##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935930.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 537337 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.197806962855715 33.0 31.0 34.0 30.0 34.0 2 32.318338398435245 34.0 31.0 34.0 30.0 34.0 3 32.36184740674847 34.0 31.0 34.0 30.0 34.0 4 35.895339423862495 37.0 35.0 37.0 35.0 37.0 5 35.90866997805846 37.0 35.0 37.0 35.0 37.0 6 35.9245873632376 37.0 35.0 37.0 35.0 37.0 7 36.07433696172048 37.0 35.0 37.0 35.0 37.0 8 35.78863357632175 37.0 35.0 37.0 35.0 37.0 9 37.53231584647995 39.0 37.0 39.0 35.0 39.0 10 37.260821421193775 39.0 37.0 39.0 34.0 39.0 11 37.19840993640862 39.0 37.0 39.0 34.0 39.0 12 37.09481386913613 39.0 37.0 39.0 34.0 39.0 13 37.09026365204704 39.0 37.0 39.0 33.0 39.0 14 38.28068232785012 40.0 37.0 41.0 34.0 41.0 15 38.43026629470891 40.0 38.0 41.0 34.0 41.0 16 38.51096239417721 40.0 38.0 41.0 34.0 41.0 17 38.44629161959813 40.0 38.0 41.0 34.0 41.0 18 38.44176745692182 40.0 38.0 41.0 34.0 41.0 19 38.451988230849544 40.0 37.0 41.0 34.0 41.0 20 38.32770495982968 40.0 37.0 41.0 34.0 41.0 21 38.31636012409344 40.0 37.0 41.0 34.0 41.0 22 38.29291859670933 40.0 37.0 41.0 34.0 41.0 23 38.28755324870612 40.0 37.0 41.0 34.0 41.0 24 38.205265969028744 40.0 37.0 41.0 34.0 41.0 25 38.13426583317359 40.0 37.0 41.0 34.0 41.0 26 37.97864468666777 40.0 36.0 41.0 34.0 41.0 27 37.94550161258205 40.0 36.0 41.0 34.0 41.0 28 37.93464250554121 40.0 36.0 41.0 34.0 41.0 29 37.902256870455595 40.0 36.0 41.0 34.0 41.0 30 37.790314085946065 40.0 36.0 41.0 33.0 41.0 31 37.81046903526092 40.0 36.0 41.0 33.0 41.0 32 37.74876101962084 40.0 36.0 41.0 33.0 41.0 33 37.68167276774166 40.0 36.0 41.0 33.0 41.0 34 37.6031280183572 40.0 36.0 41.0 33.0 41.0 35 37.613002640800836 40.0 36.0 41.0 33.0 41.0 36 37.522711073311534 40.0 35.0 41.0 33.0 41.0 37 37.514403437693666 40.0 35.0 41.0 33.0 41.0 38 37.422375529695515 40.0 35.0 41.0 33.0 41.0 39 37.36234430162077 40.0 35.0 41.0 33.0 41.0 40 37.26778911558296 40.0 35.0 41.0 33.0 41.0 41 37.20487329180756 39.0 35.0 41.0 33.0 41.0 42 37.20162021226902 39.0 35.0 41.0 33.0 41.0 43 37.14301453277924 39.0 35.0 41.0 32.0 41.0 44 37.04946616369243 39.0 35.0 41.0 32.0 41.0 45 36.92360287864041 39.0 35.0 41.0 32.0 41.0 46 36.838907426810366 39.0 35.0 41.0 31.0 41.0 47 36.777755858986076 39.0 35.0 41.0 31.0 41.0 48 36.72146716120424 39.0 35.0 41.0 31.0 41.0 49 36.64912150103194 39.0 35.0 41.0 31.0 41.0 50 36.527123574218784 39.0 35.0 41.0 31.0 41.0 51 35.54474007931708 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 8.0 10 17.0 11 18.0 12 12.0 13 17.0 14 25.0 15 25.0 16 47.0 17 70.0 18 116.0 19 195.0 20 341.0 21 518.0 22 774.0 23 1240.0 24 1623.0 25 2340.0 26 3012.0 27 3934.0 28 4658.0 29 5493.0 30 6829.0 31 8835.0 32 11584.0 33 16569.0 34 33288.0 35 42593.0 36 36910.0 37 55754.0 38 104159.0 39 196138.0 40 189.