##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935905.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 933166 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.938319655881163 33.0 31.0 34.0 30.0 34.0 2 31.989498117162434 33.0 31.0 34.0 30.0 34.0 3 31.98800320628913 33.0 31.0 34.0 30.0 34.0 4 35.70738218066239 37.0 35.0 37.0 33.0 37.0 5 33.61598579459603 37.0 35.0 37.0 32.0 37.0 6 34.59359106525527 37.0 35.0 37.0 30.0 37.0 7 35.710699918342506 37.0 35.0 37.0 32.0 37.0 8 35.733871572689104 37.0 35.0 37.0 35.0 37.0 9 37.63843839145447 39.0 37.0 39.0 35.0 39.0 10 37.14409547711768 39.0 37.0 39.0 34.0 39.0 11 37.1418900817218 39.0 37.0 39.0 34.0 39.0 12 37.22325824129898 39.0 37.0 39.0 34.0 39.0 13 37.22645274259885 39.0 37.0 39.0 34.0 39.0 14 38.342763238266286 40.0 38.0 41.0 34.0 41.0 15 38.42895904908666 40.0 38.0 41.0 34.0 41.0 16 38.41330910041729 40.0 38.0 41.0 34.0 41.0 17 38.385589487829606 40.0 38.0 41.0 34.0 41.0 18 38.31886502508664 40.0 38.0 41.0 34.0 41.0 19 38.205724383443034 40.0 37.0 41.0 34.0 41.0 20 38.19365579114541 40.0 37.0 41.0 34.0 41.0 21 38.127830418167825 40.0 37.0 41.0 34.0 41.0 22 38.21036021458133 40.0 37.0 41.0 34.0 41.0 23 38.20005658157284 40.0 37.0 41.0 34.0 41.0 24 38.15050376888999 40.0 37.0 41.0 34.0 41.0 25 37.969961400222466 40.0 36.0 41.0 34.0 41.0 26 38.020464740464185 40.0 37.0 41.0 34.0 41.0 27 38.02502448653294 40.0 37.0 41.0 34.0 41.0 28 37.92937698115877 40.0 36.0 41.0 34.0 41.0 29 37.95883154765605 40.0 37.0 41.0 34.0 41.0 30 37.80622418733645 40.0 36.0 41.0 33.0 41.0 31 37.744290940732945 40.0 36.0 41.0 33.0 41.0 32 37.61967431303755 40.0 36.0 41.0 33.0 41.0 33 37.48613429979232 40.0 36.0 41.0 33.0 41.0 34 37.32545120589477 40.0 36.0 41.0 33.0 41.0 35 37.21071599265297 40.0 36.0 41.0 32.0 41.0 36 37.090344054541205 40.0 36.0 41.0 32.0 41.0 37 37.03713272879638 40.0 36.0 41.0 31.0 41.0 38 36.92643538234355 40.0 36.0 41.0 31.0 41.0 39 36.86145444647576 40.0 36.0 41.0 31.0 41.0 40 36.791761594400135 40.0 35.0 41.0 31.0 41.0 41 36.65827623381049 40.0 35.0 41.0 30.0 41.0 42 36.69354648583425 40.0 35.0 41.0 30.0 41.0 43 36.633721117143146 39.0 35.0 41.0 30.0 41.0 44 36.50661940104976 39.0 35.0 41.0 30.0 41.0 45 36.47683263213619 39.0 35.0 41.0 30.0 41.0 46 36.390111727173945 39.0 35.0 41.0 30.0 41.0 47 36.31980269319714 39.0 35.0 41.0 30.0 41.0 48 36.26288677470032 39.0 35.0 41.0 30.0 41.0 49 36.19224982479002 39.0 35.0 41.0 29.0 41.0 50 36.0804219185011 39.0 35.0 41.0 29.0 41.0 51 34.92730982483288 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 4.0 9 13.0 10 10.0 11 9.0 12 12.0 13 18.0 14 7.0 15 26.0 16 43.0 17 113.0 18 233.0 19 417.0 20 862.0 21 1418.0 22 2066.0 23 2996.0 24 4401.0 25 6939.0 26 9590.0 27 11116.0 28 11373.0 29 11943.0 30 13786.0 31 17126.0 32 21973.0 33 30339.0 34 48711.0 35 62249.0 36 69041.0 37 105467.0 38 186631.0 39 314042.0 40 190.