##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935914.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 515887 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.15169794935713 33.0 31.0 34.0 30.0 34.0 2 32.272063455756786 34.0 31.0 34.0 30.0 34.0 3 32.31400674954011 34.0 31.0 34.0 30.0 34.0 4 35.85899819146441 37.0 35.0 37.0 35.0 37.0 5 35.88628905167217 37.0 35.0 37.0 35.0 37.0 6 35.90800117079903 37.0 35.0 37.0 35.0 37.0 7 36.056985347566425 37.0 35.0 37.0 35.0 37.0 8 35.76642365479262 37.0 35.0 37.0 35.0 37.0 9 37.505064093493345 39.0 37.0 39.0 35.0 39.0 10 37.2615398333356 39.0 37.0 39.0 34.0 39.0 11 37.20062339233204 39.0 37.0 39.0 34.0 39.0 12 37.08552260475647 39.0 37.0 39.0 34.0 39.0 13 37.043172245084676 39.0 37.0 39.0 33.0 39.0 14 38.18039609449356 40.0 37.0 41.0 33.0 41.0 15 38.32295250704127 40.0 37.0 41.0 34.0 41.0 16 38.42943706664444 40.0 38.0 41.0 34.0 41.0 17 38.39963596679118 40.0 37.0 41.0 34.0 41.0 18 38.38180648087663 40.0 37.0 41.0 34.0 41.0 19 38.38263805833448 40.0 37.0 41.0 34.0 41.0 20 38.27038285516014 40.0 37.0 41.0 34.0 41.0 21 38.24214605136396 40.0 37.0 41.0 34.0 41.0 22 38.232081831874034 40.0 37.0 41.0 34.0 41.0 23 38.25697100333988 40.0 37.0 41.0 34.0 41.0 24 38.195982841203595 40.0 37.0 41.0 34.0 41.0 25 38.110768443476964 40.0 37.0 41.0 34.0 41.0 26 37.95082837908301 40.0 36.0 41.0 34.0 41.0 27 37.91264172192748 40.0 36.0 41.0 34.0 41.0 28 37.8772405584944 40.0 36.0 41.0 34.0 41.0 29 37.85545090300783 40.0 36.0 41.0 33.0 41.0 30 37.74374233116942 40.0 36.0 41.0 33.0 41.0 31 37.758947211307905 40.0 36.0 41.0 33.0 41.0 32 37.67778214996695 40.0 36.0 41.0 33.0 41.0 33 37.62089953807714 40.0 36.0 41.0 33.0 41.0 34 37.5412910191573 40.0 36.0 41.0 33.0 41.0 35 37.47522034864224 40.0 35.0 41.0 33.0 41.0 36 37.44126911513568 40.0 35.0 41.0 33.0 41.0 37 37.40153560760399 40.0 35.0 41.0 33.0 41.0 38 37.31239980848519 40.0 35.0 41.0 32.0 41.0 39 37.27984229104435 40.0 35.0 41.0 32.0 41.0 40 37.147908359776466 39.0 35.0 41.0 32.0 41.0 41 37.01115360534381 39.0 35.0 41.0 32.0 41.0 42 36.997123401054886 39.0 35.0 41.0 32.0 41.0 43 36.93727696181528 39.0 35.0 41.0 32.0 41.0 44 36.839484228135234 39.0 35.0 41.0 32.0 41.0 45 36.68581491683256 39.0 35.0 41.0 31.0 41.0 46 36.580417804674276 39.0 35.0 41.0 31.0 41.0 47 36.47410964028944 38.0 35.0 41.0 31.0 41.0 48 36.33884939919013 38.0 35.0 40.0 31.0 41.0 49 36.23589468236261 37.0 35.0 40.0 31.0 41.0 50 36.04804540529224 37.0 35.0 40.0 31.0 41.0 51 35.04915417523605 36.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 12.0 9 13.0 10 21.0 11 23.0 12 15.0 13 11.0 14 21.0 15 28.0 16 42.0 17 57.0 18 110.0 19 198.0 20 324.0 21 551.0 22 813.0 23 1267.0 24 1823.0 25 2399.0 26 3201.0 27 3877.0 28 4596.0 29 5515.0 30 6910.0 31 8979.0 32 11477.0 33 17079.0 34 33348.0 35 40366.0 36 36851.0 37 56076.0 38 105475.0 39 174254.0 40 153.