##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935901.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 607341 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.709382373328985 31.0 31.0 34.0 30.0 34.0 2 31.75669187491047 31.0 31.0 34.0 30.0 34.0 3 31.77866799705602 33.0 31.0 34.0 30.0 34.0 4 35.530417014494326 37.0 35.0 37.0 33.0 37.0 5 33.674923971870825 37.0 35.0 37.0 32.0 37.0 6 34.49264745834712 37.0 35.0 37.0 30.0 37.0 7 35.51326190723169 37.0 35.0 37.0 32.0 37.0 8 35.39566240382256 37.0 35.0 37.0 33.0 37.0 9 37.27850746121207 39.0 37.0 39.0 34.0 39.0 10 36.86282500275792 39.0 37.0 39.0 32.0 39.0 11 36.84172318351634 39.0 37.0 39.0 32.0 39.0 12 36.92090604783804 39.0 37.0 39.0 33.0 39.0 13 36.84483016954232 39.0 37.0 39.0 33.0 39.0 14 37.97518198178618 40.0 37.0 41.0 33.0 41.0 15 37.913585613353945 40.0 37.0 41.0 33.0 41.0 16 38.05864086238209 40.0 37.0 41.0 33.0 41.0 17 37.90650227796246 40.0 37.0 41.0 33.0 41.0 18 37.8806403651326 39.0 37.0 41.0 33.0 41.0 19 37.77839796753389 39.0 37.0 41.0 33.0 41.0 20 37.57019532684274 39.0 36.0 41.0 32.0 41.0 21 37.739365529414286 39.0 36.0 41.0 33.0 41.0 22 37.817479801297786 40.0 36.0 41.0 33.0 41.0 23 37.76342120818453 40.0 36.0 41.0 33.0 41.0 24 37.74169371078192 40.0 36.0 41.0 33.0 41.0 25 37.65946807477183 39.0 36.0 41.0 33.0 41.0 26 37.5912987926058 39.0 36.0 41.0 33.0 41.0 27 37.56914155309785 40.0 36.0 41.0 33.0 41.0 28 37.50838820366153 40.0 36.0 41.0 33.0 41.0 29 37.45489436741468 40.0 36.0 41.0 33.0 41.0 30 37.4054427413924 39.0 36.0 41.0 33.0 41.0 31 37.33628554634053 40.0 36.0 41.0 32.0 41.0 32 37.13523045537845 40.0 36.0 41.0 32.0 41.0 33 37.0241495304944 40.0 36.0 41.0 31.0 41.0 34 36.87086332060572 40.0 36.0 41.0 31.0 41.0 35 36.74746970812114 40.0 36.0 41.0 31.0 41.0 36 36.62256952848564 40.0 35.0 41.0 30.0 41.0 37 36.58302996175131 39.0 35.0 41.0 30.0 41.0 38 36.45055084375993 39.0 35.0 41.0 30.0 41.0 39 36.426472113689016 39.0 35.0 41.0 30.0 41.0 40 36.286303740402836 39.0 35.0 41.0 30.0 41.0 41 36.21463560009945 39.0 35.0 41.0 29.0 41.0 42 36.26269756199565 39.0 35.0 41.0 30.0 41.0 43 36.16838316530582 39.0 35.0 41.0 30.0 41.0 44 36.157338299242106 39.0 35.0 41.0 29.0 41.0 45 36.15422308060875 39.0 35.0 41.0 29.0 41.0 46 35.983067173136675 39.0 35.0 40.0 28.0 41.0 47 35.80913687697686 39.0 35.0 40.0 28.0 41.0 48 35.79796028919503 39.0 35.0 40.0 27.0 41.0 49 35.75138184314907 39.0 35.0 40.0 27.0 41.0 50 35.554505623694105 39.0 35.0 40.0 26.0 41.0 51 34.27471881529487 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 7.0 10 8.0 11 6.0 12 1.0 13 8.0 14 10.0 15 14.0 16 25.0 17 64.0 18 154.0 19 495.0 20 1135.0 21 2134.0 22 3116.0 23 3717.0 24 4370.0 25 5379.0 26 6554.0 27 6870.0 28 7166.0 29 7731.0 30 9439.0 31 12679.0 32 16687.0 33 23574.0 34 34839.0 35 46417.0 36 48554.0 37 70414.0 38 120590.0 39 175116.0 40 68.