##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935903.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 353924 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.78317096325765 31.0 31.0 34.0 30.0 34.0 2 31.8149800522146 33.0 31.0 34.0 30.0 34.0 3 31.867465896633174 33.0 31.0 34.0 30.0 34.0 4 35.60076457092483 37.0 35.0 37.0 33.0 37.0 5 33.498146494727685 37.0 35.0 37.0 32.0 37.0 6 34.48336083452945 37.0 35.0 37.0 30.0 37.0 7 35.582950011866956 37.0 35.0 37.0 32.0 37.0 8 35.56217436511793 37.0 35.0 37.0 33.0 37.0 9 37.45386580169754 39.0 37.0 39.0 35.0 39.0 10 37.02933398130672 39.0 37.0 39.0 33.0 39.0 11 37.02762740023282 39.0 37.0 39.0 33.0 39.0 12 36.919564652298234 39.0 35.0 39.0 33.0 39.0 13 36.74277528508946 39.0 35.0 39.0 33.0 39.0 14 37.76861699121845 40.0 36.0 41.0 33.0 41.0 15 37.84855223155254 40.0 36.0 41.0 33.0 41.0 16 37.92414190617195 40.0 36.0 41.0 33.0 41.0 17 37.902391473875745 40.0 36.0 41.0 33.0 41.0 18 37.89937952780823 39.0 36.0 41.0 33.0 41.0 19 37.82164249951967 39.0 36.0 41.0 33.0 41.0 20 37.81828019574824 40.0 36.0 41.0 33.0 41.0 21 37.76785694103819 39.0 36.0 41.0 33.0 41.0 22 37.850727839875226 39.0 36.0 41.0 33.0 41.0 23 37.83114736497101 39.0 36.0 41.0 34.0 41.0 24 37.77297950972525 39.0 36.0 41.0 33.0 41.0 25 37.612495903075235 39.0 35.0 41.0 33.0 41.0 26 37.64330195183147 39.0 35.0 41.0 33.0 41.0 27 37.63304551259593 39.0 35.0 41.0 33.0 41.0 28 37.55876120297013 39.0 36.0 41.0 33.0 41.0 29 37.546391315649686 39.0 36.0 41.0 33.0 41.0 30 37.38162430352279 39.0 36.0 41.0 33.0 41.0 31 37.37758106260101 39.0 35.0 41.0 33.0 41.0 32 37.264172534216385 39.0 35.0 41.0 33.0 41.0 33 37.149800522145995 39.0 35.0 41.0 32.0 41.0 34 37.07992393847267 39.0 35.0 41.0 32.0 41.0 35 37.05266102327053 39.0 35.0 41.0 32.0 41.0 36 36.95345045829048 39.0 35.0 41.0 32.0 41.0 37 36.94714401962003 39.0 35.0 41.0 32.0 41.0 38 36.825035883409996 39.0 35.0 41.0 31.0 41.0 39 36.81566946576101 39.0 35.0 41.0 31.0 41.0 40 36.68879759496389 39.0 35.0 41.0 31.0 41.0 41 36.61976299996609 39.0 35.0 41.0 31.0 41.0 42 36.69196776709124 39.0 35.0 41.0 31.0 41.0 43 36.636667759179936 39.0 35.0 41.0 31.0 41.0 44 36.516068421469015 39.0 35.0 41.0 31.0 41.0 45 36.47981770097535 39.0 35.0 40.0 31.0 41.0 46 36.35349397045693 39.0 35.0 40.0 31.0 41.0 47 36.21460257004328 38.0 35.0 40.0 30.0 41.0 48 36.188017766526144 38.0 35.0 40.0 30.0 41.0 49 36.16768854330308 38.0 35.0 40.0 30.0 41.0 50 36.02050440207502 38.0 35.0 40.0 30.0 41.0 51 34.74901956352211 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 4.0 9 6.0 10 2.0 11 7.0 12 2.0 13 7.0 14 5.0 15 19.0 16 18.0 17 31.0 18 74.0 19 156.0 20 343.0 21 543.0 22 821.0 23 1141.0 24 1607.0 25 2131.0 26 2724.0 27 3214.0 28 3779.0 29 4415.0 30 5721.0 31 7359.0 32 10060.0 33 14274.0 34 24522.0 35 33317.0 36 27900.0 37 41760.0 38 69999.0 39 97913.0 40 49.