SRR2935913.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935913.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	760203
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2219	0.29189571732813474	No Hit
GCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTGC	1428	0.18784456257078702	No Hit
CCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTGC	1190	0.15653713547565584	No Hit
CTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTGCT	1127	0.14824987536223877	No Hit
CGCTGTCTCTTATACACATCTGACGCCTAGGAATTCGTATGCCGTCTTCTG	763	0.10036792804027346	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGACC	25	3.8895545E-5	45.0	30
CTACGAA	80	0.0	45.0	11
CGGTATC	25	3.8895545E-5	45.0	42
CGTTTTT	1075	0.0	39.976746	1
TACGAAT	85	0.0	39.705883	12
TTACGCG	40	3.4561708E-7	39.375	1
CCGTTAC	35	6.2455E-6	38.571426	45
ACAACGA	335	0.0	38.28358	13
CACAACG	335	0.0	38.28358	12
AGCGACT	325	0.0	38.076923	19
CGACGGT	30	1.139558E-4	37.500004	28
CTATACG	30	1.139558E-4	37.500004	1
ACGGGTC	60	1.546141E-10	37.500004	5
GATTACG	30	1.139558E-4	37.500004	1
TGTCGAC	30	1.139558E-4	37.500004	29
CGAATAT	90	0.0	37.5	14
ACACAAC	345	0.0	37.173912	11
AACGAGC	355	0.0	36.760563	15
TAGACGG	135	0.0	36.666664	2
AGGGCGA	590	0.0	36.61017	6