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.8211992161074 21.372509871347795 24.40844603566285 11.397844876881953 2 32.5075064888241 25.137093976006376 24.15916663920587 18.19623289596365 3 32.8405251537643 24.329358948762035 25.072351115651298 17.757764781822377 4 29.46090907504938 25.250490902077395 25.13089106722984 20.157708955643386 5 26.087108223312473 29.690610540680417 23.746285523767803 20.47599571223931 6 27.161762168847055 33.83744889869293 23.53131596648103 15.469472965978984 7 79.38211274949747 6.265131705199006 8.967080000077535 5.38567554522599 8 78.93996165827014 6.042214671042302 8.952735773531801 6.065087897155772 9 72.82544433180135 7.842415102532144 11.421299625693223 7.910840939973289 10 41.616284186265595 25.992513864470318 17.404198981559915 14.98700296770417 11 32.323163793621475 25.472051049939232 23.059701058565153 19.145084097874147 12 30.931579977785834 21.580113474462433 27.634540122158533 19.853766425593204 13 26.917522635771014 22.842017728688646 28.754746679020794 21.48571295651955 14 20.58687270661986 26.83068191289953 29.474090256199514 23.108355124281093 15 19.895829900734075 25.442974915049227 34.128985611190046 20.532209573026652 16 23.64955891503372 25.02098327734562 30.628994334030512 20.700463473590148 17 22.895711657785522 25.080686274319763 28.21024759298063 23.81335447491408 18 24.645901137264556 25.39005634954942 28.132711233273955 21.831331279912074 19 25.66065824492573 27.38293463491036 26.00433815932559 20.952068960838325 20 27.869862973868308 26.065010360796066 26.566864448997553 19.498262216338073 21 26.09524954108167 26.573455039572618 26.90007695483701 20.4312184645087 22 23.263234002795187 25.429406052100557 27.399217270448762 23.908142674655497 23 23.301032978152193 26.62307830978489 27.901265199549513 22.1746235125134 24 24.701533475354097 23.558647533277636 27.69637536902461 24.043443622343652 25 23.203337164921773 26.152626447264616 25.56238090899751 25.081655478816096 26 22.869155454585986 27.06968774169537 26.643819286006433 23.417337517712213 27 23.727482956538932 27.237553960460332 26.824866685921528 22.210096397079205 28 21.877077732139014 27.660320961761002 27.042937697596564 23.419663608503413 29 24.80174922027498 26.596715947484622 26.319911143331776 22.281623688908617 30 25.284994582146865 25.61898245158339 26.249159215099432 22.846863751170314 31 26.591869925002953 26.30207778059924 24.41891344422325 22.687138850174556 32 27.97705699116279 27.10380373996631 24.162655775392672 20.75648349347822 33 26.4495907049412 26.86363486577487 24.22565406765435 22.461120361629582 34 26.127233289460676 25.426886120410092 26.729884645280844 21.715995944848387 35 24.582515163204345 26.26195271445103 26.4321450240072 22.723387098337426 36 24.792251016210916 29.640211906871077 24.105472710108998 21.46206436680901 37 26.096800268275803 28.397110219873735 25.072932638349094 20.433156873501368 38 24.640279751185822 27.137919738237247 24.692422953088563 23.529377557488367 39 26.091954245794135 24.69087222589443 25.233626743841192 23.983546784470242 40 26.0869143824132 23.166507394061103 28.362412698904993 22.384165524620702 41 22.061226586442377 