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 49.53823305194282 17.546650069730184 18.620840680935423 14.29427619739158 2 27.32962207392552 35.17858995193804 22.18572432949529 15.30606364464115 3 25.718006852822384 34.902797604640554 25.709938897588007 13.66925664494905 4 23.384391964316585 21.986659882998183 38.10396465906303 16.5249834936222 5 29.382011094261706 29.053694711866974 23.922969139247968 17.64132505462335 6 21.270752345058213 37.64968938372348 26.731934777991277 14.347623493227035 7 71.42346721199459 3.9457240660518553 20.156057305533466 4.4747514164201005 8 69.70268761700594 11.460448084354589 12.387439675569409 6.449424623070072 9 64.91377990288815 5.528854465613222 13.076014957001092 16.481350674497524 10 36.35371232964677 26.691101045376485 21.711526144291263 15.243660480685481 11 27.31743781500014 22.84301570287532 29.86888749483404 19.970658987290502 12 21.087000548291652 19.874666785216213 34.563943484796845 24.47438918169529 13 21.728320663350573 24.133888540375175 38.72832560291501 15.409465193359251 14 19.16979094116814 32.09860687817881 28.928394427512714 19.803207753140327 15 15.508256481943421 25.621685346452814 39.77337278398791 19.096685387615853 16 17.802190202867912 27.185222140444985 29.361264923659032 25.65132273302807 17 17.895712622727594 28.07154465119266 31.15021050777076 22.88253221830899 18 18.92775228413692 25.63880916980741 31.753825281020053 23.679613265035623 19 18.25531291317398 27.973082666903764 28.7243904165864 25.047214003335856 20 21.380246023239007 27.230336828898427 33.56121190566749 17.82820524219508 21 19.157935986538043 31.95272507536952 30.9215086746984 17.967830263394042 22 17.788359422466126 23.085877620644744 32.96599439194785 26.159768564941277 23 18.320515163639538 29.692545044711288 31.28785970319804 20.699080088451133 24 20.6216935790602 26.378591269155223 29.398311656878096 23.601403494906485 25 16.506871757381766 35.062674839999275 27.056134856695003 21.374318545923956 26 18.066621551978212 27.56128764565541 30.533588214857883 23.8385025875085 27 22.39186881834093 29.10210244327322 26.5052087706906 22.000819967695247 28 15.545138563014845 28.990138982877824 33.02856220805116 22.43616024605617 29 18.41255571417046 27.937517803013463 29.535631548010095 24.114294934805983 30 18.98142888426765 32.76478946753142 29.348751360438367 18.905030287762557 31 19.77505223589384 25.986554505623694 28.637289430484685 25.60110382799778 32 21.52085895732381 29.408520090031793 26.348295273989407 22.72232567865499 33 23.628077142824214 24.653366066180286 25.26422553392575 26.454331257069754 34 19.749037196566675 26.255760767015563 28.236855407423505 25.758346628994254 35 19.012548140171667 26.605646580751174 29.326194016211648 25.055611262865508 36 23.470834341827736 28.797660622286326 27.79986860758618 19.931636428299754 37 17.533971854361884 26.99043864978653 31.685823944044618 23.789765551806973 38 21.6744794110722 24.548976604576342 29.20517468769604 24.57136929665542 39 23.921816574214485 22.667331861343136 27.086266199713176 26.324585364729202 40 22.765958497779664 23.527474680616 31.699490072298758 22.00707674930558 41 20.30177445619512 26.96771665341217 26.207188383461677 26.523320506931032 42 20.607533494363135 23.733125213018717 34.09830721127011 21.56103408134804 43 26.17261143245722 24.10770884890037 26.858387627379017 22.86129209126339 44 20.821251982000227 23.876043277170485 29.07855718616066 26.22414755466863 45 19.743932979989825 21.763720875093234 28.448598069288916 30.043748075628024 46 26.261194287887697 24.99337275105748 26.472278341162543 22.273154619892285 47 18.18945205411787 23.584608975847175 36.147073884358214 22.078865085676743 48 20.728223518583462 24.373128110896513 