##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935896.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1088801 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.889285553558455 33.0 31.0 34.0 30.0 34.0 2 31.938266037595483 33.0 31.0 34.0 30.0 34.0 3 31.944445311861397 33.0 31.0 34.0 30.0 34.0 4 35.667489284084056 37.0 35.0 37.0 33.0 37.0 5 33.58490027103208 37.0 35.0 37.0 32.0 37.0 6 34.56822688443526 37.0 35.0 37.0 30.0 37.0 7 35.67799074394678 37.0 35.0 37.0 32.0 37.0 8 35.69021060781539 37.0 35.0 37.0 35.0 37.0 9 37.56697504870036 39.0 37.0 39.0 35.0 39.0 10 37.07838163263994 39.0 37.0 39.0 33.0 39.0 11 37.118562528873504 39.0 37.0 39.0 34.0 39.0 12 37.09778738263466 39.0 37.0 39.0 34.0 39.0 13 37.051478644857966 39.0 37.0 39.0 33.0 39.0 14 38.06533792676532 40.0 37.0 41.0 33.0 41.0 15 38.17675406249627 40.0 37.0 41.0 33.0 41.0 16 38.216571255904434 40.0 37.0 41.0 33.0 41.0 17 38.21538462951448 40.0 37.0 41.0 34.0 41.0 18 38.17202317044161 40.0 37.0 41.0 34.0 41.0 19 38.052512809962515 40.0 37.0 41.0 34.0 41.0 20 38.03559787325691 40.0 36.0 41.0 34.0 41.0 21 37.93370413877283 40.0 36.0 41.0 33.0 41.0 22 38.03646028980502 40.0 36.0 41.0 34.0 41.0 23 38.0375229265954 40.0 36.0 41.0 34.0 41.0 24 37.98456099875 40.0 36.0 41.0 34.0 41.0 25 37.78987069262427 40.0 36.0 41.0 33.0 41.0 26 37.846422808208295 40.0 36.0 41.0 33.0 41.0 27 37.82329461490208 40.0 36.0 41.0 33.0 41.0 28 37.718583101962615 40.0 36.0 41.0 33.0 41.0 29 37.673465582783265 40.0 36.0 41.0 33.0 41.0 30 37.48435113487221 40.0 36.0 41.0 33.0 41.0 31 37.40159955767859 40.0 35.0 41.0 33.0 41.0 32 37.25010355427668 40.0 35.0 41.0 32.0 41.0 33 37.12709668708975 39.0 35.0 41.0 32.0 41.0 34 37.004307490533165 39.0 35.0 41.0 31.0 41.0 35 36.85260116403273 39.0 35.0 41.0 31.0 41.0 36 36.78141735725812 39.0 35.0 41.0 31.0 41.0 37 36.6783875106654 39.0 35.0 41.0 31.0 41.0 38 36.5894759464769 39.0 35.0 41.0 30.0 41.0 39 36.52034210108183 39.0 35.0 41.0 30.0 41.0 40 36.48301204719687 39.0 35.0 41.0 30.0 41.0 41 36.38938061225146 39.0 35.0 41.0 30.0 41.0 42 36.41916015874342 39.0 35.0 41.0 30.0 41.0 43 36.36802133723242 39.0 35.0 41.0 30.0 41.0 44 36.2256114753752 39.0 35.0 41.0 30.0 41.0 45 36.163734236100076 39.0 35.0 41.0 30.0 41.0 46 36.06030945967169 39.0 35.0 40.0 29.0 41.0 47 35.992368669756914 38.0 35.0 40.0 29.0 41.0 48 35.894426070512424 38.0 35.0 40.0 29.0 41.0 49 35.828227564081956 38.0 35.0 40.0 29.0 41.0 50 35.713327779823864 38.0 35.0 40.0 28.0 41.0 51 34.46964137615598 37.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 4.0 9 21.0 10 19.0 11 13.0 12 5.0 13 26.0 14 27.0 15 33.0 16 77.0 17 143.0 18 240.0 19 507.0 20 987.0 21 1547.0 22 2462.0 23 3577.0 24 5484.0 25 7893.0 26 10696.0 27 12216.0 28 13259.0 29 14876.0 30 17613.0 31 22397.0 32 29348.0 33 41440.0 34 68040.0 35 82146.0 36 88323.0 37 134022.0 38 222020.0 39 309187.0 40 149.