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.72316090460099 19.109752376216363 22.91198110328771 13.255105615894939 2 29.30657429278602 29.415637255455973 24.163662255173428 17.11412619658458 3 29.800183090154945 27.593777195104035 26.363852126445224 16.242187588295792 4 27.715554751867632 23.559577762457476 30.228523637843153 18.496343847831735 5 25.383133102021905 31.21997943061222 23.861337462280037 19.535550005085838 6 22.347735672065188 36.25552378476735 25.758354901052204 15.638385642115257 7 74.48293984019168 5.316113063821612 14.908567941139905 5.292379154846803 8 74.1690306393463 8.101739356472011 10.654264757405544 7.074965246776143 9 69.43948418304495 5.942236186299884 12.64791311128943 11.97036651936574 10 39.68959437619376 22.449452424814368 20.415117369830813 17.445835829161062 11 31.184096020614593 23.13293249398176 25.6148212610617 20.06815022434195 12 27.0863236174998 19.94637266757835 31.123348515500503 21.843955199421345 13 23.544037703009685 24.89545778189668 33.59619579344718 17.964308721646454 14 19.774584374046405 30.045150936359217 28.453001209299174 21.727263480295207 15 16.671093229054826 24.28770018422034 39.41580678337722 19.625399803347612 16 18.218318056983986 24.586916965224173 32.664639866185965 24.530125111605884 17 18.103604163605745 23.536974039624326 31.01739356472011 27.34202823204982 18 19.58217018342921 24.30437042980979 32.46968275675003 23.64377663001096 19 20.354652411252133 25.940032323323653 28.75137035069676 24.953944914727455 20 22.43023926040619 25.54305444106644 30.763384229382577 21.263322069144788 21 20.867191826493823 28.68355918219731 29.989771815418 20.459477175890868 22 18.255614199658684 24.68298278726506 29.058498434692194 28.002904578384058 23 17.98465207219629 28.291384591042146 29.15936754783513 24.564595788926436 24 21.643629705812547 24.208022061233486 29.197511330116072 24.950836902837896 25 17.47663340152123 29.68010081260384 28.02861631310677 24.814649472768167 26 17.593042574111955 27.676280783445034 29.940326171720482 24.790350470722526 27 22.323719216554966 27.272804330873296 27.63785445462868 22.76562199794306 28 17.3523129259389 26.27795797967925 31.375945118160963 24.993783976220886 29 20.586905663362757 25.44020750217561 28.948305285880583 25.024581548581047 30 22.785117708886656 27.87180298595179 28.069303014206437 21.27377629095512 31 22.698093375979024 26.877521727828572 24.727060046789706 25.697324849402698 32 25.27067958092698 29.991467094630487 23.244820922005854 21.493032402436683 33 22.503136266543102 26.960307862704987 23.85822945039048 26.67832642036143 34 19.90512087340785 26.719578214531936 28.938416157141084 24.436884754919134 35 20.853629592793933 27.763587662888078 25.972242628360892 25.410540115957097 36 21.82248166272985 27.410121947084686 26.256201896452346 24.511194493733118 37 23.588680055605156 24.44564369751698 29.07121302878584 22.89446321809202 38 19.870085103016464 28.895186537222678 23.756230151105886 27.478498208654965 39 21.94821487098925 25.49389134390434 28.825962636046153 23.73193114906025 40 21.06412676167765 26.922729173494876 29.87675320125225 22.13639086357523 41 18.107842361636962 26.134424339688746 27.49347317503193 28.264260123642366 42 20.9669307534951 25.889739040019894 27.837049762095816 25.30628044438919 43 23.186616335710493 23.427345983883548 26.470372170296447 26.915665510109516 44 21.4187226636227 24.713780359625233 27.225619059459095 26.641877917292977 45 20.775929295554977 23.701698669770913 26.645551022253365 28.876821012420745 46 24.716605824979375 25.354030808874224 27.3259230795312 22.603440286615207 47 18.65004916309716 24.161119336354698 