SRR2935918.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935918.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	672357
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTC	2226	0.33107411687540994	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGC	2138	0.3179858319315483	No Hit
GCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC	2029	0.3017742062624469	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCG	1843	0.27411033126746653	No Hit
CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC	1753	0.2607245853021535	No Hit
CTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGCT	1375	0.2045044522478386	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1291	0.19201108934687972	No Hit
CGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG	901	0.1340061901638564	No Hit
TCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC	716	0.10649104567960176	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTAGCG	35	1.2109194E-7	45.000004	1
TAGCACG	30	2.1641517E-6	45.000004	1
TTGCGCG	60	0.0	45.000004	1
CTCGCGG	30	2.1641517E-6	45.000004	2
GCGCGAC	40	6.8084773E-9	45.0	9
GTTTACG	25	3.8890725E-5	45.0	1
TCGATAG	45	3.8380676E-10	45.0	1
AGCGAAC	20	7.031196E-4	45.0	31
CTCGACT	20	7.031196E-4	45.0	29
CGCACGG	20	7.031196E-4	45.0	2
TCGACGG	50	2.1827873E-11	45.0	2
TAACGTC	120	0.0	41.250004	32
CGTTTTT	995	0.0	40.92965	1
TACGGTT	55	6.002665E-11	40.90909	33
CTCGTAC	50	1.0804797E-9	40.5	29
CCTCCGC	50	1.0804797E-9	40.5	45
AAACCGG	50	1.0804797E-9	40.5	2
TACGAAG	45	1.9263098E-8	40.0	1
GGCGCGA	45	1.9263098E-8	40.0	8
TAACGCG	40	3.4553705E-7	39.375	1