##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935904.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 526126 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.73578192296142 31.0 31.0 34.0 30.0 34.0 2 31.77911374841768 31.0 31.0 34.0 30.0 34.0 3 31.84894492954159 33.0 31.0 34.0 30.0 34.0 4 35.585893873330726 37.0 35.0 37.0 33.0 37.0 5 33.43824863245686 37.0 35.0 37.0 30.0 37.0 6 34.403914651623374 37.0 35.0 37.0 30.0 37.0 7 35.4801340363335 37.0 35.0 37.0 32.0 37.0 8 35.365914248678074 37.0 35.0 37.0 33.0 37.0 9 37.258038948844955 39.0 37.0 39.0 34.0 39.0 10 36.85238136872156 39.0 37.0 39.0 32.0 39.0 11 36.882691598590455 39.0 37.0 39.0 33.0 39.0 12 36.81321394494855 39.0 35.0 39.0 33.0 39.0 13 36.62426300924113 39.0 35.0 39.0 32.0 39.0 14 37.7054317786994 40.0 36.0 41.0 33.0 41.0 15 37.6497397961705 40.0 36.0 41.0 32.0 41.0 16 37.87041507167485 40.0 36.0 41.0 33.0 41.0 17 37.68287634521008 39.0 36.0 41.0 32.0 41.0 18 37.70691811467215 39.0 36.0 41.0 33.0 41.0 19 37.62438845447669 39.0 36.0 41.0 33.0 41.0 20 37.4346050185697 39.0 35.0 41.0 32.0 41.0 21 37.575174007747194 39.0 36.0 41.0 33.0 41.0 22 37.64487024020862 39.0 36.0 41.0 33.0 41.0 23 37.57334174703398 39.0 36.0 41.0 33.0 41.0 24 37.523735759114736 39.0 35.0 41.0 32.0 41.0 25 37.46215355257106 39.0 35.0 41.0 33.0 41.0 26 37.40412752838674 39.0 35.0 41.0 32.0 41.0 27 37.35258094068721 39.0 35.0 41.0 32.0 41.0 28 37.240254235677384 39.0 35.0 41.0 32.0 41.0 29 37.24146307158361 39.0 35.0 41.0 32.0 41.0 30 37.1310579595002 39.0 35.0 41.0 32.0 41.0 31 37.233980073214404 39.0 35.0 41.0 32.0 41.0 32 37.002564024587265 39.0 35.0 41.0 31.0 41.0 33 36.803739028293606 39.0 35.0 41.0 31.0 41.0 34 36.75285768047958 39.0 35.0 41.0 31.0 41.0 35 36.60691735439799 39.0 35.0 41.0 30.0 41.0 36 36.62549465337201 39.0 35.0 41.0 31.0 41.0 37 36.561625922307584 39.0 35.0 41.0 30.0 41.0 38 36.46379954611633 39.0 35.0 41.0 30.0 41.0 39 36.40516720329351 39.0 35.0 41.0 30.0 41.0 40 36.16299137468971 39.0 35.0 41.0 30.0 41.0 41 36.10146048665148 39.0 35.0 41.0 29.0 41.0 42 36.219415121092666 39.0 35.0 41.0 30.0 41.0 43 36.256176277165544 39.0 35.0 41.0 30.0 41.0 44 36.23061966144992 39.0 35.0 41.0 30.0 41.0 45 36.245505829402084 39.0 35.0 40.0 30.0 41.0 46 36.12238133070785 39.0 35.0 40.0 30.0 41.0 47 35.86455145725549 38.0 35.0 40.0 29.0 41.0 48 35.88299950962317 38.0 35.0 40.0 28.0 41.0 49 35.859856764349225 39.0 35.0 40.0 28.0 41.0 50 35.75296031749048 38.0 35.0 40.0 28.0 41.0 51 34.44867959386155 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 8.0 10 8.0 11 10.0 12 5.0 13 6.0 14 6.0 15 18.0 16 29.0 17 50.0 18 140.0 19 376.0 20 971.0 21 1739.0 22 2631.0 23 3140.0 24 3744.0 25 4142.0 26 4791.0 27 5306.0 28 5918.0 29 7042.0 30 8679.0 31 11667.0 32 16155.0 33 22380.0 34 35540.0 35 45954.0 36 40492.0 37 59769.0 38 101169.0 39 144168.0 40 67.