##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935897.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 407119 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.761096878308308 31.0 31.0 34.0 30.0 34.0 2 31.82428970399318 33.0 31.0 34.0 30.0 34.0 3 31.84677207401276 33.0 31.0 34.0 30.0 34.0 4 35.582665019318675 37.0 35.0 37.0 33.0 37.0 5 33.46303169343607 37.0 35.0 37.0 31.0 37.0 6 34.46171266877743 37.0 35.0 37.0 30.0 37.0 7 35.60458244395373 37.0 35.0 37.0 32.0 37.0 8 35.61348156190205 37.0 35.0 37.0 33.0 37.0 9 37.507107258565675 39.0 37.0 39.0 35.0 39.0 10 36.9812020564012 39.0 37.0 39.0 33.0 39.0 11 37.04526440672138 39.0 37.0 39.0 33.0 39.0 12 36.95163330623233 39.0 35.0 39.0 33.0 39.0 13 36.81629695494438 39.0 35.0 39.0 33.0 39.0 14 37.8091196922767 40.0 37.0 41.0 33.0 41.0 15 37.93112333249001 40.0 37.0 41.0 33.0 41.0 16 37.98770629717601 40.0 36.0 41.0 33.0 41.0 17 37.97841663002709 40.0 36.0 41.0 33.0 41.0 18 37.95899724650532 40.0 36.0 41.0 33.0 41.0 19 37.878566217739774 40.0 36.0 41.0 33.0 41.0 20 37.89880354392696 40.0 36.0 41.0 34.0 41.0 21 37.798439768225016 39.0 36.0 41.0 33.0 41.0 22 37.88460130821701 39.0 36.0 41.0 33.0 41.0 23 37.87996138721111 40.0 36.0 41.0 34.0 41.0 24 37.816576971352355 39.0 36.0 41.0 33.0 41.0 25 37.649272080153466 39.0 35.0 41.0 33.0 41.0 26 37.71656198801824 39.0 36.0 41.0 33.0 41.0 27 37.679609647302144 39.0 36.0 41.0 33.0 41.0 28 37.6212286825228 39.0 36.0 41.0 33.0 41.0 29 37.658785269171915 40.0 36.0 41.0 33.0 41.0 30 37.498790279991844 39.0 36.0 41.0 33.0 41.0 31 37.47426673773516 39.0 36.0 41.0 33.0 41.0 32 37.433050287508074 40.0 35.0 41.0 33.0 41.0 33 37.364129406881034 40.0 35.0 41.0 33.0 41.0 34 37.298298531878885 40.0 35.0 41.0 33.0 41.0 35 37.2375276024946 40.0 35.0 41.0 32.0 41.0 36 37.14004996082227 39.0 35.0 41.0 32.0 41.0 37 37.05993579272891 39.0 35.0 41.0 32.0 41.0 38 36.989590267219164 39.0 35.0 41.0 32.0 41.0 39 36.99113527003161 39.0 35.0 41.0 32.0 41.0 40 36.902355330996585 39.0 35.0 41.0 31.0 41.0 41 36.786433450661846 39.0 35.0 41.0 31.0 41.0 42 36.82214045524773 39.0 35.0 41.0 31.0 41.0 43 36.742141732515556 39.0 35.0 41.0 31.0 41.0 44 36.60346974717466 39.0 35.0 41.0 31.0 41.0 45 36.57214475374522 39.0 35.0 41.0 31.0 41.0 46 36.48935077950182 39.0 35.0 41.0 31.0 41.0 47 36.41159710060204 39.0 35.0 40.0 31.0 41.0 48 36.36174926741322 39.0 35.0 40.0 31.0 41.0 49 36.29551556178906 39.0 35.0 40.0 30.0 41.0 50 36.14926593944277 39.0 35.0 40.0 30.0 41.0 51 34.8717549414299 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 8.0 10 6.0 11 6.0 12 5.0 13 3.0 14 9.0 15 10.0 16 24.0 17 28.0 18 77.0 19 179.0 20 315.0 21 495.0 22 791.0 23 1172.0 24 1712.0 25 2349.0 26 3143.0 27 3938.0 28 4302.0 29 5293.0 30 6509.0 31 8324.0 32 11052.0 33 15958.0 34 26791.0 35 36354.0 36 31422.0 37 47042.0 38 81653.0 39 118086.0 40 63.