##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935918.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 672357 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.11196432847431 33.0 31.0 34.0 30.0 34.0 2 32.23756278286684 33.0 31.0 34.0 30.0 34.0 3 32.27959997441835 34.0 31.0 34.0 30.0 34.0 4 35.84479971205773 37.0 35.0 37.0 35.0 37.0 5 35.88623603234591 37.0 35.0 37.0 35.0 37.0 6 35.91155442718675 37.0 35.0 37.0 35.0 37.0 7 36.08936324006443 37.0 35.0 37.0 35.0 37.0 8 35.822223907834676 37.0 35.0 37.0 35.0 37.0 9 37.60026146823785 39.0 38.0 39.0 35.0 39.0 10 37.12531437911704 39.0 37.0 39.0 33.0 39.0 11 37.115722748480344 39.0 37.0 39.0 34.0 39.0 12 37.18343826270865 39.0 37.0 39.0 34.0 39.0 13 37.26729847387623 39.0 37.0 39.0 34.0 39.0 14 38.50122182114561 40.0 38.0 41.0 34.0 41.0 15 38.621846727259474 40.0 38.0 41.0 35.0 41.0 16 38.70363512241265 40.0 38.0 41.0 35.0 41.0 17 38.68309841349164 40.0 38.0 41.0 35.0 41.0 18 38.654955626252125 40.0 38.0 41.0 35.0 41.0 19 38.623046982481036 40.0 38.0 41.0 35.0 41.0 20 38.46972069897391 40.0 38.0 41.0 34.0 41.0 21 38.493548814097274 40.0 38.0 41.0 34.0 41.0 22 38.50228970621262 40.0 38.0 41.0 34.0 41.0 23 38.50650919080191 40.0 38.0 41.0 34.0 41.0 24 38.436045136735395 40.0 38.0 41.0 34.0 41.0 25 38.39667765785141 40.0 38.0 41.0 34.0 41.0 26 38.25840290202972 40.0 37.0 41.0 34.0 41.0 27 38.20094235651596 40.0 37.0 41.0 34.0 41.0 28 38.22216917500673 40.0 37.0 41.0 34.0 41.0 29 38.19777737124772 40.0 37.0 41.0 34.0 41.0 30 38.10561651027653 40.0 37.0 41.0 34.0 41.0 31 38.1398364261843 40.0 37.0 41.0 34.0 41.0 32 38.01981239133377 40.0 37.0 41.0 34.0 41.0 33 38.00715839948123 40.0 37.0 41.0 34.0 41.0 34 37.94622945845734 40.0 37.0 41.0 34.0 41.0 35 37.91349982226704 40.0 37.0 41.0 34.0 41.0 36 37.86022752793531 40.0 37.0 41.0 33.0 41.0 37 37.795630892516925 40.0 37.0 41.0 33.0 41.0 38 37.71025214283483 40.0 37.0 41.0 33.0 41.0 39 37.66465731746676 40.0 37.0 41.0 33.0 41.0 40 37.650472888658854 40.0 37.0 41.0 33.0 41.0 41 37.60454936886208 40.0 37.0 41.0 33.0 41.0 42 37.60333275328434 40.0 37.0 41.0 33.0 41.0 43 37.51395910208416 40.0 36.0 41.0 33.0 41.0 44 37.449966312539324 40.0 36.0 41.0 33.0 41.0 45 37.35782776114475 40.0 36.0 41.0 33.0 41.0 46 37.29652996845426 40.0 36.0 41.0 32.0 41.0 47 37.25914506727825 40.0 36.0 41.0 32.0 41.0 48 37.218714165242574 39.0 36.0 41.0 32.0 41.0 49 37.17799175140588 39.0 36.0 41.0 32.0 41.0 50 37.05739361678394 39.0 35.0 41.0 32.0 41.0 51 36.062872848799074 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 6.0 8 6.0 9 9.0 10 12.0 11 8.0 12 10.0 13 10.0 14 7.0 15 8.0 16 31.0 17 56.0 18 106.0 19 176.0 20 348.0 21 692.0 22 1039.0 23 1525.0 24 2097.0 25 2925.0 26 3853.0 27 4513.0 28 5065.0 29 5962.0 30 7366.0 31 9924.0 32 12987.0 33 18204.0 34 32258.0 35 43141.0 36 44737.0 37 69449.0 38 138515.0 39 267071.0 40 241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.861625594736125 22.565393087303324 26.21419870693694 10.358782611023608 2 31.38020426648343 25.587448334738838 25.5739138582628 