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.93916108512907 21.873796146552348 24.483145586475526 10.703897181843052 2 31.782103223861373 25.526810921265426 24.35808440513123 18.333001449741968 3 32.80008635176807 24.385813744447155 25.636983866735402 17.177116037049377 4 30.706800387838545 25.276874661525262 24.730104199040824 19.28622075159537 5 26.53139463688523 30.4473728777285 22.6195106609074 20.401721824478866 6 26.41303316168438 34.928545772950685 23.34493995388369 15.31348111148125 7 80.16961422719821 6.5487766522685025 8.30484407364466 4.976765046888638 8 80.79063976610581 6.413479808760609 7.544241323415286 5.251639101718288 9 74.54539702272504 8.587534452308327 9.653904346806566 7.213164178160075 10 42.308085987006294 26.24740153758256 16.938345954214952 14.506166521196196 11 31.555429832674843 26.24516830220141 23.23551142020743 18.963890444916316 12 30.33180294675408 22.449226463094853 27.087656349739547 20.13131424041151 13 26.061856897998837 23.4938223126269 28.523254493920945 21.92106629545332 14 20.20314997850511 27.34540893331373 29.070397162302243 23.381043925878917 15 20.639375289622713 26.994232669628186 31.808902048435154 20.557489992313947 16 23.679180849262195 25.744179165030513 30.0958244081461 20.480815577561195 17 22.417216755965065 26.05701822133968 27.887154616190585 23.63861040650467 18 23.140040607663348 26.566940300035174 28.399496033215655 21.893523059085826 19 24.544931765353958 27.964015133891767 26.001745645656264 21.48930745509801 20 27.478472541440475 26.70279545238835 26.376743086740724 19.44198891943045 21 25.042198843556278 27.80061674517109 26.863402296882587 20.293782114390037 22 23.19773252167634 25.43320113820563 27.05769377504248 24.311372565075548 23 23.771674014631415 26.007142631160708 27.52592879328987 22.695254560918006 24 24.080977114920433 25.09058561014782 27.92214197049524 22.906295304436508 25 23.32986561506094 26.47388882582067 25.84597747782118 24.350268081297212 26 22.441782345157694 27.80526931888182 26.31197926068743 23.44096907527306 27 23.43557208976862 27.358250036755333 26.435179412547434 22.770998460928617 28 20.81766191421771 28.910348626653292 27.389329229142977 22.882660229986023 29 24.19021954564826 26.36241315971169 27.10235848266544 22.34500881197461 30 24.901691117492376 25.846721889614898 27.056577157351903 22.195009835540823 31 24.607648458974534 27.544539088132776 25.082583183365376 22.765229269527318 32 26.523578313051217 27.160236499626862 24.847162953602677 21.469022233719247 33 25.286179808946713 26.89373707747652 25.950009025992998 21.870074087583767 34 23.255238332740905 26.30379073095655 28.15123470001135 22.28973623629119 35 24.489100880825255 25.83257806553429 26.80645479466331 22.871866258977143 36 23.43315275143904 28.822880240891656 25.7274298996719 22.0165371079974 37 24.029240495257167 28.67288126445787 26.547957799295414 20.74992044098955 38 22.95319324744062 28.71642935439026 25.176937378218884 23.153440019950235 39 24.555539633414412 24.68599780026315 27.235422090792184 23.523040475530255 40 23.73259239546132 24.376322494077275 