##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935936.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 445013 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.10494974304122 33.0 31.0 34.0 30.0 34.0 2 32.223905818481704 33.0 31.0 34.0 30.0 34.0 3 32.28619838072146 34.0 31.0 34.0 30.0 34.0 4 35.845413504774015 37.0 35.0 37.0 35.0 37.0 5 35.879513632186026 37.0 35.0 37.0 35.0 37.0 6 35.91071496787734 37.0 35.0 37.0 35.0 37.0 7 36.051717590272645 37.0 35.0 37.0 35.0 37.0 8 35.72310921253986 37.0 35.0 37.0 35.0 37.0 9 37.48493190086582 39.0 37.0 39.0 35.0 39.0 10 37.26461698871719 39.0 37.0 39.0 34.0 39.0 11 37.258601434115405 39.0 37.0 39.0 34.0 39.0 12 37.10839458622557 39.0 37.0 39.0 34.0 39.0 13 37.064499239348066 39.0 37.0 39.0 33.0 39.0 14 38.22688550671553 40.0 37.0 41.0 34.0 41.0 15 38.353466078519055 40.0 37.0 41.0 34.0 41.0 16 38.44963630275969 40.0 38.0 41.0 34.0 41.0 17 38.380806852833516 40.0 37.0 41.0 34.0 41.0 18 38.38949873374486 40.0 37.0 41.0 34.0 41.0 19 38.39470307608991 40.0 37.0 41.0 34.0 41.0 20 38.26028003676297 40.0 37.0 41.0 34.0 41.0 21 38.24984663369385 40.0 37.0 41.0 34.0 41.0 22 38.24432994092307 40.0 37.0 41.0 34.0 41.0 23 38.263787799457546 40.0 37.0 41.0 34.0 41.0 24 38.18608669859083 40.0 37.0 41.0 34.0 41.0 25 38.10806425879694 40.0 36.0 41.0 34.0 41.0 26 37.93288061247649 40.0 36.0 41.0 34.0 41.0 27 37.90182084568316 40.0 36.0 41.0 34.0 41.0 28 37.894832285798394 40.0 36.0 41.0 34.0 41.0 29 37.902836546348084 40.0 36.0 41.0 34.0 41.0 30 37.81242345729226 40.0 36.0 41.0 33.0 41.0 31 37.84045409909373 40.0 36.0 41.0 34.0 41.0 32 37.73879190046134 40.0 36.0 41.0 33.0 41.0 33 37.70179298132864 40.0 36.0 41.0 33.0 41.0 34 37.61678872302607 40.0 36.0 41.0 33.0 41.0 35 37.606609245123174 40.0 36.0 41.0 33.0 41.0 36 37.56595874727255 40.0 36.0 41.0 33.0 41.0 37 37.49160361607414 40.0 35.0 41.0 33.0 41.0 38 37.43906807216868 40.0 35.0 41.0 33.0 41.0 39 37.361108551885 40.0 35.0 41.0 33.0 41.0 40 37.244199607651915 39.0 35.0 41.0 32.0 41.0 41 37.19142811558314 39.0 35.0 41.0 32.0 41.0 42 37.180987971137924 39.0 35.0 41.0 32.0 41.0 43 37.090269273032476 39.0 35.0 41.0 32.0 41.0 44 37.021484765613586 39.0 35.0 41.0 32.0 41.0 45 36.93099302716999 39.0 35.0 41.0 32.0 41.0 46 36.881284366973546 39.0 35.0 41.0 32.0 41.0 47 36.82966115596623 39.0 35.0 41.0 32.0 41.0 48 36.79428466134697 39.0 35.0 41.0 32.0 41.0 49 36.74307716853215 39.0 35.0 41.0 32.0 41.0 50 36.62140431852553 39.0 35.0 41.0 31.0 41.0 51 35.714280256981255 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 8.0 10 12.0 11 5.0 12 13.0 13 9.0 14 8.0 15 15.0 16 25.0 17 39.0 18 66.0 19 136.0 20 240.0 21 421.0 22 680.0 23 971.0 24 1415.0 25 1953.0 26 2583.0 27 3114.0 28 3714.0 29 4470.0 30 5755.0 31 7363.0 32 9751.0 33 13790.0 34 27897.0 35 36954.0 36 30611.0 37 46129.0 38 85852.0 39 160862.0 40 145.