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 52.355899537373176 17.1937900807031 19.576679350573816 10.873631031349905 2 26.81505951045947 36.31981692598351 21.307633532651874 15.557490030905145 3 26.21900457304904 36.04839905269841 23.688432048596724 14.044164325655832 4 24.405940782246077 22.29218856319589 37.38401067424913 15.917859980308899 5 31.331087990329316 29.392388895435694 21.290147227090088 17.986375887144902 6 21.381190057134603 41.29029928192106 23.738420074278785 13.590090586665552 7 69.51395673279784 4.963829957082524 21.11414376023994 4.408069549879687 8 67.8740453807643 15.497618441209902 10.449207984399173 6.179128193626622 9 63.68398444479079 5.9763250628176525 11.315540383862421 19.024150108529135 10 41.02477353333612 21.56859763630765 20.897275557566058 16.509353272790168 11 32.997799006321685 22.322789597929013 25.293370789506696 19.38604060624261 12 25.168495759570902 19.849997909246074 29.605075590257847 25.376430740925176 13 23.87032764014704 24.01687048349635 36.44545223007417 15.66734964628245 14 20.4131709894588 32.03966350265906 26.468564564381914 21.078600943500227 15 16.247818963518245 24.42532777319501 40.072530154373666 19.254323108913074 16 17.8386926325633 25.86053530903244 27.863857707089178 28.436914351315085 17 18.705785306181408 26.70139852430787 31.182454393054137 23.41036177645659 18 18.987276812018415 24.729247366600397 31.052827649650467 25.230648171730724 19 18.64534351087002 27.694126502016626 27.98816253140883 25.672367455704524 20 21.288056473164225 26.37257995233081 34.03196192547032 18.30740164903464 21 20.35957166154115 32.99399763554738 28.135085511835566 18.5113451910759 22 18.094524885673774 23.286627157753088 31.713886027301445 26.9049619292717 23 18.680126053454877 30.616810421838114 29.21011316680795 21.49295035789906 24 21.567457225075362 25.014730311750416 27.874501545257218 25.543310917917 25 17.24776954569818 34.510744574493565 26.18251141361575 22.05897446619251 26 17.02957086325329 25.31446839730407 30.10514591561717 27.55081482382547 27 21.824429889418123 29.064900803229644 25.888665452762265 23.222003854589964 28 15.76694556056914 26.20874087195843 33.120393213792894 24.90392035367954 29 21.101409168146034 21.87688880610348 28.489943473616584 28.5317585521339 30 18.553920543748077 31.915548746878127 29.339169704595474 20.191361004778326 31 23.614115249959138 24.28809828824274 22.723834214617792 29.373952247180334 32 26.248085059472448 30.302246990264692 22.58451397573965 20.865153974523214 33 20.793498135427633 25.45568932156936 26.30206452446752 27.448748018535486 34 25.438583153085006 23.56108612765763 25.20099747969118 25.799333239566185 35 19.93685923143886 30.50619053230595 24.87845116949172 24.678499066763475 36 19.228093650570397 29.426791300943123 23.930009161303566 27.415105887182918 37 22.06163542573452 29.367870053941452 28.68381338310595 19.886681137218083 38 18.715668870194595 26.854593766512203 25.934471970592593 28.49526539270061 39 28.42132873114045 24.67222680498588 25.84761064839981 21.05883381547386 40 20.326119598727303 26.122829892459222 31.13949890330453 22.411551605508947 41 21.893044631894263 29.702010545002526 23.526493653611492 24.87845116949172 42 19.420443011750038 28.4371044198538 29.854825650129435 22.287626918266724 43 21.999292945035982 27.449698361229057 24.72639633851967 25.824612355215294 44 21.264107837286126 24.205228405362973 29.242234749850798 25.288429007500106 45 19.878318121514617 23.039538057423506 26.804225603752712 30.277918217309164 46 27.935893683262186 26.61301665380536 24.48120792357724 20.969881739355213 47 17.377396289101853 24.45725928769914 36.0470685729274 22.11827585027161 