##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935906.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 249018 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.97797347982877 33.0 31.0 34.0 30.0 34.0 2 32.10096057313126 33.0 31.0 34.0 30.0 34.0 3 32.16495996273362 34.0 31.0 34.0 30.0 34.0 4 35.73987021018561 37.0 35.0 37.0 33.0 37.0 5 35.77762250118465 37.0 35.0 37.0 35.0 37.0 6 35.809812945248936 37.0 35.0 37.0 35.0 37.0 7 35.98299721305287 37.0 35.0 37.0 35.0 37.0 8 35.682761888698806 37.0 35.0 37.0 35.0 37.0 9 37.42977616075947 39.0 37.0 39.0 34.0 39.0 10 37.1433952565678 39.0 37.0 39.0 33.0 39.0 11 37.08578897910994 39.0 37.0 39.0 34.0 39.0 12 36.98786031531857 39.0 37.0 39.0 33.0 39.0 13 36.953212217590696 39.0 37.0 39.0 33.0 39.0 14 38.06373836429495 40.0 37.0 41.0 33.0 41.0 15 38.229332819314266 40.0 37.0 41.0 34.0 41.0 16 38.35240022809596 40.0 37.0 41.0 34.0 41.0 17 38.32716912030455 40.0 37.0 41.0 34.0 41.0 18 38.313503441518286 40.0 37.0 41.0 34.0 41.0 19 38.317559373218 40.0 37.0 41.0 34.0 41.0 20 38.173272614831056 40.0 37.0 41.0 34.0 41.0 21 38.150145772594755 40.0 37.0 41.0 34.0 41.0 22 38.16728911163048 40.0 37.0 41.0 34.0 41.0 23 38.17443718927949 40.0 37.0 41.0 34.0 41.0 24 38.11968612710728 40.0 36.0 41.0 34.0 41.0 25 38.03500550161033 40.0 36.0 41.0 34.0 41.0 26 37.90794641351228 40.0 36.0 41.0 34.0 41.0 27 37.84136488125356 40.0 36.0 41.0 33.0 41.0 28 37.72660209302139 40.0 36.0 41.0 33.0 41.0 29 37.77053064437109 40.0 36.0 41.0 33.0 41.0 30 37.634448112184664 40.0 36.0 41.0 33.0 41.0 31 37.57665710912464 40.0 35.0 41.0 33.0 41.0 32 37.516127348223826 40.0 35.0 41.0 33.0 41.0 33 37.49463492598929 40.0 35.0 41.0 33.0 41.0 34 37.40140873350521 40.0 35.0 41.0 33.0 41.0 35 37.45332064348762 40.0 35.0 41.0 33.0 41.0 36 37.33884297520661 40.0 35.0 41.0 33.0 41.0 37 37.23570183681501 40.0 35.0 41.0 32.0 41.0 38 37.14203792496928 39.0 35.0 41.0 32.0 41.0 39 37.21450658185352 39.0 35.0 41.0 32.0 41.0 40 37.26689636893718 39.0 35.0 41.0 33.0 41.0 41 37.1872635713081 39.0 35.0 41.0 32.0 41.0 42 37.13673710334193 39.0 35.0 41.0 32.0 41.0 43 37.01635223156559 39.0 35.0 41.0 32.0 41.0 44 36.92331478045764 39.0 35.0 41.0 32.0 41.0 45 36.83698367186308 39.0 35.0 41.0 31.0 41.0 46 36.82180003051988 39.0 35.0 41.0 31.0 41.0 47 36.75851143290846 39.0 35.0 41.0 31.0 41.0 48 36.72811603980435 39.0 35.0 41.0 31.0 41.0 49 36.71107711089158 39.0 35.0 41.0 31.0 41.0 50 36.59853102988539 39.0 35.0 41.0 31.0 41.0 51 35.602868065762316 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 6.0 10 3.0 11 10.0 12 6.0 13 4.0 14 13.0 15 4.0 16 16.0 17 21.0 18 54.0 19 73.0 20 140.0 21 210.0 22 421.0 23 564.0 24 803.0 25 1098.0 26 1521.0 27 1828.0 28 2103.0 29 2660.0 30 3310.0 31 4565.0 32 5837.0 33 8106.0 34 15854.0 35 21568.0 36 18288.0 37 26831.0 38 49329.0 39 83714.0 40 52.