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.40432077265159 22.12317392975037 22.795064413848586 10.677440883749464 2 31.587391829002748 25.17656787554521 24.33794068937312 18.898099606078926 3 33.322397323224266 25.188702352515545 24.750512906364534 16.738387417895655 4 29.014657998755094 25.468244747906244 25.44307694381962 20.074020309519046 5 26.641693613445 29.864520811751564 23.543806585425596 19.94997898937784 6 26.788880324844445 35.3018900571444 22.8568603613827 15.05236925662846 7 78.77859747917476 6.743173794922845 9.315458200097524 5.162770525804864 8 78.29411725050728 6.884742692910095 8.949401478159064 5.871738578423551 9 72.17497016941078 8.273690880940556 11.25562624013231 8.295712709516351 10 40.0804021455553 28.556469136856677 17.51813991950797 13.844988798080058 11 33.07948307128106 25.270722428333553 22.32519050005281 19.324604000332574 12 31.406273524593665 21.346567403648883 27.018311824598385 20.22884724715907 13 27.417401289400534 24.255695901018623 27.57896960313519 20.747933206445655 14 19.805938253489224 29.615314608786708 27.212238743587264 23.3665083941368 15 19.60414639572327 26.569785601768935 33.79204652448355 20.03402147802424 16 22.92225170950062 25.632284899542263 31.14695525748686 20.298508133470257 17 21.375555320855796 26.194290953297994 27.29493295701474 25.135220768831473 18 23.2678595906187 27.05359169282695 27.99378894549148 21.68475977106287 19 25.03477426502147 28.645005876232833 25.172073624815454 21.148146233930245 20 28.684105857581688 26.236312197621192 26.603492482242093 18.476089462555027 21 25.66846361791678 27.345942702797448 26.147775458245043 20.83781822104073 22 23.09820162557049 25.527119432466016 26.758094707345627 24.616584234617864 23 23.915481120776246 26.75719585719968 27.627507511016532 21.699815511007543 24 24.60062964452724 24.156148247354572 27.109769826948877 24.133452281169316 25 22.60900243363677 27.230665171579254 25.413414889003246 24.74691750578073 26 21.433980580342595 27.86075912389076 28.03288892684034 22.6723713689263 27 23.285611881001227 27.484815050346846 27.192688752912836 22.03688431573909 28 19.347974104127292 28.71511618761699 27.908398181626154 24.028511526629558 29 22.174857813142538 26.620795347551645 28.1870417268709 23.01730511243492 30 22.118454966484123 25.292968969445834 28.79061959987686 23.79795646419318 31 22.548105336248604 26.67405221869923 24.75163646904697 26.026205976005194 32 23.63301746241121 28.029967663866 25.439930968308794 22.897083905413997 33 23.01011431126731 26.544842510218803 25.158366160089706 25.286677018424182 34 20.858941199470575 25.942837624968256 27.88098325217466 25.31723792338651 35 19.808185378854102 25.693181996930427 27.598070168736644 26.900562455478827 36 21.015116412329526 28.35018302836097 25.884637078017946 24.750063481291555 37 21.691725859693985 27.55065582353774 26.34979202854748 24.407826288220793 38 20.993993433899682 27.332235238071696 23.799978877021573 27.873792451007052 39 23.968063854314366 24.273897616474123 24.95657430232375 26.801464226887756 40 22.72135870188062 21.804082127937836 28.8811787520814 26.593380418100143 41 19.248426450463242 25.034100127412007 