48 22.154959078243614 26.506388203586212 25.679019854559552 25.659632863610614 49 20.11723427467945 21.34545717185617 34.356028783979504 24.181279769484874 50 22.54764067922893 21.99625184841654 29.718736576409455 25.737370895945077 51 20.308063087549368 22.371637212378783 26.01506103100778 31.305238669064067 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 153.0 1 276.5 2 400.0 3 1310.0 4 2220.0 5 1559.5 6 899.0 7 927.5 8 956.0 9 914.5 10 873.0 11 903.5 12 934.0 13 963.0 14 992.0 15 996.0 16 1000.0 17 1003.0 18 1006.0 19 1099.5 20 1193.0 21 1334.5 22 1476.0 23 1544.0 24 1612.0 25 1908.5 26 2625.0 27 3045.0 28 3950.0 29 4855.0 30 5622.5 31 6390.0 32 7265.0 33 8140.0 34 9640.0 35 11140.0 36 12992.0 37 14844.0 38 15776.0 39 16708.0 40 19327.5 41 21947.0 42 25975.0 43 30003.0 44 34507.5 45 39012.0 46 72869.5 47 106727.0 48 82158.5 49 57590.0 50 57140.0 51 56690.0 52 47172.5 53 37655.0 54 33000.0 55 28345.0 56 24398.5 57 20452.0 58 17375.0 59 14298.0 60 12741.5 61 11185.0 62 9437.0 63 7689.0 64 6739.0 65 5789.0 66 4445.5 67 3102.0 68 2505.5 69 1909.0 70 1497.0 71 1085.0 72 808.5 73 532.0 74 531.5 75 408.0 76 285.0 77 204.0 78 123.0 79 104.5 80 86.0 81 58.5 82 31.0 83 21.0 84 11.0 85 7.0 86 3.0 87 1.5 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 2.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 526126.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.181011031148596 #Duplication Level Percentage of deduplicated Percentage of total 1 73.43368833396111 22.897366459991694 2 11.222172795418846 6.998373874548215 3 4.209671976259513 3.9378548498779504 4 2.0173277828108622 2.5160927939707216 5 1.1875325034930386 1.8514232045631975 6 0.7961473811649827 1.4894808164715234 7 0.6055698056506907 1.3217595153087291 8 0.49012612953172163 1.2226102601266224 9 0.3785028243830033 1.0621890668166596 >10 5.491691762854203 38.02952281039819 >50 0.12170135835741727 2.3512327301778257 >100 0.03302448920251524 1.7682871943989442 >500 0.004892516918891148 1.0383181034726896 >1k 0.006115646148613933 4.661085289840762 >5k 0.0 0.0 >10k+ 0.0018346938445841802 8.854403030036252 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGC 17438 3.314415178113227 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCG 14841 2.8208071830702153 No Hit GAATCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTC 14154 2.6902300969729684 No Hit GCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 4930 0.937037895865249 No Hit GAATGACTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCT 3173 0.6030874733428875 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCACGTGAAT 2897 0.5506285566575307 No Hit GAACTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCT 2586 0.49151724111714684 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCACGTGAATCGTA 2462 0.46794874231647937 No Hit GAATGCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTT 2442 0.4641473715421781 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTC 2427 0.46129634346145215 No Hit CCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 1379 0.26210451488806863 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1120 0.21287676336086792 No Hit CTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGCT 1027 0.19520038926036729 