17.458433540514935 3 30.59133763759431 25.44957515129611 27.45163655617477 16.507450654934804 4 27.701652544704675 25.62834922518841 28.060390536575063 18.60960769353186 5 26.320243561084368 29.685568827274793 25.202087581448545 18.792100030192294 6 25.352900319324405 34.62505781898604 25.18022419637187 14.84181766531768 7 80.36251574684282 5.590036245625464 9.354554202603676 4.692893804928037 8 81.4196922170811 5.563413484205563 8.000214171935445 5.016680126777887 9 75.95548198352958 6.959844249409168 9.914227114464488 7.17044665259676 10 37.54850473781042 28.022910447872185 19.18950795485137 15.239076859466028 11 25.874646950950165 25.723834213074305 27.41028947419303 20.991229361782505 12 23.24181945008381 22.48359130640419 32.028371832226036 22.24621741128597 13 23.579288978920424 24.172277525183794 33.09581070770439 19.152622788191394 14 19.877981489000636 28.324982115156082 30.839271398974056 20.957764996869223 15 19.509278552911624 26.67704805631532 34.023889094632764 19.789784296140294 16 22.104774695585828 26.32455674589541 30.250149845989554 21.320518712529207 17 22.1462705080783 26.625141108072054 28.831260773666372 22.397327610183282 18 22.15281465055023 25.929231048386498 30.949629437932526 20.968324863130746 19 21.258200628535135 28.663641488078508 28.768199037118674 21.309958846267683 20 22.294406096761097 27.825693790649908 30.278259912516713 19.601640200072282 21 21.671820178863314 28.534394674257875 30.54508244875862 19.248702698120194 22 20.868675420944527 24.919202150048264 29.910746820513506 24.301375608493704 23 19.89196215700885 27.103755891587355 29.981840004640393 23.0224419467634 24 20.471862418328357 26.51210591992052 30.42609804017806 22.589933621573064 25 19.74174434117589 29.643626823250145 28.034362697198066 22.580266138375894 26 19.928996054179553 27.88087281012914 30.03969617331269 22.15043496237862 27 21.619169578066412 27.921922431089435 29.3100242876924 21.14888370315175 28 19.430005190694825 26.705604314374654 31.021168813591586 22.84322168133893 29 20.232108835038527 24.267465052048244 32.39410015810053 23.106325954812696 30 23.347120651677606 26.55226315781646 29.332780055833435 20.7678361346725 31 23.613794457408787 26.218363161237257 27.737645328300292 22.43019705305366 32 22.552007341338008 26.22862556647733 29.478833417366072 21.740533674818586 33 23.93891935385517 24.925895023030918 28.296277126586023 22.838908496527885 34 22.840395801635143 24.264192980812275 29.80172735615157 23.09368386140101 35 22.024906411326125 23.71954185053476 30.257437641015116 23.998114097124 36 24.66992981407199 24.868187584869347 29.543233728510298 20.918648872548363 37 23.350392722913572 24.77225640545127 30.843882044806552 21.033468826828607 38 22.185981554442062 25.26485185697479 29.093323933565056 23.455842655018095 39 23.435020383516495 24.150860331639294 30.703182981660042 21.710936303184173 40 23.70199165026913 23.247471209491387 29.758595508041115 23.29194163219837 41 21.4518477535 24.249022468718255 29.611203571911947 24.687926205869797 42 22.214537812501394 