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.764523046526755 21.847416652611457 24.799010513296228 12.589049787565557 2 31.446321149475136 24.263306267016844 25.560802833530104 18.729569749977916 3 31.073255748580426 23.661341750395554 27.47833489948518 17.787067601538844 4 28.790288252254857 24.727128159410164 26.959095326442267 19.523488261892716 5 25.30700591925082 28.689492325855966 25.602566882715305 20.400934872177913 6 25.571645423222417 32.74582560296846 25.421053899718093 16.26147507409103 7 76.15192476045908 6.207181810150271 11.120079672955368 6.5208137564352775 8 75.17488695596303 5.596784168212739 10.981535471331389 8.246793404492848 9 68.78418427583549 7.5520645093928955 13.950798737440667 9.712952477330957 10 40.62959304146688 22.352199439397953 21.076789629665328 15.94141788946984 11 28.009220217012427 23.844862620372826 25.84391489771824 22.302002264896515 12 25.84993855865841 20.5989125284116 31.812158157241644 21.738990755688345 13 23.222016079158937 24.088620099751825 33.23012794255837 19.45923587853087 14 18.554080427920873 28.147764418636406 31.247540338449433 22.050614814993295 15 16.750596342433077 24.701427206065425 37.74907837987615 20.798898071625345 16 18.930358447983682 25.11906769791742 32.665911701162166 23.284662152936736 17 18.423166196821114 25.379289850532892 30.531527841360866 25.666016111285128 18 19.79977351034865 24.599828124874506 33.407223574199456 22.193174790577388 19 21.45788657848027 25.756772602783734 29.097896537599695 23.6874442811363 20 22.61964998514164 26.959095326442267 29.756483467058608 20.66477122135749 21 21.491619079745238 26.960701636026315 31.220634652916658 20.327044631311793 22 19.696969696969695 25.103807756868978 28.326064782465526 26.873157763695797 23 18.465331823402327 26.670762756105987 30.09862740846043 24.76527801203126 24 21.373153747921837 23.67860957842405 30.459243910078786 24.488992763575325 25 19.089383096804248 26.246697025917804 29.286637913725112 25.377281963552832 26 20.137500100394348 26.44949361090363 29.348480832710887 24.064525455991134 27 23.084676609722994 27.18357709081271 28.093149892778836 21.63859640668546 28 18.10029797042784 25.97603386100603 31.31701322795942 24.606654940606703 29 22.312041699796804 23.99585572127316 29.33081142728638 24.36129115164366 30 23.821169554008144 25.16163490189464 29.479796641206658 21.537398902890555 31 21.909259571597232 26.501698672385128 28.173465371981145 23.415576384036495 32 24.442811363033996 27.145025660795607 25.87523793460714 22.53692504156326 33 23.27783533720454 25.364029909484454 28.795910335799018 22.562224417511985 34 20.25917805138584 23.805909612959706 32.8586688512477 23.07624348440675 35 21.904842220241107 24.67090732396855 27.812447292966773 25.61180316282357 36 24.329968114754756 25.04316957007124 30.14239934462569 20.484462970548314 37 20.849095246126787 25.52265298090901 33.10082002104265 20.527431751921547 38 18.549663076564745 27.20686857978138 29.253306989856153 24.990161353797717 39 19.934301938012513 26.41776899661872 32.03824623119614 21.60968283417263 40 22.186749552241203 22.129725562007565 32.36794127332161 23.315583612429624 41 19.74435582969906 24.80021524548426 28.54733392766788 26.9080949971488 42 22.458215871945 23.488261892714583 29.303102586961582 24.750419648378834 43 22.938904014970802 24.14524251258945 29.62356134897879 23.292292123460957 44 20.78163024359685 23.923571789991087 29.66291593378792 25.631882032624148 