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGC 868 0.16497949160467265 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATG 771 0.14654284334931178 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCG 758 0.14407195234601597 No Hit GAATATGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTC 678 0.12886646924881112 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCACGTGAATCGT 643 0.12221407039378399 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCACGTGAATCGTAT 632 0.12012331646791834 No Hit TCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 565 0.10738872437400927 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCACGTGAA 530 0.10073632551898214 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.21078600943500225 0.0 2 0.0 0.0 0.0 1.6908497204091795 0.0 3 0.0 0.0 0.0 2.0669953585262846 0.0 4 0.0 0.0 0.0 3.023610313879185 0.0 5 0.0 0.0 0.0 6.979696878694457 0.0 6 0.0 0.0 0.0 8.213241694955201 0.0 7 0.0 0.0 0.0 9.57508277484861 0.0 8 0.0 0.0 0.0 11.18667391461361 0.0 9 0.0 0.0 0.0 11.559018181956413 0.0 10 0.0 0.0 0.0 15.519856460239563 0.0 11 0.0 0.0 0.0 16.923132481572853 0.0 12 0.0 0.0 0.0 21.663061700049038 0.0 13 0.0 0.0 0.0 22.30397281259622 0.0 14 0.0 0.0 0.0 22.630320493569982 0.0 15 0.0 0.0 0.0 23.48847994586848 0.0 16 0.0 0.0 0.0 24.362985292496475 0.0 17 0.0 0.0 0.0 25.337276621949876 0.0 18 0.0 0.0 0.0 26.29180082337691 0.0 19 0.0 0.0 0.0 27.530667558721674 0.0 20 0.0 0.0 0.0 28.18925504536936 0.0 21 0.0 0.0 0.0 28.889087404918214 0.0 22 1.9006853871506065E-4 0.0 0.0 29.68851567875376 0.0 23 1.9006853871506065E-4 0.0 0.0 30.44650901114942 0.0 24 1.9006853871506065E-4 0.0 0.0 31.02070606660762 0.0 25 1.9006853871506065E-4 0.0 0.0 31.552137700854928 0.0 26 1.9006853871506065E-4 0.0 0.0 32.07748714186336 0.0 27 1.9006853871506065E-4 0.0 0.0 32.630016383908035 0.0 28 1.9006853871506065E-4 0.0 0.0 33.14263123282256 0.0 29 1.9006853871506065E-4 0.0 0.0 33.616662168377914 0.0 30 1.9006853871506065E-4 0.0 0.0 34.19504073168785 0.0 31 5.702056161451819E-4 0.0 0.0 34.69758194805047 0.0 32 5.702056161451819E-4 0.0 0.0 35.197652273409794 0.0 33 5.702056161451819E-4 0.0 0.0 35.684988006675205 0.0 34 5.702056161451819E-4 0.0 0.0 36.18372785226352 0.0 35 5.702056161451819E-4 0.0 0.0 36.69938379779749 0.0 36 7.602741548602426E-4 0.0 0.0 37.17645582997229 0.0 37 9.503426935753033E-4 0.0 0.0 37.66721279693458 0.0 38 9.503426935753033E-4 0.0 0.0 38.16044065490016 0.0 39 9.503426935753033E-4 0.0 0.0 38.686170232986015 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATACGA 25 3.887911E-5 45.000004 9 TAAAGCG 20 7.0297945E-4 45.000004 1 CTGAGCG 20 7.0297945E-4 45.000004 1 ATTACGG 25 3.887911E-5 45.000004 2 TTCACGG 25 3.887911E-5 45.000004 2 TTTCACG 20 7.0297945E-4 45.000004 1 TATTGCG 20 7.0297945E-4 45.000004 1 ATCCGGC 40 6.8030204E-9 45.000004 6 ACGGCCG 20 7.0297945E-4 45.000004 30 TACGATG 20 7.0297945E-4 45.000004 1 CGTAAGG 20 7.0297945E-4 45.000004 2 GTAAGCG 25 3.887911E-5 45.000004 1 CGATCTA 20 7.0297945E-4 45.000004 43 AATCGTG 20 7.0297945E-4 45.000004 27 TGCGTTC 20 7.0297945E-4 45.000004 14 TCACGTT 20 7.0297945E-4 45.000004 44 GCGAGCC 20 7.0297945E-4 45.000004 33 CTACGAA 35 1.2102464E-7 45.0 11 TAATCCG 35 1.2102464E-7 45.0 4 CGCGCGG 30 2.1632495E-6 44.999996 2 >>END_MODULE