26.92217481735341 27.009403222023426 24.007195374180778 42 24.052166462810654 26.459670431703064 27.24433839193467 22.24382471355161 43 24.530178120402336 25.723656537187406 25.979914206017984 23.76625113639227 44 24.23088777193455 24.918829123432072 26.062684270004866 24.787598834628515 45 25.364275509946943 22.674733032621486 25.98262797860772 25.97836347882385 46 24.353007538472575 25.02156480004342 26.025660658244927 24.59976700323908 47 23.039735445940682 25.59029399849192 28.488409283428346 22.881561272139052 48 22.962586768032534 24.276052701463694 28.016212852814665 24.745147677689104 49 23.85522410915569 23.9168655151225 28.52523905428902 23.702671321432796 50 21.398290710950267 24.20859606851888 28.571954711012292 25.821158509518554 51 21.489008251807082 23.354145384551266 27.189287576542924 27.967558787098724 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 245.0 1 558.0 2 871.0 3 1294.5 4 1718.0 5 1240.0 6 762.0 7 744.5 8 727.0 9 743.0 10 759.0 11 779.5 12 800.0 13 842.0 14 884.0 15 841.0 16 798.0 17 873.0 18 948.0 19 1007.5 20 1067.0 21 1211.5 22 1356.0 23 1537.0 24 1718.0 25 2222.0 26 3287.0 27 3848.0 28 4421.5 29 4995.0 30 6040.0 31 7085.0 32 7561.5 33 8038.0 34 9886.0 35 11734.0 36 12619.0 37 13504.0 38 15064.5 39 16625.0 40 18240.0 41 19855.0 42 21451.5 43 23048.0 44 25889.0 45 28730.0 46 30749.5 47 32769.0 48 36830.5 49 40892.0 50 46665.5 51 52439.0 52 51912.0 53 51385.0 54 45569.5 55 39754.0 56 36334.5 57 32915.0 58 30841.0 59 28767.0 60 27257.5 61 25748.0 62 23343.0 63 20938.0 64 17598.5 65 14259.0 66 11506.5 67 8754.0 68 7332.5 69 5911.0 70 4672.5 71 3434.0 72 2937.5 73 2441.0 74 1874.0 75 985.5 76 664.0 77 539.5 78 415.0 79 273.5 80 132.0 81 103.5 82 75.0 83 48.0 84 21.0 85 16.5 86 12.0 87 10.0 88 8.0 89 5.5 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 515887.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.44368100798724 #Duplication Level Percentage of deduplicated Percentage of total 1 71.02371263647291 23.04270676780679 2 10.83101413280889 7.027959350357063 3 3.9374760450515334 3.8323865034672937 4 2.056822005506539 2.669235081474509 5 1.2714560339624175 2.062535699077863 6 0.9292371499676381 1.808872420459275 7 0.8007072528761624 1.8184523485167192 8 0.6911359593641593 1.7938395679008012 9 0.6406148069900809 1.8705512202281547 >10 7.690475165940932 48.92787469381253 >50 0.08268619485809611 1.8208694512449244 >100 0.04104132299525938 2.244609798862305 >500 0.0024141954703093753 0.5431865639050888 >1k 0.0012070977351546876 0.5369205328867172 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCTGC 1468 0.2845584401235154 TruSeq Adapter, Index 14 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCTGC 1274 0.24695330566577564 TruSeq Adapter, Index 14 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTCTGCT 876 0.16980462775762908 Illumina PCR Primer Index 8 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 765 0.1482882879390254 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGCCGTCTTC 606 