##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935916.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 368433 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.04004527281758 33.0 31.0 34.0 30.0 34.0 2 32.15576780581544 33.0 31.0 34.0 30.0 34.0 3 32.21170199194969 34.0 31.0 34.0 30.0 34.0 4 35.79095792179311 37.0 35.0 37.0 35.0 37.0 5 35.81902544017501 37.0 35.0 37.0 35.0 37.0 6 35.853039765710456 37.0 35.0 37.0 35.0 37.0 7 36.02245455754506 37.0 35.0 37.0 35.0 37.0 8 35.693857499192525 37.0 35.0 37.0 35.0 37.0 9 37.44773405205289 39.0 37.0 39.0 34.0 39.0 10 37.21887561646215 39.0 37.0 39.0 34.0 39.0 11 37.15100710305537 39.0 37.0 39.0 34.0 39.0 12 37.03469558915732 39.0 37.0 39.0 34.0 39.0 13 37.00952411971783 39.0 37.0 39.0 33.0 39.0 14 38.16010780793251 40.0 37.0 41.0 33.0 41.0 15 38.28606286624705 40.0 37.0 41.0 34.0 41.0 16 38.389329946014605 40.0 37.0 41.0 34.0 41.0 17 38.34329986727573 40.0 37.0 41.0 34.0 41.0 18 38.35152660049453 40.0 37.0 41.0 34.0 41.0 19 38.35795110644269 40.0 37.0 41.0 34.0 41.0 20 38.20333683464836 40.0 37.0 41.0 34.0 41.0 21 38.20047335607831 40.0 37.0 41.0 34.0 41.0 22 38.1959189323432 40.0 37.0 41.0 34.0 41.0 23 38.225891817508206 40.0 37.0 41.0 34.0 41.0 24 38.13192357904965 40.0 37.0 41.0 34.0 41.0 25 38.062480830978764 40.0 36.0 41.0 34.0 41.0 26 37.89217306810193 40.0 36.0 41.0 34.0 41.0 27 37.81738877896388 40.0 36.0 41.0 33.0 41.0 28 37.81209066505986 40.0 36.0 41.0 33.0 41.0 29 37.79954292910787 40.0 36.0 41.0 33.0 41.0 30 37.63860186248246 40.0 36.0 41.0 33.0 41.0 31 37.65220270714078 40.0 36.0 41.0 33.0 41.0 32 37.57517920490292 40.0 35.0 41.0 33.0 41.0 33 37.5129969356708 40.0 35.0 41.0 33.0 41.0 34 37.47832306009505 40.0 35.0 41.0 33.0 41.0 35 37.456984037803345 40.0 35.0 41.0 33.0 41.0 36 37.38761728726797 40.0 35.0 41.0 33.0 41.0 37 37.29378747289195 39.0 35.0 41.0 33.0 41.0 38 37.24531190202832 39.0 35.0 41.0 33.0 41.0 39 37.22608723974237 39.0 35.0 41.0 33.0 41.0 40 37.17350508776358 39.0 35.0 41.0 33.0 41.0 41 37.07579668487893 39.0 35.0 41.0 32.0 41.0 42 37.06617485404402 39.0 35.0 41.0 32.0 41.0 43 37.00546096576583 39.0 35.0 41.0 32.0 41.0 44 36.93010398091376 39.0 35.0 41.0 32.0 41.0 45 36.830843056946584 39.0 35.0 41.0 32.0 41.0 46 36.781528798994664 39.0 35.0 41.0 32.0 41.0 47 36.722812560221264 39.0 35.0 41.0 31.0 41.0 48 36.68850781553227 39.0 35.0 41.0 31.0 41.0 49 36.662755507785675 39.0 35.0 41.0 31.0 41.0 50 36.54213113374752 39.0 35.0 41.0 31.0 41.0 51 35.506295581557566 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 6.0 10 9.0 11 10.0 12 8.0 13 5.0 14 11.0 15 12.0 16 20.0 17 32.0 18 58.0 19 124.0 20 242.0 21 425.0 22 596.0 23 884.0 24 1243.0 25 1729.0 26 2306.0 27 2746.0 28 3268.0 29 3961.0 30 4793.0 31 6351.0 32 8516.0 33 12201.0 34 23527.0 35 31203.0 36 25479.0 37 39131.0 38 71145.0 39 128274.0 40 113.