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.15293808444214 19.46777232209747 23.003593543902397 13.375696049557991 2 30.929777288704287 25.708699422036307 25.488125093645834 17.873398195613568 3 30.8543693612924 25.667433846123615 27.010038833854477 16.468157958729513 4 27.53077110132418 24.89026549976788 28.498301479420025 19.080661919487916 5 23.964491954440838 33.191278225776735 24.58937067540449 18.25485914437793 6 23.304488368265787 35.933719624974515 25.49966962976427 15.262122376995425 7 76.64049086385062 5.605240728140912 12.569052291836048 5.1852161161724215 8 76.40763511405756 6.425639677833754 10.311481409612423 6.8552437984962635 9 71.71367585398863 6.223978738403268 12.840226076405179 9.222119331202915 10 38.15370935770622 24.145028849058875 20.638683038620158 17.062578754614744 11 29.685914929050227 25.10690977330952 25.54216334781722 19.665011949823025 12 26.785534450615177 21.66393609730816 30.640427000459326 20.91010245161734 13 23.136969780334496 25.31029011173637 33.18955882678038 18.363181281148755 14 19.309587614432143 29.639491156148445 29.623770936753136 21.427150292666273 15 15.578246163898024 25.37292536088957 39.338620894627866 19.710207580584544 16 17.899680437415107 24.950198836212508 33.430520314699145 23.719600411673245 17 18.661865449659683 24.293879676458236 30.182575610570865 26.861679263311217 18 19.563567409037653 24.44199361857344 32.99330171276703 23.001137259621878 19 20.833957638921298 26.855538552609925 29.350632124759592 22.959871683709185 20 22.042449504935906 26.258907100872225 31.036625654906796 20.662017739285073 21 20.094861698913586 28.959591667301204 30.15457396977296 20.79097266401224 22 18.61666981889816 25.239057867601367 29.508079947140764 26.63619236635971 23 18.174293019976957 28.213126874451945 29.314770374264036 24.297809731307062 24 20.853116656309332 23.911681842409713 30.867878924835246 24.36732257644571 25 17.40301975589447 27.527823560187564 29.16542829000857 25.903728393909397 26 17.31164598065922 27.89577494540908 29.592821754818615 25.199757319113086 27 19.5770769725805 29.610752630066393 28.45728153193538 22.354888865417728 28 16.27435712899668 25.66252127756258 33.6980096728475 24.36511192059324 29 17.79799026820168 23.633876090283184 31.581920765181682 26.986212876333454 30 19.700382443462477 28.05985473534765 28.743438650615666 23.496324170574205 31 19.109891702426072 26.27364480655533 29.34056135920947 25.275902131809126 32 20.13661853168238 26.22476474937303 28.331765405200937 25.30685131374365 33 20.26827536911812 25.36604776490412 27.38265715920898 26.983019706768786 34 17.838518958830218 23.22588727128923 32.61970087370032 26.31589289618023 35 16.90758721651409 23.853959161817553 29.102547412427327 30.135906209241032 36 21.639373254502985 23.85494167552976 29.39681026923332 25.108874800733936 37 18.21604985274576 25.546584659522154 34.44152692456014 21.795838563171944 38 18.112149027679866 25.168808137178566 29.534853445798404 27.184189389343167 39 20.79318331986471 22.102382841380532 32.01447242698081 25.089961411773952 40 20.045981641731288 21.68506014212061 30.88384477265861 27.385113443489495 41 18.890054259319758 23.62773537958189 28.647889192103538 28.834321168994816 42 20.84844971617635 22.274813997872858 30.555685192781475 26.321051093169316 43 22.96748616497879 22.549917837290817 29.61787585447989 24.864720143250498 44 19.76670211903645 23.302277712413325 30.375885183447593 26.555134985102637 45 18.433431011571557 22.36225771825928 29.90673488586875 