27.34167316460418 28.375800257520567 42 22.54181338522695 24.382209059061196 27.59537361829879 25.480603937413065 43 23.156402172520803 24.730288778080638 26.87134982573543 25.24195922366313 44 21.697793098179154 24.90915995712485 26.1722691247222 27.220777819973797 45 22.031715927399873 23.253028563210513 26.121484091475978 28.593771417913633 46 21.740039055038842 24.831184706963615 26.246648974299625 27.182127263697915 47 20.076941572493386 24.258167738919987 29.63621287468007 26.028677813906558 48 20.961634828645455 22.458894459262986 28.77556385993218 27.803906852159376 49 21.58296499203394 22.313954873228422 30.193724677706047 25.90935545703159 50 19.35920973095168 23.175727450658744 28.836460957320348 28.628601861069225 51 18.96281681658738 22.032390065009334 27.054041117899924 31.950752000503357 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 253.0 1 485.0 2 717.0 3 1037.0 4 1357.0 5 991.5 6 626.0 7 617.0 8 608.0 9 632.0 10 656.0 11 645.5 12 635.0 13 655.0 14 675.0 15 697.5 16 720.0 17 797.0 18 874.0 19 835.5 20 797.0 21 862.5 22 928.0 23 1201.0 24 1474.0 25 1763.5 26 2606.0 27 3159.0 28 3837.0 29 4515.0 30 5513.5 31 6512.0 32 7235.0 33 7958.0 34 8760.5 35 9563.0 36 10219.5 37 10876.0 38 12166.0 39 13456.0 40 15432.0 41 17408.0 42 19105.5 43 20803.0 44 23075.5 45 25348.0 46 27640.0 47 29932.0 48 34807.5 49 39683.0 50 43998.0 51 48313.0 52 48316.5 53 48320.0 54 41157.0 55 33994.0 56 29399.0 57 24804.0 58 23676.5 59 22549.0 60 21988.0 61 21427.0 62 19378.0 63 17329.0 64 14266.0 65 11203.0 66 8786.0 67 6369.0 68 5022.5 69 3676.0 70 2921.0 71 2166.0 72 1815.0 73 1464.0 74 1285.5 75 738.0 76 369.0 77 256.5 78 144.0 79 127.5 80 111.0 81 83.0 82 55.0 83 35.0 84 15.0 85 9.5 86 4.0 87 4.5 88 5.0 89 3.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 445013.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.573827705951285 #Duplication Level Percentage of deduplicated Percentage of total 1 69.59761866610275 21.974632205080276 2 12.16071574721232 7.67920687567061 3 4.444200973088281 4.209613074447313 4 2.286122188279233 2.887265123499233 5 1.3488811811238817 2.129467100430275 6 0.9404555947174196 1.7816269747623454 7 0.7474507039633662 1.6519915821941926 8 0.6477486891017856 1.6361524405164467 9 0.523246212014086 1.486879717133197 >10 7.126775008823472 47.1194298242014 >50 0.1135448602463299 2.4221749680253977 >100 0.05820970683514381 3.280090055060904 >500 0.0014372767119788593 0.33399920870570354 >1k 0.0035931917799471485 1.407470850272744 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC 1735 0.38987625080615623 No Hit CCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC 1186 0.26650906827440995 No Hit CTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGCT 1125 0.2528016035486604 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGC 1106 0.2485320653553941 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCG 1051 0.2361728758485707 No Hit GAATCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTC 935 0.21010622161599773 