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.71652854837569 19.191569441982512 23.03983923600364 14.052062773638157 2 32.99298953619624 25.076666902399978 24.514305185245053 17.41603837615873 3 31.02008539668865 25.128558845923177 27.490147419041676 16.361208338346493 4 27.360187949864116 24.722791400816128 29.31894809060609 18.598072558713667 5 24.02018366992683 32.789922125347054 24.890498814751272 18.299395389974844 6 24.17585950049642 34.792767457046786 26.061970920305917 14.96940212215088 7 77.48844830230685 5.273139903435063 12.27542957804043 4.9629822162176565 8 77.92838177040616 5.910538289366009 10.772216410528646 5.388863529699183 9 72.49387169923614 6.301335138376986 12.81629976460345 8.388493397783433 10 39.05194796845337 23.373417180917357 20.941384146414265 16.633250704215 11 28.79874283730452 24.165572955939606 26.58979923787726 20.445884968878612 12 25.480597464550453 21.499337344473414 31.432465620439366 21.587599570536764 13 23.845404256608877 22.473252688048596 34.85255799728325 18.828785058059278 14 20.61735799287473 26.139946601812454 32.75336815451125 20.48932725080157 15 18.73501218312621 24.58823972424713 36.577758470096924 20.098989622529736 16 21.931831436598607 24.841729572254252 31.08906035170798 22.137378639439163 17 22.315556286226776 24.282306867829842 29.98885930486838 23.413277541074997 18 23.36652886983021 23.833740049834635 31.474346551849237 21.325384528485923 19 22.865427199277004 26.269079473659556 28.820601744487746 22.044891582575694 20 22.704516252281177 25.981515446808 30.575467877050077 20.738500423860742 21 22.179535103292523 27.153263084806127 30.930812884999188 19.736388926902162 22 21.2509907687447 23.492630884798967 30.776422872499197 24.479955473957133 23 19.92788397512493 26.152529250064983 30.665842518513486 23.253744256296606 24 20.842927219941938 24.345587485683794 30.93283345625142 23.878651838122853 25 21.411993559888355 27.477289238345666 28.24859639181081 22.862120809955172 26 20.764308629400595 25.403540224522203 29.836581707768456 23.995569438308745 27 21.668330576478162 25.76549801111498 29.29598705364892 23.270184358757938 28 20.39132954506838 25.30039924651061 30.430078591037297 23.87819261738371 29 22.70433256398552 24.38351911873703 29.59778692341392 23.314361393863525 30 22.8779180033817 26.03496874084429 29.36294143741602 21.72417181835799 31 24.20414749802765 25.1904618015597 27.332818393811177 23.272572306601482 32 24.59512803533428 26.008793158713118 27.783956847945586 21.61212195800702 33 22.253653330590254 25.253742419413648 28.659047888457117 23.833556361538978 34 22.73767198964733 23.65822588333405 29.551497472908274 24.052604654110347 35 21.09458018499248 26.747403795551257 28.731053700354792 23.42696231910147 36 23.886274902392632 26.111658604281224 27.220401156868885 22.78166533645726 37 21.46599791881161 26.685317151619074 28.855043299923494 22.993641629645822 38 21.566934637275313 26.56242968182432 28.509709304087703 23.36092637681266 39 21.287361051284854 23.798563741216256 29.731052781913313 25.183022425585577 40 21.86698946823157 24.16603217667875 30.249696684701792 23.717281670387884 41 20.19726286070641 25.669061655894883 27.280834606140147 26.85284087725856 42 21.397665872827083 25.59246363660577 28.84356278144491 24.166307709122236 43 21.585027934397562 24.422001816677245 