28.69903398584979 26.199614384670227 49 20.352487317668327 20.430367783502184 36.11941232355464 23.097732575274847 50 21.915036198774658 20.794084377639578 31.601686696600428 25.689192726985333 51 19.746238110056787 21.267129997810127 27.361235286272457 31.62539660586063 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 158.0 1 312.0 2 466.0 3 2749.5 4 5033.0 5 3509.5 6 1986.0 7 1973.5 8 1961.0 9 2009.0 10 2057.0 11 2070.5 12 2084.0 13 2092.5 14 2101.0 15 2000.5 16 1900.0 17 1830.5 18 1761.0 19 1800.0 20 1839.0 21 1922.0 22 2005.0 23 2207.5 24 2410.0 25 2779.5 26 3888.5 27 4628.0 28 5643.0 29 6658.0 30 7293.0 31 7928.0 32 9506.5 33 11085.0 34 12985.5 35 14886.0 36 16129.5 37 17373.0 38 20021.0 39 22669.0 40 25095.5 41 27522.0 42 30576.0 43 33630.0 44 39455.5 45 45281.0 46 82225.5 47 119170.0 48 94598.0 49 70026.0 50 68370.5 51 66715.0 52 54348.0 53 41981.0 54 36184.0 55 30387.0 56 24966.0 57 19545.0 58 16797.5 59 14050.0 60 11697.0 61 9344.0 62 8123.0 63 6902.0 64 5149.5 65 3397.0 66 2728.5 67 2060.0 68 1607.5 69 1155.0 70 955.5 71 756.0 72 622.0 73 488.0 74 444.0 75 309.0 76 218.0 77 153.5 78 89.0 79 62.5 80 36.0 81 30.0 82 24.0 83 20.5 84 17.0 85 9.5 86 2.0 87 2.0 88 2.0 89 1.0 90 0.0 91 1.5 92 3.0 93 3.5 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 607341.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.23069584041575 #Duplication Level Percentage of deduplicated Percentage of total 1 75.2095438456888 28.001036512152517 2 10.522380674515956 7.8351110881994455 3 4.0293940430923225 4.5005143211866 4 2.025731581753651 3.0167758549837784 5 1.2493106980521005 2.3256353304677613 6 0.9007846343658575 2.012210324387721 7 0.7031302393310777 1.8324619653713858 8 0.5780773954402707 1.7217778945485163 9 0.48633480481998737 1.6295924875374814 >10 4.17170580041324 29.395343834456217 >50 0.08063205527064427 1.9277048462332174 >100 0.03322749530109423 2.1673690149564826 >500 0.0035442661654500507 0.8400616737574859 >1k 0.003987299436131307 3.4757077536653727 >5k 8.860665413625127E-4 1.8127386205762361 >10k+ 0.001329099812043769 7.505958477519763 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTC 19204 3.1619798432840858 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGC 14096 2.320936673137496 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCG 12206 2.009744114097352 No Hit GAACTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCT 5518 0.9085505506791078 No Hit GCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGC 5472 0.9009765518876546 TruSeq Adapter, Index 13 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCT 3173 0.5224412644626331 No Hit GAATGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTT 2899 0.4773265760091942 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTC 2775 0.4569097097017985 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2707 0.4457133636622589 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAATCGCTGT 2616 0.43073001822699275 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAATCGCTGTCGTA 2251 0.3706319843382877 No Hit CCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGC 2055 0.3383601634007913 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGCT 1572 0.2588331760905323 TruSeq Adapter, Index 16 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTG 1024 0.16860379918365465 No Hit GAATATGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTC 815 0.13419150032683452 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATG 727 0.1197021113344892 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAATCGCTGTCGT 667 0.10982298247607192 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGC 628 0.1034015487181007 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6465214764028774E-4 0.0 0.0 0.27990865098848916 0.0 2 1.6465214764028774E-4 0.0 0.0 1.7907567577357695 0.0 3 1.6465214764028774E-4 0.0 0.0 2.2842192442137117 0.0 4 1.6465214764028774E-4 0.0 0.0 3.7581852698895677 0.0 5 1.6465214764028774E-4 0.0 0.0 8.321190237444862 0.0 6 1.6465214764028774E-4 0.0 0.0 9.845704472446286 0.0 7 1.6465214764028774E-4 0.0 0.0 11.349307884697394 0.0 8 1.6465214764028774E-4 0.0 0.0 13.324639699937926 0.0 9 1.6465214764028774E-4 0.0 0.0 13.937145689159797 0.0 10 1.6465214764028774E-4 0.0 0.0 17.309550977128172 0.0 11 1.6465214764028774E-4 0.0 0.0 18.997070838293478 0.0 12 1.6465214764028774E-4 0.0 0.0 22.883849435490113 0.0 13 1.6465214764028774E-4 0.0 0.0 23.67286252698237 0.0 14 1.6465214764028774E-4 0.0 0.0 24.052715031588516 0.0 15 1.6465214764028774E-4 0.0 0.0 24.83876438442325 0.0 16 1.6465214764028774E-4 0.0 0.0 25.753736368860327 0.0 17 1.6465214764028774E-4 0.0 0.0 26.867608147646873 0.0 18 1.6465214764028774E-4 0.0 0.0 27.982797143614544 0.0 19 1.6465214764028774E-4 0.0 0.0 29.175701953268426 0.0 20 1.6465214764028774E-4 0.0 0.0 29.900006750738054 0.0 21 1.6465214764028774E-4 0.0 0.0 30.706966926323105 0.0 22 1.6465214764028774E-4 0.0 0.0 31.58620939472224 0.0 23 1.6465214764028774E-4 0.0 0.0 32.4675923410407 0.0 24 3.293042952805755E-4 0.0 0.0 33.10578406529446 0.0 25 3.293042952805755E-4 0.0 0.0 33.65835667277526 0.0 26 3.293042952805755E-4 0.0 0.0 34.20681297656506 0.0 27 3.293042952805755E-4 0.0 0.0 34.769758669347205 0.0 28 3.293042952805755E-4 0.0 0.0 35.32529501548554 0.0 29 3.293042952805755E-4 0.0 0.0 35.937307048264486 0.0 30 3.293042952805755E-4 0.0 0.0 36.62209533030044 0.0 31 3.293042952805755E-4 0.0 0.0 37.22093519126817 0.0 32 4.939564429208632E-4 0.0 0.0 37.786515318412555 0.0 33 4.939564429208632E-4 0.0 0.0 38.317024538109564 0.0 34 4.939564429208632E-4 0.0 0.0 38.853131930826336 0.0 35 4.939564429208632E-4 0.0 0.0 39.39615471374401 0.0 36 4.939564429208632E-4 0.0 0.0 39.91563223954912 0.0 37 6.58608590561151E-4 0.0 0.0 40.45618524025218 0.0 38 6.58608590561151E-4 0.0 0.0 40.98620050350627 0.0 39 6.58608590561151E-4 0.0 0.0 41.518850201122596 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGCGAT 70 0.0 45.000004 31 ACGCCCC 35 1.2106648E-7 45.000004 36 GCGCGAG 35 1.2106648E-7 45.000004 1 ATTGACG 35 1.2106648E-7 45.000004 1 ACGACGG 25 3.8886243E-5 45.000004 2 CTATGCG 20 7.030656E-4 45.0 1 TTAGGCG 20 7.030656E-4 45.0 1 GCGACAA 20 7.030656E-4 45.0 11 AAGCGAA 20 7.030656E-4 45.0 22 GCGCATT 20 7.030656E-4 45.0 11 TCGGACA 20 7.030656E-4 45.0 11 CTCGCGC 20 7.030656E-4 45.0 33 CTCGATG 20 7.030656E-4 45.0 1 TAAGCGA 20 7.030656E-4 45.0 21 AGGGCGC 40 6.8066583E-9 45.0 6 TCGCGCA 20 7.030656E-4 45.0 34 GTCGGAC 20 7.030656E-4 45.0 10 AGTCGAG 20 7.030656E-4 45.0 1 GTCGAAT 65 0.0 44.999996 43 CGCTCAC 30 2.1638043E-6 44.999996 34 >>END_MODULE