29.519835782758307 22.3712493277031 41 20.932115227501548 27.279156283673 27.772887405855172 24.015841082970276 42 22.315790649071253 26.53325566636952 26.72252236492183 24.428431319637397 43 23.74822504312936 24.982645900058994 26.737038394899294 24.532090661912356 44 22.517340142219876 25.832205859637437 26.12829565058799 25.5221583475547 45 23.756041366963377 24.881591999062042 26.698701187522918 24.66366544645167 46 23.110450238863134 27.100869659078008 26.781889205470684 23.006790896588175 47 21.99252982765006 25.491451361063916 29.16661238664004 23.349406424645984 48 22.511943156715432 24.584757796317767 28.90178789102556 24.001511155941245 49 22.705676326030034 24.42582587835939 29.151910253714146 23.716587541896423 50 20.853951989161366 24.449460952809876 29.1266002527278 25.569986805300953 51 20.723493822312626 24.01677159771242 28.390563091691064 26.86917148828389 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 248.0 1 591.5 2 935.0 3 1317.0 4 1699.0 5 1236.5 6 774.0 7 785.5 8 797.0 9 795.0 10 793.0 11 768.0 12 743.0 13 752.0 14 761.0 15 769.0 16 777.0 17 809.0 18 841.0 19 936.0 20 1031.0 21 1173.5 22 1316.0 23 1606.0 24 1896.0 25 2330.5 26 3707.5 27 4650.0 28 5366.5 29 6083.0 30 7236.0 31 8389.0 32 9685.5 33 10982.0 34 12821.5 35 14661.0 36 15046.5 37 15432.0 38 17416.0 39 19400.0 40 21840.0 41 24280.0 42 25739.0 43 27198.0 44 30792.5 45 34387.0 46 39452.0 47 44517.0 48 47139.0 49 49761.0 50 49276.5 51 48792.0 52 43571.0 53 38350.0 54 34790.5 55 31231.0 56 29511.5 57 27792.0 58 27507.0 59 27222.0 60 26741.0 61 26260.0 62 24502.0 63 22744.0 64 18678.5 65 14613.0 66 11694.0 67 8775.0 68 7389.5 69 6004.0 70 5054.5 71 4105.0 72 3403.5 73 2702.0 74 2249.5 75 1367.0 76 937.0 77 675.0 78 413.0 79 344.5 80 276.0 81 171.0 82 66.0 83 65.5 84 65.0 85 48.5 86 32.0 87 32.5 88 33.0 89 19.0 90 5.0 91 4.0 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 537337.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.52683212923902 #Duplication Level Percentage of deduplicated Percentage of total 1 70.86901150875545 21.634064174928856 2 10.366947920978427 6.329401577525437 3 3.61676941634729 3.3122553846899847 4 1.887765220008961 2.3050996788251803 5 1.2339127719488259 1.8833724025702894 6 0.9970993250349336 1.8262970226911368 7 0.8646839166478506 1.8477242537853285 8 0.7426237171230444 1.8135959638245325 9 0.7060360743641327 1.9397740247370718 >10 8.565938524794332 51.57865936159601 >50 0.10050203079118977 2.0960333755452676 >100 0.043160381321369845 2.215930399631325 >500 0.004932615008156554 0.991550271405574 >1k 6.165768760195692E-4 0.22624210824402047 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 1202 0.2236957440116724 No Hit CCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGC 974 0.18126427176985765 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 731 0.13604125530160774 No Hit CTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTCTGCT 730 0.13585515235317874 TruSeq