29.29757638430041 46 22.641782869382173 23.764059157150612 29.217992773611645 24.37616519985557 47 17.22886920040578 23.050754202088335 34.05859220522746 25.661784392278424 48 19.54981221706675 22.31779897278191 30.11576467814079 28.01662413201054 49 20.482708986807296 19.459666583971764 34.53044441551487 25.52718001370607 50 20.23192236176646 20.160444489203403 32.3148759944881 27.292757154542034 51 18.382585926964843 20.234133017618927 28.37401349482584 33.009267560590395 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 202.0 1 344.5 2 487.0 3 1269.0 4 2051.0 5 1431.0 6 811.0 7 799.0 8 787.0 9 846.5 10 906.0 11 919.5 12 933.0 13 918.0 14 903.0 15 865.5 16 828.0 17 801.0 18 774.0 19 836.0 20 898.0 21 995.0 22 1092.0 23 1070.5 24 1049.0 25 1291.0 26 1899.0 27 2265.0 28 3030.0 29 3795.0 30 4193.5 31 4592.0 32 5359.0 33 6126.0 34 7488.0 35 8850.0 36 9499.5 37 10149.0 38 11547.5 39 12946.0 40 15616.0 41 18286.0 42 21471.5 43 24657.0 44 28957.5 45 33258.0 46 43623.0 47 53988.0 48 54066.0 49 54144.0 50 52893.0 51 51642.0 52 43026.5 53 34411.0 54 28232.0 55 22053.0 56 18428.0 57 14803.0 58 12853.0 59 10903.0 60 10127.5 61 9352.0 62 8220.5 63 7089.0 64 5895.0 65 4701.0 66 3513.5 67 2326.0 68 1841.0 69 1356.0 70 1135.0 71 914.0 72 797.5 73 681.0 74 500.5 75 215.0 76 110.0 77 86.0 78 62.0 79 59.5 80 57.0 81 40.5 82 24.0 83 13.0 84 2.0 85 1.5 86 1.0 87 1.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 407119.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.29003164455012 #Duplication Level Percentage of deduplicated Percentage of total 1 69.8274704665229 23.245587014894358 2 12.882019269360049 8.576856582454008 3 5.237931860784018 5.231127521924917 4 2.661878723232543 3.5445610772146403 5 1.576607345577716 2.624265421265617 6 0.92372245201273 1.8450449794971124 7 0.7045596936445465 1.6418370147831045 8 0.4737055301181642 1.2615737670265659 9 0.3790592738289738 1.1357005698834053 >10 5.09291850648481 39.65584087659977 >50 0.18175757567585105 3.6820817164597703 >100 0.049503079553991955 2.9080328746629167 >500 0.003694259668208355 0.7194448243583719 >1k 0.005171963535491697 3.9280457589754527 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGC 3363 0.8260484035380319 No Hit GCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 2970 0.7295164313136945 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCG 2652 0.6514065911932383 No Hit GAATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTC 2568 0.6307738032368915 No Hit CCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 2009 0.4934675119559638 No Hit CTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGCT 1314 0.32275575445999816 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1094 0.2687175002886134 No Hit TCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 792 0.19453771501698522 No Hit GAATGACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCT 551 0.1353412638565137 No Hit GAACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCT 548 0.13460437857235846 No Hit ACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTGC 522 0.12821803944301297 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCATTCTCGT 512 0.1257617551624955 