0.11746758495562012 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGGCGTATCGTATGC 527 0.10215415391355083 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9384089926669987E-4 0.0 0.0 0.1763952183326969 0.0 2 1.9384089926669987E-4 0.0 0.0 0.8949634319143533 0.0 3 1.9384089926669987E-4 0.0 0.0 1.2752792762756184 0.0 4 1.9384089926669987E-4 0.0 0.0 1.7798471370668383 0.0 5 1.9384089926669987E-4 0.0 0.0 3.236367654156821 0.0 6 1.9384089926669987E-4 0.0 0.0 4.030727659351757 0.0 7 1.9384089926669987E-4 0.0 0.0 4.828382959834228 0.0 8 1.9384089926669987E-4 0.0 0.0 6.066832465249173 0.0 9 1.9384089926669987E-4 0.0 0.0 6.574307939529393 0.0 10 1.9384089926669987E-4 0.0 0.0 7.673967361069382 0.0 11 1.9384089926669987E-4 0.0 0.0 9.129906355461564 0.0 12 1.9384089926669987E-4 0.0 0.0 10.373201883358178 0.0 13 1.9384089926669987E-4 0.0 0.0 10.875055971559663 0.0 14 1.9384089926669987E-4 0.0 0.0 11.106695846183369 0.0 15 1.9384089926669987E-4 0.0 0.0 11.53489039266351 0.0 16 1.9384089926669987E-4 0.0 0.0 12.275168786963036 0.0 17 3.8768179853339974E-4 0.0 0.0 13.106552403917913 0.0 18 3.8768179853339974E-4 0.0 0.0 13.986202404790196 0.0 19 3.8768179853339974E-4 0.0 0.0 14.548922535361426 0.0 20 3.8768179853339974E-4 0.0 0.0 15.126568415176191 0.0 21 3.8768179853339974E-4 0.0 0.0 15.828466311420913 0.0 22 5.815226978000996E-4 0.0 0.0 16.599565408703842 0.0 23 5.815226978000996E-4 0.0 0.0 17.299524895955898 0.0 24 7.753635970667995E-4 0.0 0.0 17.852746822463057 0.0 25 9.692044963334994E-4 0.0 0.0 18.354213228866012 0.0 26 9.692044963334994E-4 0.0 0.0 18.834938659047427 0.0 27 9.692044963334994E-4 0.0 0.0 19.315664089228843 0.0 28 9.692044963334994E-4 0.0 0.0 19.81034606415746 0.0 29 9.692044963334994E-4 0.0 0.0 20.301151221100746 0.0 30 9.692044963334994E-4 0.0 0.0 20.87356339663531 0.0 31 9.692044963334994E-4 0.0 0.0 21.379294302822128 0.0 32 9.692044963334994E-4 0.0 0.0 21.904796980734154 0.0 33 9.692044963334994E-4 0.0 0.0 22.387654660807502 0.0 34 9.692044963334994E-4 0.0 0.0 22.86876777278745 0.0 35 9.692044963334994E-4 0.0 0.0 23.403574813864278 0.0 36 9.692044963334994E-4 0.0 0.0 23.931015900768966 0.0 37 9.692044963334994E-4 0.0 0.0 24.464078373752393 0.0 38 9.692044963334994E-4 0.0 0.0 25.008383618893284 0.0 39 9.692044963334994E-4 0.0 0.0 25.672094857982465 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGTA 20 7.0296664E-4 45.000004 27 CGTTAGG 40 6.8030204E-9 45.000004 2 TATTGCG 20 7.0296664E-4 45.000004 1 TCATGCG 20 7.0296664E-4 45.000004 23 TCGTCTG 20 7.0296664E-4 45.000004 18 CAGTACG 20 7.0296664E-4 45.000004 1 CGATATA 20 7.0296664E-4 45.000004 10 ATACCGG 30 2.1631658E-6 45.000004 2 GACGTAA 25 3.887806E-5 45.0 21 ATAGCCG 25 3.887806E-5 45.0 1 CTAACGG 25 3.887806E-5 45.0 2 GCCGAAC 25 3.887806E-5 45.0 11 AATAGCG 25 3.887806E-5 45.0 1 CGTATGG 50 1.0786607E-9 40.5 2 ATATGCG 40 3.4532786E-7 39.375004 1 AATACGG 40 3.4532786E-7 39.375004 2 CAGTTGG 75 0.0 39.0 2 CGAGGGA 225 0.0 39.0 4 ACATACG 75 0.0 39.0 17 GGGTACG 35 6.2415947E-6 38.571426 7 >>END_MODULE