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.55997698360353 22.362274823373586 23.767414970971657 11.310333222051227 2 31.50260698688771 26.32391778152337 23.86838312529008 18.30509210629884 3 32.77719422527298 25.07131554448163 25.791120773654914 16.36036945659048 4 29.748421015489928 24.609901936037218 26.652607122597594 18.98906992587526 5 26.392315563481013 29.864317257140378 23.941395043332168 19.801972136046444 6 25.92845917710954 34.42389796788019 24.504862485173696 15.142780369836577 7 77.34784886261545 6.234512109393024 10.702352937983296 5.715286090008224 8 76.39217985359618 6.909804496339904 9.875879739328452 6.822135910735466 9 69.77985142481809 8.747044917257684 12.370227422625009 9.102876235299227 10 40.79574848072784 25.077015359644765 19.405427852553924 14.72180830707347 11 31.4257951920702 24.876707569625957 24.637586752543882 19.05991048575996 12 29.324463335260415 20.54403378633293 29.41783173602799 20.71367114237867 13 24.783610588628054 24.4258793321988 29.98129917786952 20.80921090130363 14 19.039011163495125 29.570641066353993 28.717840150040846 22.672507620110032 15 18.682637005914238 25.88611769304053 35.82116694215773 19.610078358887503 16 20.526662921073846 25.724894349854655 30.783887436793123 22.96455529227838 17 19.544666194396267 26.735390152347914 28.194814253880622 25.52512939937519 18 21.02906091473891 26.59153767442113 30.07792461587317 22.301476794966792 19 24.11483227615333 26.71964780570687 26.651792863288577 22.51372705485122 20 24.975775785556667 27.090407211080443 28.285468456951467 19.648348546411423 21 23.34861426636593 27.675316814726152 28.435835009350413 20.540233909557504 22 20.88520843681212 25.632068788626427 27.411496798603817 26.071225975957635 23 21.98907264007296 26.809487749468698 27.93017997844927 23.271259632009077 24 23.33287191972489 24.22720006079803 28.303653581519573 24.13627443795751 25 21.928274611666165 27.014681095341626 26.266919629891998 24.79012466310021 26 20.705528549288474 27.347984572500287 28.286825555799833 23.659661322411402 27 23.539693784215853 26.39882963795317 28.52594637288191 21.53553020494907 28 20.852366644681666 25.885574853501183 30.034768872495132 23.22728962932202 29 24.35965290839854 24.199786664061037 28.68472693814072 22.755833489399702 30 24.62971557922336 25.54277168440395 28.127230731232 21.70028200514069 31 25.995228440449146 26.97152535196359 24.90249244774491 22.13075375984236 32 27.1940895630956 26.275876482291217 26.329074757147158 20.200959197466027 33 24.993418070585424 27.155547955802007 25.76045033968184 22.090583633930727 34 24.497534151392518 26.497897853883885 26.906656027011692 22.0979119677119 35 25.43963217192814 23.86322614966629 27.662017246012166 23.035124432393406 36 26.47754137115839 27.985278191692924 25.6212119978395 19.915968439309182 37 24.330882412813185 27.017395293038355 30.061368009923108 18.590354284225356 38 24.659843173657084 26.381187352924414 26.463970382674734 22.49499909074377 39 25.71105194160132 25.17445505695744 27.833554540445615 21.28093846099562 40 25.80876305868367 24.001650232199612 28.46894822125054 21.72063848786618 41 21.99015831915165 27.728243669812418 26.173551229124424 24.1080467819115 42 23.74922984640355 25.949358499374377 28.19318573526258 22.108225918959484 43 25.47627384083402 24.146316969435418 28.407878773074074 21.96953041665649 44 23.276416607632868 24.11564653546235 28.049333257335796 24.558603599568983 45 23.424883221644098 