33.09128513466168 24.097546365886462 48 20.508640273052972 24.610933420734398 27.764717849029736 27.115708457182897 49 20.91918038901007 20.56260666131712 32.88502616380918 25.633186785863632 50 21.302030944496558 21.370407206066837 30.847300550400654 26.480261299035952 51 19.875170940653923 22.111526768458763 26.80632000090415 31.20698228998316 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 212.0 1 334.5 2 457.0 3 1071.0 4 1685.0 5 1177.0 6 669.0 7 682.0 8 695.0 9 749.0 10 803.0 11 821.5 12 840.0 13 871.0 14 902.0 15 876.5 16 851.0 17 826.0 18 801.0 19 742.0 20 683.0 21 807.5 22 932.0 23 974.0 24 1016.0 25 1216.5 26 1571.0 27 1725.0 28 2143.0 29 2561.0 30 3138.0 31 3715.0 32 4174.5 33 4634.0 34 5484.0 35 6334.0 36 7181.5 37 8029.0 38 9419.0 39 10809.0 40 12132.5 41 13456.0 42 16280.5 43 19105.0 44 23094.0 45 27083.0 46 40326.5 47 53570.0 48 49111.0 49 44652.0 50 43907.5 51 43163.0 52 35778.5 53 28394.0 54 24305.5 55 20217.0 56 17499.0 57 14781.0 58 12970.5 59 11160.0 60 9984.5 61 8809.0 62 8042.5 63 7276.0 64 6076.5 65 4877.0 66 3651.5 67 2426.0 68 2074.0 69 1722.0 70 1623.5 71 1525.0 72 1175.0 73 825.0 74 694.5 75 399.5 76 235.0 77 213.0 78 191.0 79 127.0 80 63.0 81 51.5 82 40.0 83 23.5 84 7.0 85 7.0 86 7.0 87 4.5 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 353924.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.725569262077094 #Duplication Level Percentage of deduplicated Percentage of total 1 66.49191468794918 19.765100154247545 2 14.298160952825741 8.500419474470956 3 5.652774025366242 5.040957774416838 4 2.765029479729255 3.287683012455079 5 1.6002640983589154 2.3784380646691647 6 1.034835980912648 1.8456653175305044 7 0.7422750563311625 1.5445184018938907 8 0.5631710011226576 1.3392462880211886 9 0.48158041953024167 1.2883726904405712 >10 6.109304122669111 41.48494173100223 >50 0.1960151317380359 3.6083892778532314 >100 0.051740034773491705 2.666658830256126 >500 0.0069650046810469605 1.6580844501348537 >1k 0.004975003343604972 4.111789159075052 >5k 9.950006687209944E-4 1.4797353735327636 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGC 5003 1.4135803166781569 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTC 4254 1.2019529616527842 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCG 4114 1.1623964466947707 No Hit GCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 2845 0.8038448932539188 TruSeq Adapter, Index 23 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 1632 0.4611159457962727 TruSeq Adapter, Index 23 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGCT 1057 0.29865168793300256 TruSeq Adapter, Index 20 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 967 0.2732224997457081 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCT 961 0.2715272205332218 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCGATACT 793 0.22405940258360554 No Hit GAACTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCT 766 0.2164306461274172 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCGATACTCGTA 720 0.2034335054983556 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTC 705 0.19919530746713981 No Hit TCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 694 0.19608729557758164 TruSeq Adapter, Index 23 (95% over 21bp) GAATGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTT 493 0.1392954419592907 No Hit ACTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTGC 413 0.11669171912614007 TruSeq Adapter, Index 20 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCAGCGATACTCGTATGCCGTCTTCTG 373 0.10538985770956477 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.8254653541438275E-4 0.0 0.0 0.3147568404516224 0.0 2 2.8254653541438275E-4 0.0 0.0 1.9716097241215629 0.0 3 2.8254653541438275E-4 0.0 0.0 2.553655587075191 0.0 4 2.8254653541438275E-4 0.0 0.0 3.4795605836281234 0.0 5 2.8254653541438275E-4 0.0 0.0 6.5177834789389815 0.0 6 2.8254653541438275E-4 0.0 0.0 7.903674235146529 0.0 7 2.8254653541438275E-4 0.0 0.0 9.386195906465796 0.0 8 2.8254653541438275E-4 0.0 0.0 11.525920819158916 0.0 9 2.8254653541438275E-4 0.0 0.0 12.226071133915756 0.0 10 2.8254653541438275E-4 0.0 0.0 14.978356935387259 0.0 11 2.8254653541438275E-4 0.0 0.0 17.09943377674303 0.0 12 2.8254653541438275E-4 0.0 0.0 20.297295464563014 0.0 13 2.8254653541438275E-4 0.0 0.0 21.105378555848148 0.0 14 2.8254653541438275E-4 0.0 0.0 21.43680564188922 0.0 15 2.8254653541438275E-4 0.0 0.0 22.13695595664606 0.0 16 2.8254653541438275E-4 0.0 0.0 23.24058272397464 0.0 17 2.8254653541438275E-4 0.0 0.0 24.52419163436218 0.0 18 2.8254653541438275E-4 0.0 0.0 25.988065234344095 0.0 19 2.8254653541438275E-4 0.0 0.0 27.02868412427527 0.0 20 5.650930708287655E-4 0.0 0.0 27.807664922412723 0.0 21 5.650930708287655E-4 0.0 0.0 28.699099241645097 0.0 22 5.650930708287655E-4 0.0 0.0 29.644499949141622 0.0 23 5.650930708287655E-4 0.0 0.0 30.615329844825443 0.0 24 5.650930708287655E-4 0.0 0.0 31.32875984674676 0.0 25 5.650930708287655E-4 0.0 0.0 31.963359365287463 0.0 26 5.650930708287655E-4 0.0 0.0 32.564335846113856 0.0 27 8.476396062431482E-4 0.0 0.0 33.16474723386942 0.0 28 8.476396062431482E-4 0.0 0.0 33.756964772097966 0.0 29 8.476396062431482E-4 0.0 0.0 34.36867802127011 0.0 30 8.476396062431482E-4 0.0 0.0 35.09114951232468 0.0 31 0.001130186141657531 0.0 0.0 35.71981555362168 0.0 32 0.001130186141657531 0.0 0.0 36.3272906047626 0.0 33 0.001130186141657531 0.0 0.0 36.94663261039093 0.0 34 0.001130186141657531 0.0 0.0 37.51116058814887 0.0 35 0.0014127326770719138 0.0 0.0 38.11694036007731 0.0 36 0.0014127326770719138 0.0 0.0 38.6845763497248 0.0 37 0.0014127326770719138 0.0 0.0 39.26464438693053 0.0 38 0.0014127326770719138 0.0 0.0 39.785377651699235 0.0 39 0.0014127326770719138 0.0 0.0 40.337191035363524 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGTCGC 30 2.1612286E-6 45.000004 38 ATCGTGA 30 2.1612286E-6 45.000004 30 GTTGTCG 30 2.1612286E-6 45.000004 37 CTACGAA 30 2.1612286E-6 45.000004 11 TTGACGG 65 0.0 45.000004 2 CGAATGG 30 2.1612286E-6 45.000004 2 TTCGGGC 30 2.1612286E-6 45.000004 4 GAACCGC 30 2.1612286E-6 45.000004 9 GCTACGA 30 2.1612286E-6 45.000004 10 CTAGGCG 30 2.1612286E-6 45.000004 1 CTTCGTA 20 7.0266635E-4 45.0 19 CTCACGA 20 7.0266635E-4 45.0 24 GCGCGCC 20 7.0266635E-4 45.0 16 GACGTTG 20 7.0266635E-4 45.0 1 TGGCGTG 20 7.0266635E-4 45.0 1 TAGCGGT 20 7.0266635E-4 45.0 40 CGCGCCT 20 7.0266635E-4 45.0 17 CCTCGAT 40 6.7921064E-9 45.0 15 TCAGGTC 20 7.0266635E-4 45.0 19 CTGCGGT 20 7.0266635E-4 45.0 15 >>END_MODULE