23.574380872066477 31.018342933887798 23.192738381544327 43 22.884568763320676 23.462684258511477 31.552880389435966 22.099866588731878 44 22.453250282216146 23.72474741841016 29.38319969896945 24.438802600404248 45 23.651274546111665 22.559443866874297 29.04721747524009 24.742064111773953 46 25.244327046494647 23.901587995663018 28.76909142018303 22.084993537659308 47 21.541680981978324 23.592972185907186 32.177845995505365 22.68750083660912 48 21.87915051081494 23.324364883536575 30.821721198708424 23.974763406940063 49 23.240927067019456 21.864574920763822 32.26515080530135 22.629347206915373 50 22.353303379008473 21.733989532346655 31.48372070194852 24.42898638669635 51 21.854758707055925 21.373615504858282 29.014794223901884 27.75683156418391 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 155.0 1 326.0 2 497.0 3 1466.0 4 2435.0 5 1730.5 6 1026.0 7 1032.0 8 1038.0 9 1092.5 10 1147.0 11 1185.5 12 1224.0 13 1191.0 14 1158.0 15 1154.5 16 1151.0 17 1140.0 18 1129.0 19 1395.5 20 1662.0 21 1753.5 22 1845.0 23 2244.0 24 2643.0 25 3365.5 26 4844.5 27 5601.0 28 6524.5 29 7448.0 30 8848.5 31 10249.0 32 12171.5 33 14094.0 34 16752.5 35 19411.0 36 21727.0 37 24043.0 38 25570.5 39 27098.0 40 29348.5 41 31599.0 42 34835.5 43 38072.0 44 42109.0 45 46146.0 46 49914.5 47 53683.0 48 64293.0 49 74903.0 50 78022.0 51 81141.0 52 77507.5 53 73874.0 54 61726.0 55 49578.0 56 40914.5 57 32251.0 58 26665.5 59 21080.0 60 17864.5 61 14649.0 62 12404.0 63 10159.0 64 8232.0 65 6305.0 66 5157.0 67 4009.0 68 3313.5 69 2618.0 70 1949.5 71 1281.0 72 1070.0 73 859.0 74 761.0 75 472.5 76 282.0 77 163.0 78 44.0 79 25.0 80 6.0 81 6.5 82 7.0 83 4.5 84 2.0 85 1.0 86 0.0 87 1.0 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 672357.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.250895986794326 #Duplication Level Percentage of deduplicated Percentage of total 1 71.81547471388038 26.751907788090158 2 11.566494684453275 8.617245808447569 3 4.378883269251956 4.8935197560365555 4 2.2052758443926344 3.285940044066402 5 1.4332265794385108 2.6694487118086494 6 1.026865076653834 2.2950986497742134 7 0.7748532511169608 2.020478450367113 8 0.6284863948088593 1.8729345057712135 9 0.5618472922652601 1.883638354017171 >10 5.506250257195307 39.450621630613234 >50 0.06406487890994512 1.6319580691295794 >100 0.0338455962229952 2.3202832416427785 >500 0.0016116950582378664 0.4075017142803638 >1k 0.0028204663519162663 1.8994232759550662 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTC 2226 0.33107411687540994 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGC 2138 0.3179858319315483 No Hit GCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 2029 0.3017742062624469 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCG 1843 0.27411033126746653 No Hit CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 1753 0.2607245853021535 No Hit CTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGCT 1375 0.2045044522478386 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1291 0.19201108934687972 