23.134735487863463 27.055936900331943 26.38444439016049 46 25.809577317992687 25.131299313579404 27.2193316016752 21.839791766752708 47 22.620395024332783 23.612434282488266 30.99640911644722 22.770761576731726 48 22.801432010704794 22.966998070205438 29.271807899943813 24.959762019145952 49 23.508209090933764 22.77781849074323 31.297956480554127 22.416015937768876 50 22.571268046021935 21.762165712626178 30.172107275949767 25.494458965402124 51 21.3216514264466 22.48821359650194 27.208746230657948 28.98138874639351 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 175.0 1 471.5 2 768.0 3 1009.0 4 1250.0 5 911.5 6 573.0 7 568.0 8 563.0 9 567.0 10 571.0 11 573.5 12 576.0 13 584.0 14 592.0 15 634.5 16 677.0 17 689.0 18 701.0 19 680.5 20 660.0 21 799.0 22 938.0 23 1035.5 24 1133.0 25 1574.5 26 2375.0 27 2734.0 28 3298.0 29 3862.0 30 4669.0 31 5476.0 32 6431.5 33 7387.0 34 7434.5 35 7482.0 36 7995.0 37 8508.0 38 9505.0 39 10502.0 40 13060.5 41 15619.0 42 17706.0 43 19793.0 44 22576.0 45 25359.0 46 31287.5 47 37216.0 48 40056.5 49 42897.0 50 42326.5 51 41756.0 52 35114.5 53 28473.0 54 24718.0 55 20963.0 56 18997.0 57 17031.0 58 15858.0 59 14685.0 60 14210.5 61 13736.0 62 12377.0 63 11018.0 64 8943.5 65 6869.0 66 6198.5 67 5528.0 68 4431.5 69 3335.0 70 2847.5 71 2360.0 72 2161.5 73 1963.0 74 1555.0 75 971.0 76 795.0 77 602.0 78 409.0 79 321.0 80 233.0 81 163.5 82 94.0 83 48.5 84 3.0 85 4.0 86 5.0 87 3.0 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 368433.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.165993159000834 #Duplication Level Percentage of deduplicated Percentage of total 1 69.79957941596038 22.451727939949166 2 12.550201405875697 8.073793851309606 3 4.78331093307806 4.615798402522883 4 2.344997866615992 3.017167413417661 5 1.3938389479074456 2.2417107031569907 6 0.9023584271188656 1.7415152996203307 7 0.6733318843503846 1.5160872150026128 8 0.5461205599757964 1.4053208156936938 9 0.44859773113766815 1.2986632395825777 >10 6.34820431257983 43.86292445849709 >50 0.13822565996023906 2.8924625993210196 >100 0.06360076378538607 3.8725284347944657 >500 0.002544030551415443 0.44898089763130883 >1k 0.005088061102830886 2.5613187295006012 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTGC 2127 0.5773098500948612 Illumina Single End Adapter 1 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTGC 1936 0.5254686740872831 Illumina Single End Adapter 1 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGC 1472 0.39952990095892604 No Hit CTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTGCT 1301 0.3531171203448117 Illumina Single End Adapter 1 (95% over 23bp) GAATCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTC 1301 0.3531171203448117 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCG 1253 0.3400889714004989 No Hit TCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTGC 587 0.15932340479815868 Illumina Single End Adapter 1 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 543 0.14738093493253862 No Hit CGCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTG 516 0.14005260115136267 Illumina Single End Adapter 1 (95% over 