##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935925.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 227223 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.04407564375085 33.0 31.0 34.0 30.0 34.0 2 32.17178718703652 33.0 31.0 34.0 30.0 34.0 3 32.22936498505873 34.0 31.0 34.0 30.0 34.0 4 35.79319875188691 37.0 35.0 37.0 35.0 37.0 5 35.821488141605386 37.0 35.0 37.0 35.0 37.0 6 35.84339173411142 37.0 35.0 37.0 35.0 37.0 7 35.9918978272446 37.0 35.0 37.0 35.0 37.0 8 35.61793040317222 37.0 35.0 37.0 33.0 37.0 9 37.405751178357825 39.0 37.0 39.0 34.0 39.0 10 37.15876033676168 39.0 37.0 39.0 34.0 39.0 11 37.147397050474645 39.0 37.0 39.0 34.0 39.0 12 37.081840306659096 39.0 37.0 39.0 34.0 39.0 13 37.028975939935656 39.0 37.0 39.0 33.0 39.0 14 38.191411080744466 40.0 37.0 41.0 33.0 41.0 15 38.324676639248665 40.0 37.0 41.0 34.0 41.0 16 38.45044295691898 40.0 38.0 41.0 34.0 41.0 17 38.43862637145007 40.0 38.0 41.0 34.0 41.0 18 38.446213631542584 40.0 37.0 41.0 34.0 41.0 19 38.452757863420516 40.0 37.0 41.0 34.0 41.0 20 38.284491446728545 40.0 37.0 41.0 34.0 41.0 21 38.27699220589465 40.0 37.0 41.0 34.0 41.0 22 38.2580416595151 40.0 37.0 41.0 34.0 41.0 23 38.26633307367652 40.0 37.0 41.0 34.0 41.0 24 38.19193919629615 40.0 37.0 41.0 34.0 41.0 25 38.11315755887388 40.0 37.0 41.0 34.0 41.0 26 37.98619858024936 40.0 37.0 41.0 34.0 41.0 27 37.95588474758277 40.0 36.0 41.0 34.0 41.0 28 37.93968040207197 40.0 36.0 41.0 34.0 41.0 29 37.9510568912478 40.0 36.0 41.0 34.0 41.0 30 37.856563816162975 40.0 36.0 41.0 33.0 41.0 31 37.8742204794409 40.0 36.0 41.0 33.0 41.0 32 37.82821281296348 40.0 36.0 41.0 33.0 41.0 33 37.81636542075406 40.0 36.0 41.0 33.0 41.0 34 37.78010148620518 40.0 36.0 41.0 33.0 41.0 35 37.755601325570034 40.0 36.0 41.0 33.0 41.0 36 37.71141125678298 40.0 36.0 41.0 33.0 41.0 37 37.63838167791113 40.0 36.0 41.0 33.0 41.0 38 37.56914572908553 40.0 36.0 41.0 33.0 41.0 39 37.53580403392262 40.0 36.0 41.0 33.0 41.0 40 37.45553927199271 40.0 36.0 41.0 33.0 41.0 41 37.385462739247345 40.0 35.0 41.0 33.0 41.0 42 37.376071084353256 40.0 35.0 41.0 33.0 41.0 43 37.35551418650401 40.0 35.0 41.0 33.0 41.0 44 37.26200252615272 39.0 35.0 41.0 33.0 41.0 45 37.16411630864833 39.0 35.0 41.0 32.0 41.0 46 37.10841772179753 39.0 35.0 41.0 32.0 41.0 47 37.06049563644525 39.0 35.0 41.0 32.0 41.0 48 37.04252650479925 39.0 35.0 41.0 32.0 41.0 49 37.0411710082166 39.0 35.0 41.0 32.0 41.0 50 36.93367308767158 39.0 35.0 41.0 32.0 41.0 51 35.990819591326584 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 3.0 10 6.0 11 2.0 12 5.0 13 13.0 14 6.0 15 9.0 16 21.0 17 24.0 18 37.0 19 68.0 20 121.0 21 234.0 22 318.0 23 551.0 24 722.0 25 912.0 26 1285.0 27 1519.0 28 1852.0 29 2131.0 30 2781.0 31 3592.0 32 4808.0 33 7022.0 34 13067.0 35 18482.0 36 15523.0 37 23448.0 38 43555.0 39 85024.0 40 81.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.409676837292 21.628092226579177 23.13058097111648 10.831649965012344 2 31.31593192590539 26.564212249640224 23.854979469507928 18.264876354946463 3 31.760429181905003 25.478054598346116 25.62944772316183 17.132068496587053 4 30.180483489787562 24.405099835844084 26.80978598117268 18.60463069319567 5 25.932233972793245 29.96571649876993 23.357230562046976 20.744818966389847 6 25.03707811269106 35.08051561681696 24.064465305008735 15.817940965483249 7 75.74893386673004 7.134401006940319 10.949155675261748 6.167509451067894 8 74.97392429463567 7.689362432500231 10.160943214375305 7.175770058488798 9 68.76592598460543 8.624567055271694 12.759711824947297 9.849795135175576 10 38.55199517654463 26.46563067999278 19.857584839562897 15.124789303899695 11 29.596035612592036 24.63527019711913 25.496538642655015 20.272155547633822 12 27.519661301892857 22.389458813588416 29.704739396980056 20.386140487538672 13 24.23698305189175 25.38299379904323 30.86527332180281 19.514749827262204 14 18.880130972656815 29.876817047570007 28.39237225104853 