45 21.14104201302717 21.830550401978975 30.092603747520258 26.9358038374736 46 23.118810688383974 23.489065047506603 30.438361885486188 22.95376237862323 47 18.690215165168784 23.23607128801934 33.841328739287924 24.232384807523953 48 19.24961247781285 22.57105912022424 31.149153876426606 27.030174525536303 49 21.477965448280848 20.697298990434426 34.47300998321406 23.351725578070663 50 20.440691034383057 20.353147162052544 33.22852163297432 25.977640170590078 51 18.99822502790963 20.597707796223567 29.355709225839092 31.04835795002771 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 182.0 1 280.0 2 378.0 3 655.0 4 932.0 5 636.5 6 341.0 7 358.5 8 376.0 9 390.0 10 404.0 11 428.0 12 452.0 13 423.0 14 394.0 15 453.0 16 512.0 17 513.5 18 515.0 19 562.0 20 609.0 21 595.5 22 582.0 23 701.0 24 820.0 25 994.5 26 1419.0 27 1669.0 28 1771.0 29 1873.0 30 2168.0 31 2463.0 32 3098.0 33 3733.0 34 4460.0 35 5187.0 36 6325.0 37 7463.0 38 7970.5 39 8478.0 40 9923.5 41 11369.0 42 13939.5 43 16510.0 44 21859.0 45 27208.0 46 30218.5 47 33229.0 48 33006.5 49 32784.0 50 27711.0 51 22638.0 52 18788.0 53 14938.0 54 13212.0 55 11486.0 56 10602.5 57 9719.0 58 8737.0 59 7755.0 60 7131.5 61 6508.0 62 5906.5 63 5305.0 64 4671.0 65 4037.0 66 3152.0 67 2267.0 68 2051.5 69 1836.0 70 1456.0 71 1076.0 72 890.0 73 704.0 74 645.0 75 421.5 76 257.0 77 229.0 78 201.0 79 119.0 80 37.0 81 30.5 82 24.0 83 14.0 84 4.0 85 3.0 86 2.0 87 3.0 88 4.0 89 3.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 249018.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.616156261796334 #Duplication Level Percentage of deduplicated Percentage of total 1 70.62804923615633 26.56755736533102 2 12.536430698935636 9.431446722726871 3 4.783764452178369 5.398404934583042 4 2.381740346532011 3.5836766820069235 5 1.4860522466932136 2.7949786762402717 6 0.9565393771818386 2.158880080958003 7 0.7024586051179127 1.8496654860291224 8 0.5626074238558358 1.6930503015846243 9 0.4654588933608054 1.5757897019492568 >10 5.373061032763609 37.75349573123228 >50 0.07793233764985961 2.0380052847585315 >100 0.03736481942116557 2.3885823514766003 >500 0.006405397615056954 1.5083246994193191 >1k 0.002135132538352318 1.258141981704134 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 1597 0.6413191014304187 No Hit GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 1536 0.6168228802737151 No Hit CTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGCT 934 0.3750732878747721 No Hit TCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 620 0.24897798552715064 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 609 0.24456063417102378 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGC 550 0.22086756780634334 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 530 0.21283601988611264 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCG 513 0.20600920415391658 No Hit ACTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 445 0.17870194122513233 No Hit CGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG 388 0.15581202965247493 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCC 335 0.13452842766386366 No Hit GCCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG 331 0.13292211807981752 No Hit GGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG 257 0.10320539077496406 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.015773960115333E-4 0.0 0.0 0.3919395385072565 0.0 2 4.015773960115333E-4 0.0 0.0 2.146832759077657 0.0 3 4.015773960115333E-4 0.0 0.0 2.9724758852773694 0.0 4 4.015773960115333E-4 0.0 0.0 4.024207085431575 0.0 5 4.015773960115333E-4 0.0 0.0 6.902312282646235 0.0 6 4.015773960115333E-4 0.0 0.0 8.257234416789148 0.0 7 4.015773960115333E-4 0.0 0.0 9.82177995165008 0.0 8 4.015773960115333E-4 0.0 0.0 12.36456802319511 0.0 9 4.015773960115333E-4 0.0 0.0 13.314700142158399 0.0 10 8.031547920230666E-4 0.0 0.0 15.34226441462063 0.0 11 8.031547920230666E-4 0.0 0.0 18.015163562473397 0.0 12 8.031547920230666E-4 0.0 0.0 20.29692632661093 0.0 13 8.031547920230666E-4 0.0 0.0 21.169152430747978 0.0 14 8.031547920230666E-4 0.0 0.0 21.536997325494543 0.0 15 8.031547920230666E-4 0.0 0.0 22.187151129637215 0.0 16 8.031547920230666E-4 0.0 0.0 23.48745873792256 0.0 17 0.0012047321880345999 0.0 0.0 25.05883108851569 0.0 18 0.0012047321880345999 0.0 0.0 26.6852195423624 0.0 19 0.0012047321880345999 0.0 0.0 27.707234015211753 0.0 20 0.0016063095840461333 0.0 0.0 28.68868917106394 0.0 21 0.0016063095840461333 0.0 0.0 29.81792480864837 0.0 22 0.0016063095840461333 0.0 0.0 30.97607401874563 0.0 23 0.0016063095840461333 0.0 0.0 32.04145885036423 0.0 24 0.0016063095840461333 0.0 0.0 32.92292123460955 0.0 25 0.0016063095840461333 0.0 0.0 33.70358769245597 0.0 26 0.0016063095840461333 0.0 0.0 34.40273393891205 0.0 27 0.0016063095840461333 0.0 0.0 35.074572922439344 0.0 28 0.0016063095840461333 0.0 0.0 35.75163241211479 0.0 29 0.0016063095840461333 0.0 0.0 36.457605474303065 0.0 30 0.0016063095840461333 0.0 0.0 37.24550032527769 0.0 31 0.0016063095840461333 0.0 0.0 37.99926109759134 0.0 32 0.0016063095840461333 0.0 0.0 38.68354898039499 0.0 33 0.0016063095840461333 0.0 0.0 39.355789541318295 0.0 34 0.0016063095840461333 0.0 0.0 39.98988024962051 0.0 35 0.0016063095840461333 0.0 0.0 40.67617601940422 0.0 36 0.0016063095840461333 0.0 0.0 41.33516452625915 0.0 37 0.0016063095840461333 0.0 0.0 41.98049940164968 0.0 38 0.0016063095840461333 0.0 0.0 42.60535382984362 0.0 39 0.0016063095840461333 0.0 0.0 43.23944453814584 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCAT 20 7.0226315E-4 45.000004 18 CGCATGA 20 7.0226315E-4 45.000004 20 CGCGCCT 40 6.7775545E-9 45.000004 17 TAGCCGT 30 2.158631E-6 45.000004 44 CGTTAGG 20 7.0226315E-4 45.000004 2 ACGATGC 20 7.0226315E-4 45.000004 43 GTTAAAC 20 7.0226315E-4 45.000004 27 TAATTCG 20 7.0226315E-4 45.000004 4 AATTCGG 20 7.0226315E-4 45.000004 5 TACTCCG 20 7.0226315E-4 45.000004 34 TGCTCAA 20 7.0226315E-4 45.000004 33 TTTGCGC 40 6.7775545E-9 45.000004 13 CCGAATT 20 7.0226315E-4 45.000004 20 CGATGCC 20 7.0226315E-4 45.000004 44 CAGTCCG 20 7.0226315E-4 45.000004 15 GCGTGGA 20 7.0226315E-4 45.000004 3 CGCACGA 20 7.0226315E-4 45.000004 40 ACTCCGC 20 7.0226315E-4 45.000004 35 ATGCACG 20 7.0226315E-4 45.000004 1 CGCCATA 20 7.0226315E-4 45.000004 39 >>END_MODULE