.0 41.0 30.0 41.0 45 36.279634844644704 39.0 35.0 41.0 30.0 41.0 46 36.210391439031255 39.0 35.0 41.0 29.0 41.0 47 36.069931005350604 39.0 35.0 41.0 29.0 41.0 48 36.00585046465784 39.0 35.0 41.0 29.0 41.0 49 36.026893832723175 39.0 35.0 41.0 29.0 41.0 50 35.86408288744954 39.0 35.0 41.0 28.0 41.0 51 35.015063831784474 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 4.0 10 9.0 11 9.0 12 4.0 13 6.0 14 7.0 15 12.0 16 23.0 17 39.0 18 137.0 19 317.0 20 726.0 21 1768.0 22 2923.0 23 3702.0 24 4019.0 25 3985.0 26 4134.0 27 4117.0 28 4242.0 29 4617.0 30 5686.0 31 7688.0 32 10333.0 33 13737.0 34 23693.0 35 30792.0 36 28146.0 37 42285.0 38 77603.0 39 151211.0 40 144.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 50.84999530648644 18.60485309302544 21.051816389749366 9.493335210738758 2 27.89003097718952 35.684783629024686 20.734065521449356 15.691119872336431 3 27.77621327325636 36.01121749741857 21.384117150098565 14.828452079226508 4 26.036797146343755 21.22899652679996 36.01778841640852 16.716417910447763 5 34.72073594292687 25.1107669201164 20.60358584436309 19.56491129259364 6 23.080822303576458 41.361822960668356 21.758894208204264 13.798460527550924 7 70.60687130385807 5.247348164836197 19.415657561250352 4.730122970055383 8 68.34905660377359 16.149676147564065 9.577818454895334 5.9234487937670135 9 63.16131606120342 7.507040270346381 9.752651835163803 19.5789918332864 10 42.770346381301046 24.45203229137332 18.077302168403268 14.70031915892237 11 34.86881629587909 23.19956819675209 23.427672955974842 18.503942551393973 12 28.197456115648173 19.196001126443253 27.165117807190462 25.441424950718105 13 27.858115084952594 21.126208579742794 31.97690791326387 19.03876842204074 14 19.245283018867926 33.02543884351826 24.718154510466537 23.01112362714728 15 15.838730873932224 24.532760724678496 36.772036046184176 22.856472355205106 16 17.968647329390784 24.81437153853375 28.84563033887168 28.371350793203792 17 17.68445508307519 28.89702431240026 30.098563784849336 23.31995681967521 18 18.567304984511406 26.545104665352483 27.43968835069933 27.44790199943678 19 20.809161738477425 27.493429081010046 24.935464188491505 26.761944992021025 20 27.723645921336715 25.235614380925558 29.59494977940486 17.445789918332864 21 22.431240026283675 32.76025532713789 25.713179386088424 19.095325260490004 22 19.320848587252417 23.803623392471604 30.50807284333052 26.36745517694546 23 23.621045714822117 29.29878907350042 27.27729278137614 19.802872430301324 24 22.84473857129447 26.616446071529147 25.66577489908946 24.873040458086923 25 19.29785037078757 35.114991082324224 23.671735661316063 21.915422885572138 26 19.26663850558528 26.67136018023092 29.648690509715575 24.413310804468225 27 25.844597765887546 29.262649019055665 23.51309490284427 21.37965831221252 28 18.363606495822772 30.91523514502957 28.76020839200225 21.960949967145403 29 22.47301229700554 27.749929597296536 27.248897024312402 22.528161081385527 30 20.524500140805408 34.15094339622641 25.072280108889515 20.252276354078663 31 25.96967990237492 26.278747770581056 20.87393222566413 26.87764010137989 32 30.065943865577772 29.78691448418286 21.2167933915329 18.930348258706466 33 25.70801652116775 28.706467661691544 21.53712569229325 24.04839012484746 34 27.035342157138835 26.74786445132826 23.020745329954003 23.196048061578896 35 24.03689101661504 26.440908664226036 23.121421195907256 26.400779123251667 36 22.09213367126631 33.0780061954379 24.55904440063832 