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.818426732221276 18.8132658069411 23.144113694669542 15.224193766168076 2 33.23942363952394 24.92932661498597 24.78605092770204 17.045198817788044 3 30.55222757794433 25.3135026351153 27.995233431136583 16.13903635580379 4 26.840776453492733 24.635595381743443 30.009130208344498 18.51449795641933 5 24.25849205821901 32.49175387873112 25.055670695246075 18.1940833678038 6 24.202553457798505 34.40063182756337 26.551653189250356 14.845161525387764 7 78.66896136378736 4.813398687907617 12.201687588274755 4.315952360030263 8 79.74797624431237 5.290484222528467 10.277485463465236 4.684054069693923 9 73.54629294252041 6.695378957227331 12.316565327069354 7.441762773182907 10 33.57537672825628 33.21070420482529 19.28638634498042 13.927532721938004 11 24.647919019767116 24.53229114648412 32.2098104731634 18.609979360585363 12 22.433843496226824 22.289603350314948 34.4257077518898 20.850845401568424 13 21.58608436226781 24.063885739514728 36.83256783894827 17.5174620592692 14 19.468883349800574 28.195305015399192 32.741762987507045 19.594048647293192 15 18.41322980048566 26.79898324628201 36.03892555022365 18.748861403008682 16 21.64802403859549 26.658493772812125 31.567909675234628 20.12557251335775 17 21.715428980481498 25.81062747678334 31.2312064520139 21.242737090721263 18 22.140326587123834 24.923647025288105 32.03856548566922 20.897460901918844 19 21.199979424882603 27.62241659040299 29.800914306779287 21.376689677935115 20 21.966402547885373 27.343259398649327 31.104433723474706 19.58590432999059 21 21.721644380528225 27.931257675483245 31.715686169448954 18.63141177453958 22 21.003872837201527 24.00676835632674 31.806559604614826 23.182799201856906 23 19.236341658397325 27.494679403235867 31.74654884554302 21.522430092823786 24 20.291245073223845 25.678282320616052 32.289967701352175 21.740504904807935 25 19.21662383755945 29.092465863522676 30.145011712814224 21.54589858610365 26 19.374473566332252 26.94943879224061 30.97766099493552 22.69842664649162 27 21.298568529072 26.175514324353866 30.81916829374409 21.706748852830042 28 18.228696716339858 26.207984431494502 33.228707432546834 22.334611419618803 29 19.61355214399153 24.45888512869093 31.595664651305338 24.331898076012198 30 19.8474869423018 24.99973209482557 33.38720013373827 21.765580829134365 31 20.529573516394723 25.31768195583637 30.667426802948246 23.485317724820664 32 19.662418047807144 25.924326432810453 30.068497994997674 24.34475752438473 33 19.729287179344297 25.24459742425249 31.49032433672037 23.535791059682843 34 18.80394270687102 26.381801308663196 31.584841282258463 23.229414702207325 35 18.749933023706394 25.31189520406873 30.743940520764795 25.19423125146008 36 20.45477439169451 25.898607536065395 30.770516714068023 22.876101358172072 37 19.667347503016614 26.290284901078692 31.583341013281668 22.459026582623025 38 19.45763133247461 25.91135982236815 30.527794626036524 24.103214219120712 39 21.328895394817213 25.60669805800897 29.35115509995006 23.71325144722375 40 21.134503400252473 25.156724527040204 31.079893609497134 22.62887846321019 41 19.63262699241078 26.718933180163013 29.18301781247924 24.465422014946967 42 21.434342871471955 25.19744611355322 30.11864984365054 23.249561171324288 43 22.16358075626416 24.555652477694213 30.374981514542966 22.90578525149866 44 20.472134646997425 24.967904960103564 30.49446722233772 24.065493170561293 