22.850679728724646 15 17.164195525981086 27.388072510265243 34.89391478855573 20.553817175197935 16 19.519590886485965 26.520642716626398 31.293046918665805 22.666719478221836 17 19.350153813654426 26.933453039525045 28.48435237629993 25.23204077052059 18 20.219343992465554 27.35858605862963 30.059457009193615 22.36261293971121 19 21.4960633386585 28.055698586850802 27.965918943064743 22.482319131425957 20 23.876104091575236 27.679856352569942 28.77745650748384 19.666583048370985 21 22.389458813588416 28.273986348212986 29.28840830373686 20.048146534461743 22 20.119882230231976 26.35736699189783 27.943474032118225 25.579276745751972 23 20.185896674192314 27.409637228625623 28.692517922921535 23.711948174260527 24 21.998213209050142 25.831892017973534 28.671833397147296 23.49806137582903 25 19.416168257614768 28.479951413369246 27.846652847643067 24.257227481372926 26 18.32737002856225 28.306113377607023 29.19642817848545 24.17008841534528 27 21.62765213028611 27.4241604062969 27.948315091341986 22.999872372075007 28 17.079256941418784 28.674914071198778 30.32967613313793 23.91615285424451 29 18.976512060838914 24.775660914608117 31.95187106938998 24.29595595516299 30 21.09161484532816 27.049198364602173 27.997605876165704 23.861580913903964 31 20.581103145368207 29.771193937233463 24.628668752723097 25.01903416467523 32 20.856163328536283 29.15417893435084 27.256483718637636 22.733174018475243 33 21.792248143893882 26.2741887925078 25.313458584738342 26.620104478859975 34 19.405165850288043 25.644410997126172 28.492274109575177 26.45814904301061 35 19.533673967864168 25.36318946585513 28.44650409509601 26.656632471184693 36 21.028240979126235 27.285970170273256 25.884703573141802 25.801085277458707 37 19.144188748498173 27.84445236617772 29.22107357089731 23.790285314426797 38 19.89763360223217 29.047675631428156 26.227978681735564 24.82671208460411 39 22.36657380634883 23.79336598847828 28.807383055412522 25.032677149760367 40 22.592343204693186 24.134000519313624 28.741368611452184 24.532287664541002 41 18.047908882463485 26.304995533022623 26.966900357798284 28.680195226715604 42 18.909617424292435 25.7091051522073 28.955695506176752 26.42558191732351 43 21.852541336044325 24.245784977753132 28.015649824181533 25.886023862021013 44 20.625992967261237 24.877763254600108 27.686457796965975 26.80978598117268 45 20.79234936604129 23.819771766062413 27.678536063690736 27.709342804205562 46 22.287796569889494 25.766317670306265 27.207633030106987 24.73825272969726 47 18.14737064469706 25.036197920104918 31.5522636352834 25.26416779991462 48 19.421009316838525 23.52358696082703 29.13217411969739 27.923229602637058 49 20.128244059800284 22.3344467769548 31.984438195077082 25.552870968167834 50 19.604529471048266 22.076990445509477 30.838867544218672 27.47961253922358 51 18.67944706301739 22.6728808263248 26.922450632198323 31.72522147845949 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 116.0 1 210.0 2 304.0 3 499.0 4 694.0 5 501.5 6 309.0 7 313.5 8 318.0 9 317.0 10 316.0 11 318.5 12 321.0 13 372.0 14 423.0 15 378.0 16 333.0 17 331.5 18 330.0 19 381.5 20 433.0 21 601.0 22 769.0 23 787.5 24 806.0 25 1158.0 26 1780.0 27 2050.0 28 2118.0 29 2186.0 30 3086.5 31 3987.0 32 4511.5 33 5036.0 34 5169.5 35 5303.0 36 5893.5 37 6484.0 38 7119.5 39 7755.0 40 8934.0 41 10113.0 42 11728.0 43 13343.0 44 15345.5 45 17348.0 46 21059.5 47 24771.0 48 26187.0 49 27603.0 50 26801.0 51 25999.0 52 21572.5 53 17146.0 54 14449.5 55 11753.0 56 10273.0 57 8793.0 58 8212.0 59 7631.0 60 7148.0 61 6665.0 62 6116.5 63 5568.0 64 4875.5 65 4183.0 66 3342.5 67 2502.0 68 2091.0 69 1680.0 70 1389.0 71 1098.0 72 846.0 73 594.0 74 445.0 75 226.0 76 156.0 77 138.5 78 121.0 79 81.5 80 42.0 81 31.5 82 21.0 83 13.5 84 6.0 85 5.0 86 4.0 87 3.0 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 227223.