20.270815732657468 37 24.191307612879 28.79705247348165 26.220548202384304 20.791091711255046 38 24.22674364028912 26.377780906786818 22.722003191589224 26.673472261334837 39 28.958509340091993 25.16708908288745 24.695625645358117 21.178775931662443 40 21.362526987702996 26.16891955317751 27.559842297944243 24.908711161175255 41 21.81263493851497 26.364639068806913 26.80113583028255 25.02159016239557 42 21.362057636346567 24.748662348634188 28.694029850746265 25.195250164272977 43 23.670092931568572 26.822256641321694 26.83727588472731 22.670374542382426 44 23.564958227729278 25.096686379423637 27.249366375668828 24.088989017178257 45 22.40472167464564 22.772223786726745 25.241246597202665 29.581807941424948 46 27.483103351168687 27.94517976156951 23.20731249413311 21.364404393128698 47 19.52642448136675 27.04097437341594 32.64714165023937 20.78545949497794 48 23.362198441753495 25.124847460809164 26.04430676804656 25.46864732939078 49 21.534778935511124 22.244672862104572 32.12968177978034 24.090866422603963 50 22.20900215901624 23.460058199568195 28.980334178165773 25.350605463249785 51 20.65122500704027 22.993288275603117 25.62611470947151 30.729372007885104 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 149.0 1 322.0 2 495.0 3 876.0 4 1257.0 5 914.5 6 572.0 7 560.5 8 549.0 9 532.5 10 516.0 11 552.0 12 588.0 13 552.0 14 516.0 15 565.5 16 615.0 17 693.0 18 771.0 19 751.5 20 732.0 21 980.0 22 1228.0 23 1261.5 24 1295.0 25 1819.0 26 3121.5 27 3900.0 28 4230.5 29 4561.0 30 5188.0 31 5815.0 32 6702.5 33 7590.0 34 8715.5 35 9841.0 36 11027.0 37 12213.0 38 13391.5 39 14570.0 40 15255.5 41 15941.0 42 18629.5 43 21318.0 44 22855.0 45 24392.0 46 45661.0 47 66930.0 48 54079.0 49 41228.0 50 39909.5 51 38591.0 52 34160.0 53 29729.0 54 26849.0 55 23969.0 56 22695.5 57 21422.0 58 20253.0 59 19084.0 60 18885.5 61 18687.0 62 16171.5 63 13656.0 64 11257.0 65 8858.0 66 6862.0 67 4866.0 68 3914.0 69 2962.0 70 2478.0 71 1994.0 72 1596.5 73 1199.0 74 904.5 75 428.5 76 247.0 77 191.5 78 136.0 79 124.5 80 113.0 81 82.5 82 52.0 83 35.0 84 18.0 85 9.0 86 0.0 87 0.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 426120.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.44212625908429 #Duplication Level Percentage of deduplicated Percentage of total 1 72.38575781056896 22.035763786288374 2 10.004604123296973 6.091228437871235 3 3.5977842211362185 3.2857260453831008 4 1.8400906114418125 2.2406508288666913 5 1.269738846351546 1.9326775138348895 6 0.9817034143825719 1.7931083573765039 7 0.7978956012589293 1.700274704456461 8 0.7480705746247556 1.8218287106746038 9 0.7037639026110244 1.9281662621883637 >10 7.526888765162089 42.59181250585542 >50 0.0869980457648277 1.7642636952458386 >100 0.0473828642112008 2.816059019793954 >500 0.00233030479727217 0.4935019879343339 >1k 0.00466060959454434 2.5531101886569254 >5k 0.0015535365315147802 4.42401949797003 >10k+ 7.767682657573901E-4 2.5278084576032724 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGC 10690 2.5086830000938702 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTC 9474 2.223317375387215 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCG 9235 2.1672298882943775 No Hit GCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 2536 0.5951375199474327 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAGGAGCTT 2070 0.4857786539003098 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCT 1913 0.4489345724209143 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTA 1507 0.353656247066554 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTC 1394 0.3271378954285178 No Hit GAACTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCT 1377 0.32314840889890173 No Hit CCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 769 0.180465596545574 No Hit CTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGCT 709 0.1663850558528114 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 609 0.14291748803154042 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATG 497 0.1166338120717169 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTT 476 0.11170562282924999 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.040270346381301E-4 0.0 0.0 0.17600675865953253 0.0 2 7.040270346381301E-4 0.0 0.0 1.1367689852623675 0.0 3 7.040270346381301E-4 0.0 0.0 1.462498826621609 0.0 4 7.040270346381301E-4 0.0 0.0 2.216746456397259 0.0 5 7.040270346381301E-4 0.0 0.0 5.664836196376608 0.0 6 7.040270346381301E-4 0.0 0.0 6.415094339622642 0.0 7 7.040270346381301E-4 0.0 0.0 7.507744297381019 0.0 8 7.040270346381301E-4 0.0 0.0 8.757157608185487 0.0 9 7.040270346381301E-4 0.0 0.0 9.103069557871022 0.0 10 7.040270346381301E-4 0.0 0.0 12.13460996902281 0.0 11 7.040270346381301E-4 0.0 0.0 13.363841171500985 0.0 12 7.040270346381301E-4 0.0 0.0 16.952970994086172 0.0 13 7.040270346381301E-4 0.0 0.0 17.469022810475924 0.0 14 7.040270346381301E-4 0.0 0.0 17.727400732188116 0.0 15 7.040270346381301E-4 0.0 0.0 18.408664226039612 0.0 16 7.040270346381301E-4 0.0 0.0 19.15329015300854 0.0 17 7.040270346381301E-4 0.0 0.0 19.906364404393127 0.0 18 7.040270346381301E-4 0.0 0.0 20.62681873650615 0.0 19 7.040270346381301E-4 0.0 0.0 21.64014831502863 0.0 20 9.387027128508401E-4 0.0 0.0 22.221674645639727 0.0 21 9.387027128508401E-4 0.0 0.0 22.81446540880503 0.0 22 9.387027128508401E-4 0.0 0.0 23.557917957382898 0.0 23 9.387027128508401E-4 0.0 0.0 24.204684126537124 0.0 24 9.387027128508401E-4 0.0 0.0 24.69867642917488 0.0 25 9.387027128508401E-4 0.0 0.0 25.12719421759129 0.0 26 9.387027128508401E-4 0.0 0.0 25.518163897493665 0.0 27 9.387027128508401E-4 0.0 0.0 26.010982821740356 0.0 28 9.387027128508401E-4 0.0 0.0 26.424716042429363 0.0 29 9.387027128508401E-4 0.0 0.0 26.82366469539097 0.0 30 0.0014080540692762602 0.0 0.0 27.319534403454426 0.0 31 0.0014080540692762602 0.0 0.0 27.75626584060828 0.0 32 0.0014080540692762602 0.0 0.0 28.199098845395664 0.0 33 0.0014080540692762602 0.0 0.0 28.621749741856753 0.0 34 0.0014080540692762602 0.0 0.0 29.02421852999155 0.0 35 0.0014080540692762602 0.0 0.0 29.458133859006853 0.0 36 0.0014080540692762602 0.0 0.0 29.89674270158641 0.0 37 0.0014080540692762602 0.0 0.0 30.364216652586126 0.0 38 0.0014080540692762602 0.0 0.0 30.786867549047216 0.0 39 0.0014080540692762602 0.0 0.0 31.20975312118652 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 60 0.0 45.000004 6 CGAACGC 60 0.0 45.000004 34 AATACGG 30 2.1622745E-6 45.000004 2 AACCGAT 25 3.8866594E-5 45.0 16 AGTCATT 20 7.028285E-4 45.0 40 GGTAAGT 25 3.8866594E-5 45.0 8 GAATGCG 20 7.028285E-4 45.0 1 CGTGCAT 20 7.028285E-4 45.0 38 TAGGTCG 20 7.028285E-4 45.0 1 CCGTGCA 20 7.028285E-4 45.0 37 TCGGATC 20 7.028285E-4 45.0 38 CCGTAAG 20 7.028285E-4 45.0 42 TTCGGAT 25 3.8866594E-5 45.0 37 ATAACGG 20 7.028285E-4 45.0 2 TGTCGCG 20 7.028285E-4 45.0 1 CCCATAC 25 3.8866594E-5 45.0 16 ATCGACG 25 3.8866594E-5 45.0 1 ATTTCCG 80 0.0 45.0 32 CGAATGC 255 0.0 44.11765 45 CGATGAA 1405 0.0 43.55872 19 >>END_MODULE