SRR2935897.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935897.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	407119
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGC	3363	0.8260484035380319	No Hit
GCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC	2970	0.7295164313136945	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCG	2652	0.6514065911932383	No Hit
GAATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTC	2568	0.6307738032368915	No Hit
CCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC	2009	0.4934675119559638	No Hit
CTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGCT	1314	0.32275575445999816	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1094	0.2687175002886134	No Hit
TCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC	792	0.19453771501698522	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCT	551	0.1353412638565137	No Hit
GAACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCT	548	0.13460437857235846	No Hit
ACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC	522	0.12821803944301297	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCATTCTCGT	512	0.1257617551624955	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTC	439	0.10783087991471782	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCC	437	0.10733962305861432	No Hit
CGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTG	430	0.10562022406225206	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTA	426	0.10463771035004507	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAGCGCA	35	1.2093369E-7	45.000004	18
ACACGAC	35	1.2093369E-7	45.000004	26
GTCGATG	30	2.1620344E-6	45.000004	1
ACGTTGG	30	2.1620344E-6	45.000004	1
TGGACGT	30	2.1620344E-6	45.000004	12
GCTTGCG	30	2.1620344E-6	45.000004	1
ACGATAG	60	0.0	45.000004	1
CGATGTA	30	2.1620344E-6	45.000004	10
CACGTGA	35	1.2093369E-7	45.000004	43
GTAAGCG	30	2.1620344E-6	45.000004	1
AGCCGCG	20	7.0279144E-4	45.0	14
TTGTGCG	45	3.8380676E-10	45.0	1
GGTCGGC	20	7.0279144E-4	45.0	22
GGGTCGT	45	3.8380676E-10	45.0	7
AGCCCGC	20	7.0279144E-4	45.0	23
TAGGTGA	20	7.0279144E-4	45.0	3
ATAGCGG	40	6.7957444E-9	45.0	2
ATCCGTG	20	7.0279144E-4	45.0	1
TGTTGCG	50	2.1827873E-11	45.0	1
CTAACCG	20	7.0279144E-4	45.0	41