21bp) ACTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCCGTCTTCTGC 470 0.12756729174639622 Illumina Single End Adapter 1 (95% over 22bp) TGCGAAGGACATAGGCTTCATTAAGTTGGACTAAGCGACCTTGAATGGATT 432 0.11725334049881525 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGTGAGATCGTATGCC 393 0.1066679694815611 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.428395393463669E-4 0.0 0.0 0.36858804721618316 0.0 2 5.428395393463669E-4 0.0 0.0 1.8214980742767342 0.0 3 5.428395393463669E-4 0.0 0.0 2.4821337936612626 0.0 4 5.428395393463669E-4 0.0 0.0 3.332220512277673 0.0 5 5.428395393463669E-4 0.0 0.0 5.844753320142333 0.0 6 5.428395393463669E-4 0.0 0.0 6.99638740286565 0.0 7 5.428395393463669E-4 0.0 0.0 8.21479074892857 0.0 8 5.428395393463669E-4 0.0 0.0 10.145670990383598 0.0 9 5.428395393463669E-4 0.0 0.0 10.804678191150087 0.0 10 8.142593090195504E-4 0.0 0.0 12.587906077902902 0.0 11 8.142593090195504E-4 0.0 0.0 14.684352378858572 0.0 12 8.142593090195504E-4 0.0 0.0 16.725157627031237 0.0 13 8.142593090195504E-4 0.0 0.0 17.419177978085568 0.0 14 8.142593090195504E-4 0.0 0.0 17.686797870983327 0.0 15 8.142593090195504E-4 0.0 0.0 18.224480434705903 0.0 16 8.142593090195504E-4 0.0 0.0 19.248547225682824 0.0 17 8.142593090195504E-4 0.0 0.0 20.465322053127707 0.0 18 8.142593090195504E-4 0.0 0.0 21.779265158115585 0.0 19 8.142593090195504E-4 0.0 0.0 22.640208667518923 0.0 20 8.142593090195504E-4 0.0 0.0 23.42596890072279 0.0 21 8.142593090195504E-4 0.0 0.0 24.416922479799585 0.0 22 8.142593090195504E-4 0.0 0.0 25.414390133348533 0.0 23 8.142593090195504E-4 0.0 0.0 26.30654691626429 0.0 24 8.142593090195504E-4 0.0 0.0 27.05865109802868 0.0 25 8.142593090195504E-4 0.0 0.0 27.6940447788336 0.0 26 8.142593090195504E-4 0.0 0.0 28.28655413603016 0.0 27 8.142593090195504E-4 0.0 0.0 28.880420592075087 0.0 28 8.142593090195504E-4 0.0 0.0 29.507943099559487 0.0 29 8.142593090195504E-4 0.0 0.0 30.122437458099572 0.0 30 8.142593090195504E-4 0.0 0.0 30.79230144965299 0.0 31 8.142593090195504E-4 0.0 0.0 31.47519359015072 0.0 32 8.142593090195504E-4 0.0 0.0 32.1019018383261 0.0 33 8.142593090195504E-4 0.0 0.0 32.69766823275874 0.0 34 8.142593090195504E-4 0.0 0.0 33.306191356366014 0.0 35 8.142593090195504E-4 0.0 0.0 33.9206857149061 0.0 36 8.142593090195504E-4 0.0 0.0 34.52948025828305 0.0 37 8.142593090195504E-4 0.0 0.0 35.134203505114904 0.0 38 8.142593090195504E-4 0.0 0.0 35.75032638227303 0.0 39 8.142593090195504E-4 0.0 0.0 36.370520555976256 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGAACG 35 1.2089185E-7 45.000004 1 GTCGAGG 20 7.02704E-4 45.0 2 CGAAAGG 25 3.8856288E-5 45.0 2 CGACGGT 25 3.8856288E-5 45.0 28 ACGTTAG 20 7.02704E-4 45.0 1 GCGGTAG 20 7.02704E-4 45.0 1 CCGATAC 25 3.8856288E-5 45.0 11 CCCTACA 25 3.8856288E-5 45.0 27 TTGTACC 50 2.1827873E-11 45.0 20 GCCCTCG 50 2.1827873E-11 45.0 13 ACGTGCG 25 3.8856288E-5 45.0 1 ACGTGAG 25 3.8856288E-5 45.0 44 TCCACCG 20 7.02704E-4 45.0 18 ATGACGG 20 7.02704E-4 45.0 2 CTACCGG 25 3.8856288E-5 45.0 2 ACGTCCG 20 7.02704E-4 45.0 15 TATAGCG 25 3.8856288E-5 45.0 1 TGTAGCG 25 3.8856288E-5 45.0 1 CGATGGA 20 7.02704E-4 45.0 10 ACGTAAG 20 7.02704E-4 45.0 1 >>END_MODULE