Adapter, Index 27 (95% over 23bp) GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 639 0.11891978404613864 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 578 0.10756750419196892 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 578 0.10756750419196892 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.14255485849662317 0.0 2 0.0 0.0 0.0 0.7014220126289461 0.0 3 0.0 0.0 0.0 1.0023504802386585 0.0 4 0.0 0.0 0.0 1.4285262321410959 0.0 5 0.0 0.0 0.0 2.71803356180572 0.0 6 0.0 0.0 0.0 3.424666456990678 0.0 7 0.0 0.0 0.0 4.097428615561556 0.0 8 0.0 0.0 0.0 5.150585200721335 0.0 9 0.0 0.0 0.0 5.5414013924222605 0.0 10 0.0 0.0 0.0 6.481035179040341 0.0 11 0.0 0.0 0.0 7.779847656126416 0.0 12 0.0 0.0 0.0 8.799505710568972 0.0 13 0.0 0.0 0.0 9.22549535952298 0.0 14 1.8610294842901195E-4 0.0 0.0 9.406945734241267 0.0 15 1.8610294842901195E-4 0.0 0.0 9.756447071390951 0.0 16 1.8610294842901195E-4 0.0 0.0 10.410785038067358 0.0 17 1.8610294842901195E-4 0.0 0.0 11.185531612377336 0.0 18 1.8610294842901195E-4 0.0 0.0 12.001406938290124 0.0 19 1.8610294842901195E-4 0.0 0.0 12.55208556269157 0.0 20 1.8610294842901195E-4 0.0 0.0 13.079873524436248 0.0 21 1.8610294842901195E-4 0.0 0.0 13.731792152783077 0.0 22 1.8610294842901195E-4 0.0 0.0 14.429678209391872 0.0 23 1.8610294842901195E-4 0.0 0.0 15.097043382458308 0.0 24 1.8610294842901195E-4 0.0 0.0 15.632833770985433 0.0 25 1.8610294842901195E-4 0.0 0.0 16.112793274983854 0.0 26 1.8610294842901195E-4 0.0 0.0 16.536921894453574 0.0 27 1.8610294842901195E-4 0.0 0.0 16.95397860188299 0.0 28 1.8610294842901195E-4 0.0 0.0 17.405278251823344 0.0 29 1.8610294842901195E-4 0.0 0.0 17.86699966687572 0.0 30 1.8610294842901195E-4 0.0 0.0 18.41321182051487 0.0 31 1.8610294842901195E-4 0.0 0.0 18.884238382988702 0.0 32 1.8610294842901195E-4 0.0 0.0 19.35582325430782 0.0 33 1.8610294842901195E-4 0.0 0.0 19.81903349294763 0.0 34 1.8610294842901195E-4 0.0 0.0 20.266424980970974 0.0 35 3.722058968580239E-4 0.0 0.0 20.748059411505256 0.0 36 3.722058968580239E-4 0.0 0.0 21.228577224348964 0.0 37 3.722058968580239E-4 0.0 0.0 21.71318930205811 0.0 38 3.722058968580239E-4 0.0 0.0 22.219761527681882 0.0 39 3.722058968580239E-4 0.0 0.0 22.70642073782375 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGCG 20 7.0299284E-4 45.000004 1 CGCATGG 50 2.1827873E-11 45.000004 2 AATTGCG 20 7.0299284E-4 45.000004 1 CGCTAGT 45 3.8380676E-10 45.000004 4 ACTACGG 25 3.8880222E-5 45.000004 2 CGTAAGG 45 3.8380676E-10 45.000004 2 ACGTATT 45 3.8380676E-10 45.000004 26 GCGCTAG 25 3.8880222E-5 45.000004 1 TCGACGT 25 3.8880222E-5 45.000004 26 ATGCACG 20 7.0299284E-4 45.000004 1 ACGCTAG 30 2.163335E-6 44.999996 1 TCCGCTA 55 6.002665E-11 40.909092 2 TAACGGG 160 0.0 40.781254 3 TTAACGG 45 1.9250365E-8 40.000004 2 GCGTTAG 40 3.4536424E-7 39.375004 1 TAGGGCG 80 0.0 39.375004 5 ACGGTCT 40 3.4536424E-7 39.375004 30 TAAGGGA 275 0.0 39.272728 4 CGAATAT 155 0.0 39.193546 14 GCTACGA 155 0.0 39.193546 10 >>END_MODULE