29.31132502633631 24.681645222588884 44 22.19955712751917 23.96709775248186 29.299568975414243 24.53377614458473 45 21.73804028468012 22.63416363504442 29.289649807448743 26.338146272826712 46 22.951209633348977 24.676134573719164 28.46617517801692 23.906480614914937 47 20.1731996939753 24.257233415472616 31.319405474462275 24.250161416089806 48 20.508798210141247 24.84393383180214 29.7268279511132 24.920440006943416 49 21.49584726685593 22.744835833177966 31.33217181101046 24.427145088955648 50 20.834202025898215 22.592374547782377 30.98858285398342 25.58484057233599 51 20.05536365231112 22.815831359449522 28.885535557002612 28.243269431236744 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 365.0 1 820.5 2 1276.0 3 6247.0 4 11218.0 5 7416.0 6 3614.0 7 3552.0 8 3490.0 9 3513.0 10 3536.0 11 3505.0 12 3474.0 13 3398.0 14 3322.0 15 3169.5 16 3017.0 17 2954.0 18 2891.0 19 3078.0 20 3265.0 21 3438.5 22 3612.0 23 3888.5 24 4165.0 25 5023.0 26 6685.5 27 7490.0 28 8528.5 29 9567.0 30 11103.0 31 12639.0 32 15633.0 33 18627.0 34 21830.5 35 25034.0 36 27810.0 37 30586.0 38 33876.5 39 37167.0 40 41039.0 41 44911.0 42 51079.5 43 57248.0 44 64074.0 45 70900.0 46 93602.0 47 116304.0 48 116817.5 49 117331.0 50 115697.5 51 114064.0 52 100037.5 53 86011.0 54 75616.0 55 65221.0 56 58885.0 57 52549.0 58 48576.0 59 44603.0 60 40110.5 61 35618.0 62 31354.5 63 27091.0 64 24037.0 65 20983.0 66 17458.0 67 13933.0 68 12066.5 69 10200.0 70 8471.5 71 6743.0 72 5755.5 73 4768.0 74 3876.5 75 2388.0 76 1791.0 77 1283.5 78 776.0 79 567.0 80 358.0 81 211.5 82 65.0 83 58.5 84 52.0 85 45.5 86 39.0 87 23.5 88 8.0 89 8.5 90 9.0 91 6.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1088801.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.07308855065386 #Duplication Level Percentage of deduplicated Percentage of total 1 74.30196474230117 25.316974241519887 2 10.793195534121715 7.355150143573019 3 3.9860896491975115 4.074551567638548 4 2.0276275155000056 2.7635012753349586 5 1.1429208721836317 1.9471422042151711 6 0.7553008885177354 1.5441260434111401 7 0.5544831197954018 1.3225066708442075 8 0.4229871989112741 1.1529984227437502 9 0.3663075787515209 1.1233107510818565 >10 5.4452420636284735 43.745103458608696 >50 0.16218480978613736 3.361801695296427 >100 0.03519794512965202 2.0755317052649747 >500 0.0032490410878983603 0.832131566273263 >1k 0.0024367808159237703 1.6975668460082387 >5k 8.122602719745901E-4 1.6876034081858984 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6780 0.6227033222783595 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTC 6019 0.5528099257807441 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGC 5494 0.5045917481706942 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCG 4681 0.4299224559859882 No Hit GCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 3268 0.3001466751040824 TruSeq Adapter, Index 19 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTG 2097 0.19259717799671383 No Hit CCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGC 1994 0.18313723077036118 TruSeq Adapter, Index 19 