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.16095201630117 #Duplication Level Percentage of deduplicated Percentage of total 1 71.80220529172651 25.96436100218728 2 11.324635493999951 8.190192014012666 3 4.10388725263491 4.45201410068523 4 2.099408514470706 3.036664422175572 5 1.3338850619477642 2.4117276860177004 6 1.018669522673612 2.210163583792134 7 0.7180585643696906 1.817597690374654 8 0.6426015626901639 1.8589667419231328 9 0.5793150451524962 1.8853725195072681 >10 6.236156074288635 40.43780779234496 >50 0.0888445342355719 2.2110437763782715 >100 0.0450307913248789 2.984733059593439 >500 0.004868193656743665 1.483124507642272 >1k 0.0024340968283718327 1.0562311033654164 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 1366 0.6011715363321495 TruSeq Adapter, Index 13 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 1034 0.4550595670332669 TruSeq Adapter, Index 13 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGC 952 0.41897167100161514 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCG 849 0.37364175281551604 No Hit GAATCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTC 788 0.3467958789383117 No Hit CTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGCT 781 0.3437152048868292 TruSeq Adapter, Index 16 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 437 0.19232208007111956 TruSeq Adapter, Index 13 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCCGTCTTCTGC 346 0.15227331740184752 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 339 0.14919264335036508 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 328 0.1443515841266069 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 282 0.12410715464543642 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 280 0.12322696205929856 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCATGCACTCGTATGCC 276 0.12146657688702288 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.35559780479969016 0.0 2 0.0 0.0 0.0 1.8087957645132755 0.0 3 0.0 0.0 0.0 2.4786223225641772 0.0 4 0.0 0.0 0.0 3.411186367577226 0.0 5 0.0 0.0 0.0 5.990150644961117 0.0 6 0.0 0.0 0.0 7.132200525474974 0.0 7 0.0 0.0 0.0 8.378113131153096 0.0 8 0.0 0.0 0.0 10.24060064342078 0.0 9 0.0 0.0 0.0 10.881380846129133 0.0 10 0.0 0.0 0.0 12.674773240384996 0.0 11 0.0 0.0 0.0 14.862932009523684 0.0 12 0.0 0.0 0.0 16.956910171945623 0.0 13 0.0 0.0 0.0 17.699792714645966 0.0 14 0.0 0.0 0.0 18.02810454927538 0.0 15 0.0 0.0 0.0 18.62487512267684 0.0 16 0.0 0.0 0.0 19.74580038112339 0.0 17 0.0 0.0 0.0 21.036602808694543 0.0 18 0.0 0.0 0.0 22.381096984020104 0.0 19 0.0 0.0 0.0 23.315421414205428 0.0 20 0.0 0.0 0.0 24.111555608367112 0.0 21 0.0 0.0 0.0 25.071845719843502 0.0 22 0.0 0.0 0.0 26.10255123821092 0.0 23 0.0 0.0 0.0 27.03555537951704 0.0 24 0.0 0.0 0.0 27.78723984807876 0.0 25 0.0 0.0 0.0 28.456186213543525 0.0 26 0.0 0.0 0.0 29.081563045994464 0.0 27 0.0 0.0 0.0 29.660729767673168 0.0 28 0.0 0.0 0.0 30.279945252021143 0.0 29 0.0 0.0 0.0 30.915884395505735 0.0 30 0.0 0.0 0.0 31.597593553469498 0.0 31 0.0 0.0 0.0 32.19436412687096 0.0 32 0.0 0.0 0.0 32.79641585578925 0.0 33 0.0 0.0 0.0 33.35137728134916 0.0 34 0.0 0.0 0.0 33.90809909208135 0.0 35 0.0 0.0 0.0 34.505749858068945 0.0 36 0.0 0.0 0.0 35.09459869819516 0.0 37 0.0 0.0 0.0 35.6279954053947 0.0 38 0.0 0.0 0.0 36.165352979231855 0.0 39 0.0 0.0 0.0 36.72603565660167 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAACAT 20 7.02133E-4 45.0 11 CTATGCC 25 3.880897E-5 45.0 9 TAGCGCG 25 3.880897E-5 45.0 1 TCCTCGA 20 7.02133E-4 45.0 38 GTCTACG 20 7.02133E-4 45.0 40 TATGCCC 25 3.880897E-5 45.0 10 CAGGGTC 20 7.02133E-4 45.0 5 AGACGAT 20 7.02133E-4 45.0 18 GTAGACG 25 3.880897E-5 45.0 1 CACTAGG 25 3.880897E-5 45.0 2 CTACGCA 20 7.02133E-4 45.0 42 CTACGAT 20 7.02133E-4 45.0 22 CGAGGGC 20 7.02133E-4 45.0 4 ACCAGGT 20 7.02133E-4 45.0 3 CGAATAT 25 3.880897E-5 45.0 14 GATTGCG 20 7.02133E-4 45.0 1 TGTAGCG 25 3.880897E-5 45.0 1 GTCCCGC 25 3.880897E-5 45.0 15 GCCCGAA 25 3.880897E-5 45.0 25 CCCGCGG 25 3.880897E-5 45.0 17 >>END_MODULE