No Hit CGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTG 901 0.1340061901638564 No Hit TCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 716 0.10649104567960176 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.949220429028032E-4 0.0 0.0 0.2116435167626722 0.0 2 5.949220429028032E-4 0.0 0.0 0.9984279185016294 0.0 3 5.949220429028032E-4 0.0 0.0 1.4646980696267013 0.0 4 5.949220429028032E-4 0.0 0.0 2.113609287922934 0.0 5 5.949220429028032E-4 0.0 0.0 4.0140877539759385 0.0 6 5.949220429028032E-4 0.0 0.0 4.991842131486695 0.0 7 5.949220429028032E-4 0.0 0.0 5.975843190447931 0.0 8 5.949220429028032E-4 0.0 0.0 7.5437602345182695 0.0 9 5.949220429028032E-4 0.0 0.0 8.057921610097017 0.0 10 5.949220429028032E-4 0.0 0.0 9.558612463319339 0.0 11 5.949220429028032E-4 0.0 0.0 11.43112959335591 0.0 12 5.949220429028032E-4 0.0 0.0 13.232999730797776 0.0 13 5.949220429028032E-4 0.0 0.0 13.850082619798709 0.0 14 5.949220429028032E-4 0.0 0.0 14.099206225264258 0.0 15 5.949220429028032E-4 0.0 0.0 14.551495708381113 0.0 16 5.949220429028032E-4 0.0 0.0 15.482102513991823 0.0 17 5.949220429028032E-4 0.0 0.0 16.76386205542591 0.0 18 5.949220429028032E-4 0.0 0.0 18.02836885761582 0.0 19 5.949220429028032E-4 0.0 0.0 18.968494415912975 0.0 20 5.949220429028032E-4 0.0 0.0 19.732969241043076 0.0 21 5.949220429028032E-4 0.0 0.0 20.70670789476424 0.0 22 5.949220429028032E-4 0.0 0.0 21.740979866350763 0.0 23 5.949220429028032E-4 0.0 0.0 22.814516692768873 0.0 24 5.949220429028032E-4 0.0 0.0 23.619148755794914 0.0 25 5.949220429028032E-4 0.0 0.0 24.38406977245719 0.0 26 5.949220429028032E-4 0.0 0.0 25.054398184297924 0.0 27 5.949220429028032E-4 0.0 0.0 25.746738711726064 0.0 28 5.949220429028032E-4 0.0 0.0 26.44844926132992 0.0 29 5.949220429028032E-4 0.0 0.0 27.188234821679554 0.0 30 5.949220429028032E-4 0.0 0.0 27.996882608495188 0.0 31 5.949220429028032E-4 0.0 0.0 28.71539970581105 0.0 32 5.949220429028032E-4 0.0 0.0 29.417853907968535 0.0 33 5.949220429028032E-4 0.0 0.0 30.092495504620313 0.0 34 5.949220429028032E-4 0.0 0.0 30.74051433985219 0.0 35 5.949220429028032E-4 0.0 0.0 31.426459455319122 0.0 36 5.949220429028032E-4 0.0 0.0 32.06510826837528 0.0 37 5.949220429028032E-4 0.0 0.0 32.74659146852044 0.0 38 5.949220429028032E-4 0.0 0.0 33.409037163292716 0.0 39 5.949220429028032E-4 0.0 0.0 34.08561225658393 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTAGCG 35 1.2109194E-7 45.000004 1 TAGCACG 30 2.1641517E-6 45.000004 1 TTGCGCG 60 0.0 45.000004 1 CTCGCGG 30 2.1641517E-6 45.000004 2 GCGCGAC 40 6.8084773E-9 45.0 9 GTTTACG 25 3.8890725E-5 45.0 1 TCGATAG 45 3.8380676E-10 45.0 1 AGCGAAC 20 7.031196E-4 45.0 31 CTCGACT 20 7.031196E-4 45.0 29 CGCACGG 20 7.031196E-4 45.0 2 TCGACGG 50 2.1827873E-11 45.0 2 TAACGTC 120 0.0 41.250004 32 CGTTTTT 995 0.0 40.92965 1 TACGGTT 55 6.002665E-11 40.90909 33 CTCGTAC 50 1.0804797E-9 40.5 29 CCTCCGC 50 1.0804797E-9 40.5 45 AAACCGG 50 1.0804797E-9 40.5 2 TACGAAG 45 1.9263098E-8 40.0 1 GGCGCGA 45 1.9263098E-8 40.0 8 TAACGCG 40 3.4553705E-7 39.375 1 >>END_MODULE