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCTGCT 1541 0.1415318318039752 TruSeq Adapter, Index 13 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTTCT 1462 0.13427614412551053 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTT 1227 0.11269276938577388 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.673765913146663E-4 0.0 0.0 0.15255312954341518 0.0 2 3.673765913146663E-4 0.0 0.0 0.7849919314916133 0.0 3 3.673765913146663E-4 0.0 0.0 1.2170268028776607 0.0 4 3.673765913146663E-4 0.0 0.0 1.811442127624791 0.0 5 3.673765913146663E-4 0.0 0.0 3.5394897690211526 0.0 6 3.673765913146663E-4 0.0 0.0 4.869760406171559 0.0 7 3.673765913146663E-4 0.0 0.0 5.99586150269884 0.0 8 3.673765913146663E-4 0.0 0.0 7.64345367059729 0.0 9 3.673765913146663E-4 0.0 0.0 8.323375896972909 0.0 10 3.673765913146663E-4 0.0 0.0 10.048392681490924 0.0 11 3.673765913146663E-4 0.0 0.0 11.620580804022039 0.0 12 3.673765913146663E-4 0.0 0.0 13.406031037811317 0.0 13 3.673765913146663E-4 0.0 0.0 14.01817228308938 0.0 14 3.673765913146663E-4 0.0 0.0 14.305919998236593 0.0 15 3.673765913146663E-4 0.0 0.0 14.752098868388254 0.0 16 3.673765913146663E-4 0.0 0.0 15.547009967845364 0.0 17 3.673765913146663E-4 0.0 0.0 16.49778058616772 0.0 18 3.673765913146663E-4 0.0 0.0 17.471879618038557 0.0 19 3.673765913146663E-4 0.0 0.0 18.15970044112744 0.0 20 3.673765913146663E-4 0.0 0.0 18.780291348005743 0.0 21 3.673765913146663E-4 0.0 0.0 19.50163528505209 0.0 22 3.673765913146663E-4 0.0 0.0 20.268533919421454 0.0 23 3.673765913146663E-4 0.0 0.0 21.05343400676524 0.0 24 3.673765913146663E-4 0.0 0.0 21.675769952452285 0.0 25 3.673765913146663E-4 0.0 0.0 22.22839618993737 0.0 26 3.673765913146663E-4 0.0 0.0 22.75209152085643 0.0 27 3.673765913146663E-4 0.0 0.0 23.311697913576495 0.0 28 3.673765913146663E-4 0.0 0.0 23.886642278983945 0.0 29 3.673765913146663E-4 0.0 0.0 24.465995163487175 0.0 30 3.673765913146663E-4 0.0 0.0 25.181644763368144 0.0 31 3.673765913146663E-4 0.0 0.0 25.769447309471612 0.0 32 3.673765913146663E-4 0.0 0.0 26.340258688226776 0.0 33 3.673765913146663E-4 0.0 0.0 26.90445728833827 0.0 34 3.673765913146663E-4 0.0 0.0 27.469666174075886 0.0 35 3.673765913146663E-4 0.0 0.0 28.055815525518437 0.0 36 3.673765913146663E-4 0.0 0.0 28.566928208184965 0.0 37 4.592207391433329E-4 0.0 0.0 29.101461148547806 0.0 38 4.592207391433329E-4 0.0 0.0 29.67971190327709 0.0 39 4.592207391433329E-4 0.0 0.0 30.424292409724092 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATGCG 20 7.0331234E-4 45.0 1 ATTAACG 30 2.165396E-6 44.999996 1 CGTTTTT 3260 0.0 43.136505 1 TACGGGT 140 0.0 41.785717 4 CGTTAGG 155 0.0 40.645164 2 TCGTTAG 50 1.0822987E-9 40.500004 1 CGTAAGG 145 0.0 40.34483 2 GTTTACG 45 1.9281288E-8 40.0 1 TTAGCCG 65 9.094947E-12 38.07692 1 ATAACGG 65 9.094947E-12 38.07692 2 CGTTATT 280 0.0 37.76786 1 TAGCACG 60 1.5643309E-10 37.499996 1 CGCAATA 30 1.1398825E-4 37.499996 15 CGACTAA 30 1.1398825E-4 37.499996 35 GCGTTAG 85 0.0 37.058823 1 ACGGGTC 170 0.0 37.058823 5 GTACGAG 55 2.748493E-9 36.81818 1 TACGCGG 80 0.0 36.5625 2 GCGTAAG 80 0.0 36.5625 1 ACGGGCG 235 0.0 36.38298 5 >>END_MODULE