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 537 0.12067063209389389 No Hit TCTGTCTCTTATACACATCTGACGCTTCACCCGTCGTATGCCGTCTTCTGC 491 0.11033385541545979 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.494250729753962E-4 0.0 0.0 0.2615653924716806 0.0 2 4.494250729753962E-4 0.0 0.0 1.1534494497913543 0.0 3 4.494250729753962E-4 0.0 0.0 1.5990544096464598 0.0 4 4.494250729753962E-4 0.0 0.0 2.238136863417473 0.0 5 4.494250729753962E-4 0.0 0.0 4.0338147424906685 0.0 6 4.494250729753962E-4 0.0 0.0 4.866599402714078 0.0 7 4.494250729753962E-4 0.0 0.0 5.755562197059412 0.0 8 4.494250729753962E-4 0.0 0.0 7.199340243992872 0.0 9 6.741376094630944E-4 0.0 0.0 7.688539435926591 0.0 10 6.741376094630944E-4 0.0 0.0 9.115014617550498 0.0 11 6.741376094630944E-4 0.0 0.0 10.833391384071925 0.0 12 6.741376094630944E-4 0.0 0.0 12.484579102183531 0.0 13 6.741376094630944E-4 0.0 0.0 13.067708134369107 0.0 14 6.741376094630944E-4 0.0 0.0 13.29781377173251 0.0 15 8.988501459507924E-4 0.0 0.0 13.809259504778511 0.0 16 8.988501459507924E-4 0.0 0.0 14.709682638484718 0.0 17 8.988501459507924E-4 0.0 0.0 15.751449957641688 0.0 18 8.988501459507924E-4 0.0 0.0 16.89523676836407 0.0 19 8.988501459507924E-4 0.0 0.0 17.626001937022064 0.0 20 8.988501459507924E-4 0.0 0.0 18.295420583218917 0.0 21 8.988501459507924E-4 0.0 0.0 19.1232615676396 0.0 22 8.988501459507924E-4 0.0 0.0 20.052897331089206 0.0 23 8.988501459507924E-4 0.0 0.0 20.911973358081674 0.0 24 8.988501459507924E-4 0.0 0.0 21.534651796689086 0.0 25 8.988501459507924E-4 0.0 0.0 22.111713590389495 0.0 26 8.988501459507924E-4 0.0 0.0 22.650349540350508 0.0 27 8.988501459507924E-4 0.0 0.0 23.195951578942637 0.0 28 0.0011235626824384905 0.0 0.0 23.770316822205196 0.0 29 0.0011235626824384905 0.0 0.0 24.333446438643364 0.0 30 0.0011235626824384905 0.0 0.0 25.012078298836215 0.0 31 0.0011235626824384905 0.0 0.0 25.614083184086756 0.0 32 0.0011235626824384905 0.0 0.0 26.223278870504906 0.0 33 0.0011235626824384905 0.0 0.0 26.809329165664824 0.0 34 0.0011235626824384905 0.0 0.0 27.33875190162984 0.0 35 0.0011235626824384905 0.0 0.0 27.937610811369556 0.0 36 0.0011235626824384905 0.0 0.0 28.56972717650945 0.0 37 0.0011235626824384905 0.0 0.0 29.219371119495385 0.0 38 0.0011235626824384905 0.0 0.0 29.866318512043467 0.0 39 0.0011235626824384905 0.0 0.0 30.495963039282 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACAGCG 30 2.1624928E-6 45.000004 1 TATCAAC 20 7.0286234E-4 45.0 26 GCGAAAG 25 3.8869395E-5 45.0 1 TAGCGCG 20 7.0286234E-4 45.0 1 GGATCGA 25 3.8869395E-5 45.0 8 TTCGTAC 35 1.2096825E-7 45.0 33 ATCACCC 40 6.7993824E-9 45.0 36 TCTAGCG 35 1.2096825E-7 45.0 1 CGTACAT 35 1.2096825E-7 45.0 35 TCGTAAG 25 3.8869395E-5 45.0 1 CGCACGG 80 0.0 45.0 2 ATTATCG 25 3.8869395E-5 45.0 30 CCACGTT 20 7.0286234E-4 45.0 43 AATCGAT 20 7.0286234E-4 45.0 40 CACAACG 210 0.0 42.857143 12 TAGGGTC 85 0.0 42.352943 5 ACAACGA 220 0.0 41.93182 13 AAACGGG 70 0.0 41.785713 3 CGTAAGG 60 3.6379788E-12 41.250004 2 AGCGACT 200 0.0 40.5 19 >>END_MODULE