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTC 439 0.10783087991471782 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCC 437 0.10733962305861432 No Hit CGCTGTCTCTTATACACATCTGACGCCATTCTCGTCGTATGCCGTCTTCTG 430 0.10562022406225206 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCATTCTCGTCGTA 426 0.10463771035004507 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.45628428051749E-4 0.0 0.0 0.3438797992724486 0.0 2 2.45628428051749E-4 0.0 0.0 1.9972047484887712 0.0 3 2.45628428051749E-4 0.0 0.0 2.641242486840457 0.0 4 2.45628428051749E-4 0.0 0.0 3.5431900746464793 0.0 5 2.45628428051749E-4 0.0 0.0 6.200152780882248 0.0 6 2.45628428051749E-4 0.0 0.0 7.586725257234371 0.0 7 2.45628428051749E-4 0.0 0.0 9.034950469027484 0.0 8 2.45628428051749E-4 0.0 0.0 11.395439662604792 0.0 9 2.45628428051749E-4 0.0 0.0 12.224435607279444 0.0 10 2.45628428051749E-4 0.0 0.0 14.741390109525716 0.0 11 2.45628428051749E-4 0.0 0.0 17.107528756948213 0.0 12 2.45628428051749E-4 0.0 0.0 19.788071792276952 0.0 13 2.45628428051749E-4 0.0 0.0 20.5814516148841 0.0 14 2.45628428051749E-4 0.0 0.0 20.888732778376838 0.0 15 2.45628428051749E-4 0.0 0.0 21.523191008034505 0.0 16 2.45628428051749E-4 0.0 0.0 22.718173310506266 0.0 17 2.45628428051749E-4 0.0 0.0 24.132501799228237 0.0 18 2.45628428051749E-4 0.0 0.0 25.78312483573599 0.0 19 4.91256856103498E-4 0.0 0.0 26.79290330345673 0.0 20 4.91256856103498E-4 0.0 0.0 27.63565444010228 0.0 21 4.91256856103498E-4 0.0 0.0 28.705366244267648 0.0 22 7.36885284155247E-4 0.0 0.0 29.748058921347322 0.0 23 7.36885284155247E-4 0.0 0.0 30.818016353940738 0.0 24 7.36885284155247E-4 0.0 0.0 31.58928961802323 0.0 25 7.36885284155247E-4 0.0 0.0 32.28564621154994 0.0 26 7.36885284155247E-4 0.0 0.0 32.95301865056654 0.0 27 7.36885284155247E-4 0.0 0.0 33.59091567821694 0.0 28 7.36885284155247E-4 0.0 0.0 34.22512827944655 0.0 29 7.36885284155247E-4 0.0 0.0 34.86965727465434 0.0 30 7.36885284155247E-4 0.0 0.0 35.58173408757636 0.0 31 7.36885284155247E-4 0.0 0.0 36.34760352624171 0.0 32 7.36885284155247E-4 0.0 0.0 36.97395601777367 0.0 33 7.36885284155247E-4 0.0 0.0 37.61087053171186 0.0 34 7.36885284155247E-4 0.0 0.0 38.23599488110356 0.0 35 7.36885284155247E-4 0.0 0.0 38.8802782478833 0.0 36 7.36885284155247E-4 0.0 0.0 39.50147254242617 0.0 37 7.36885284155247E-4 0.0 0.0 40.10620973228958 0.0 38 7.36885284155247E-4 0.0 0.0 40.67901522650625 0.0 39 7.36885284155247E-4 0.0 0.0 41.3171578825847 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGCGCA 35 1.2093369E-7 45.000004 18 ACACGAC 35 1.2093369E-7 45.000004 26 GTCGATG 30 2.1620344E-6 45.000004 1 ACGTTGG 30 2.1620344E-6 45.000004 1 TGGACGT 30 2.1620344E-6 45.000004 12 GCTTGCG 30 2.1620344E-6 45.000004 1 ACGATAG 60 0.0 45.000004 1 CGATGTA 30 2.1620344E-6 45.000004 10 CACGTGA 35 1.2093369E-7 45.000004 43 GTAAGCG 30 2.1620344E-6 45.000004 1 AGCCGCG 20 7.0279144E-4 45.0 14 TTGTGCG 45 3.8380676E-10 45.0 1 GGTCGGC 20 7.0279144E-4 45.0 22 GGGTCGT 45 3.8380676E-10 45.0 7 AGCCCGC 20 7.0279144E-4 45.0 23 TAGGTGA 20 7.0279144E-4 45.0 3 ATAGCGG 40 6.7957444E-9 45.0 2 ATCCGTG 20 7.0279144E-4 45.0 1 TGTTGCG 50 2.1827873E-11 45.0 1 CTAACCG 20 7.0279144E-4 45.0 41 >>END_MODULE