45 20.072205802611755 23.995194852791464 30.041385991345592 25.891213353251192 46 22.10121243165739 24.816592117586797 29.317934858321028 23.764260592434784 47 18.769222196265186 25.29196305909131 32.55894449647758 23.379870248165922 48 19.95261293274723 25.033488146803464 30.50250437757055 24.511394542878758 49 20.960900847223325 23.20315999511341 32.16148037969664 23.67445877796662 50 19.658988861574468 23.947722055882874 31.954121774689604 24.43916730785305 51 19.48238577059173 23.526253635473218 29.75483461677772 27.236525977157335 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 261.0 1 588.5 2 916.0 3 5813.0 4 10710.0 5 7278.0 6 3846.0 7 3758.0 8 3670.0 9 3666.0 10 3662.0 11 3701.5 12 3741.0 13 3620.0 14 3499.0 15 3338.0 16 3177.0 17 3221.5 18 3266.0 19 3117.0 20 2968.0 21 3247.5 22 3527.0 23 4222.5 24 4918.0 25 5789.0 26 8178.5 27 9697.0 28 11528.0 29 13359.0 30 15317.5 31 17276.0 32 19004.5 33 20733.0 34 24643.5 35 28554.0 36 30944.0 37 33334.0 38 35427.0 39 37520.0 40 42374.5 41 47229.0 42 50719.5 43 54210.0 44 60169.0 45 66128.0 46 85756.0 47 105384.0 48 101907.0 49 98430.0 50 95471.0 51 92512.0 52 80506.0 53 68500.0 54 59521.5 55 50543.0 56 43817.0 57 37091.0 58 33314.5 59 29538.0 60 25663.5 61 21789.0 62 18883.0 63 15977.0 64 13368.0 65 10759.0 66 9075.5 67 7392.0 68 5882.5 69 4373.0 70 3574.0 71 2775.0 72 2366.5 73 1958.0 74 1684.0 75 1183.0 76 956.0 77 711.5 78 467.0 79 379.5 80 292.0 81 184.0 82 76.0 83 57.0 84 38.0 85 29.0 86 20.0 87 15.0 88 10.0 89 7.0 90 4.0 91 5.5 92 7.0 93 4.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 933166.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.36680787271194 #Duplication Level Percentage of deduplicated Percentage of total 1 73.44258996538329 25.2398737901469 2 10.440416064961818 7.176075460314362 3 3.988001169096314 4.111646099234509 4 1.9985416922149537 2.7473399344782363 5 1.247546914735513 2.143710256545496 6 0.9130885714643612 1.8827963703770827 7 0.7406916837558495 1.7818646151986959 8 0.6079775486965528 1.671539808558144 9 0.5340546855913206 1.651837929591465 >10 5.891252168237875 42.133801524490295 >50 0.1591197033956561 3.2995045503015614 >100 0.030442938027842252 1.8101877387727703 >500 0.002510757775480714 0.6268730940665321 >1k 0.0031384472193508924 2.2815290018563927 >5k 6.276894438701785E-4 1.4414198260676419 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTC 7477 0.801250795678368 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5887 0.6308631047423502 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGC 4294 0.4601539275970192 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCG 3874 0.41514585829316547 No Hit GCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 2987 0.32009310240621713 No Hit GAACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCT 2199 0.23564939142660576 No Hit CCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 1640 0.17574579442457183 No Hit CGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTG 1533 0.16427945295906624 No Hit CTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGCT 1452 0.15559932530760873 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTT 1109 0.11884273537612815 No Hit CGTTTCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTT 1036 0.11101990428283928 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCT 1029 0.11026976979444172 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTC 995 0.10662625942222499 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.2148620931324117E-4 0.0 0.0 0.16674418056380108 0.0 2 3.2148620931324117E-4 0.0 0.0 0.8000720129108861 0.0 3 3.2148620931324117E-4 0.0 0.0 1.1902491089473899 0.0 4 3.2148620931324117E-4 0.0 0.0 1.846295300085944 0.0 5 3.2148620931324117E-4 0.0 0.0 3.671801158636298 0.0 6 3.2148620931324117E-4 0.0 0.0 4.823793408675413 0.0 7 3.2148620931324117E-4 0.0 0.0 5.795539057359569 0.0 8 3.2148620931324117E-4 0.0 0.0 7.303095054899129 0.0 9 3.2148620931324117E-4 0.0 0.0 7.894201031756408 0.0 10 3.2148620931324117E-4 0.0 0.0 9.398863653412148 0.0 11 3.2148620931324117E-4 0.0 0.0 10.673985121618234 0.0 12 3.2148620931324117E-4 0.0 0.0 12.205866908995826 0.0 13 3.2148620931324117E-4 0.0 0.0 12.70106283340799 0.0 14 3.2148620931324117E-4 0.0 0.0 12.934676145508945 0.0 15 3.2148620931324117E-4 0.0 0.0 13.305992717265738 0.0 16 3.2148620931324117E-4 0.0 0.0 13.953358780752835 0.0 17 3.2148620931324117E-4 0.0 0.0 14.785150766315962 0.0 18 3.2148620931324117E-4 0.0 0.0 15.673202838508905 0.0 19 3.2148620931324117E-4 0.0 0.0 16.29292108799506 0.0 20 3.2148620931324117E-4 0.0 0.0 16.81522901605931 0.0 21 3.2148620931324117E-4 0.0 0.0 17.421766330963624 0.0 22 3.2148620931324117E-4 0.0 0.0 18.105353174033343 0.0 23 3.2148620931324117E-4 0.0 0.0 18.74875424093891 0.0 24 3.2148620931324117E-4 0.0 0.0 19.270740682793843 0.0 25 3.2148620931324117E-4 0.0 0.0 19.73164474487926 0.0 26 3.2148620931324117E-4 0.0 0.0 20.185154624150474 0.0 27 3.2148620931324117E-4 0.0 0.0 20.656346244933914 0.0 28 3.2148620931324117E-4 0.0 0.0 21.148327307252945 0.0 29 4.286482790843215E-4 0.0 0.0 21.64309458338602 0.0 30 4.286482790843215E-4 0.0 0.0 22.24095177063888 0.0 31 4.286482790843215E-4 0.0 0.0 22.76175942972633 0.0 32 4.286482790843215E-4 0.0 0.0 23.249239685114976 0.0 33 4.286482790843215E-4 0.0 0.0 23.755366140643787 0.0 34 4.286482790843215E-4 0.0 0.0 24.230094109729674 0.0 35 4.286482790843215E-4 0.0 0.0 24.736434889398026 0.0 36 4.286482790843215E-4 0.0 0.0 25.19958935494864 0.0 37 4.286482790843215E-4 0.0 0.0 25.680425562011475 0.0 38 4.286482790843215E-4 0.0 0.0 26.167798655330348 0.0 39 4.286482790843215E-4 0.0 0.0 26.72557722848882 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 45 3.8380676E-10 45.0 1 GATCGAC 20 7.032605E-4 45.0 9 ATAGCGA 25 3.89024E-5 45.0 10 CTACGCG 25 3.89024E-5 45.0 1 CGTCGAA 25 3.89024E-5 45.0 42 CGATCCC 20 7.032605E-4 45.0 34 TATCGCG 35 1.2115925E-7 45.0 1 CGGACTA 20 7.032605E-4 45.0 27 CGTTTTT 3725 0.0 42.52349 1 ACGACGC 70 0.0 41.785713 14 TTAGGCG 50 1.0804797E-9 40.5 1 ATTAGCG 50 1.0804797E-9 40.5 1 GCGAATG 50 1.0804797E-9 40.5 1 GTTAGCG 95 0.0 40.263157 1 TTGCGCG 45 1.927583E-8 40.0 1 ATAACGG 80 0.0 39.375 2 GCGAGAC 260 0.0 38.94231 21 CGAGACA 260 0.0 38.94231 22 CTAAGCG 35 6.2470262E-6 38.571426 1 GCGTTAG 70 0.0 38.571426 1 >>END_MODULE