##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935895.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 350885 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.77691836356641 31.0 31.0 34.0 30.0 34.0 2 31.820978383230972 33.0 31.0 34.0 30.0 34.0 3 31.86484745714408 33.0 31.0 34.0 30.0 34.0 4 35.6086353078644 37.0 35.0 37.0 33.0 37.0 5 33.59551134987247 37.0 35.0 37.0 32.0 37.0 6 34.53338843210739 37.0 35.0 37.0 30.0 37.0 7 35.57623152884848 37.0 35.0 37.0 32.0 37.0 8 35.50240962138592 37.0 35.0 37.0 33.0 37.0 9 37.370303660743545 39.0 37.0 39.0 34.0 39.0 10 37.03899568234607 39.0 37.0 39.0 33.0 39.0 11 37.05955227496188 39.0 37.0 39.0 33.0 39.0 12 36.95228351169187 39.0 35.0 39.0 33.0 39.0 13 36.75830827764082 39.0 35.0 39.0 33.0 39.0 14 37.796665574190975 40.0 36.0 41.0 33.0 41.0 15 37.86868917166593 40.0 36.0 41.0 33.0 41.0 16 37.96127506162988 40.0 36.0 41.0 33.0 41.0 17 37.89287088362284 40.0 36.0 41.0 33.0 41.0 18 37.881892927882355 39.0 36.0 41.0 33.0 41.0 19 37.839688216937176 39.0 36.0 41.0 33.0 41.0 20 37.783439018481836 40.0 36.0 41.0 33.0 41.0 21 37.77105034412984 39.0 36.0 41.0 33.0 41.0 22 37.845108796329285 39.0 36.0 41.0 33.0 41.0 23 37.81347735012896 39.0 36.0 41.0 34.0 41.0 24 37.76291662510509 39.0 36.0 41.0 33.0 41.0 25 37.621616769026886 39.0 35.0 41.0 33.0 41.0 26 37.635290764780486 39.0 35.0 41.0 33.0 41.0 27 37.648602818587285 39.0 36.0 41.0 33.0 41.0 28 37.51840631545948 39.0 35.0 41.0 33.0 41.0 29 37.50293400971828 39.0 36.0 41.0 33.0 41.0 30 37.438821836214146 39.0 36.0 41.0 33.0 41.0 31 37.405491827806834 39.0 35.0 41.0 33.0 41.0 32 37.26528919731536 39.0 35.0 41.0 33.0 41.0 33 37.21521866138478 39.0 35.0 41.0 33.0 41.0 34 37.12705302307024 39.0 35.0 41.0 32.0 41.0 35 37.114946492440545 39.0 35.0 41.0 32.0 41.0 36 37.0377018111347 39.0 35.0 41.0 32.0 41.0 37 36.95469170810949 39.0 35.0 41.0 32.0 41.0 38 36.83444718355017 39.0 35.0 41.0 31.0 41.0 39 36.81545235618508 39.0 35.0 41.0 31.0 41.0 40 36.71019279821024 39.0 35.0 41.0 31.0 41.0 41 36.66440286703621 39.0 35.0 41.0 31.0 41.0 42 36.69457229576642 39.0 35.0 41.0 31.0 41.0 43 36.60024509454664 39.0 35.0 41.0 31.0 41.0 44 36.47664904455876 39.0 35.0 41.0 31.0 41.0 45 36.447497043190786 39.0 35.0 40.0 31.0 41.0 46 36.36264018125597 39.0 35.0 40.0 31.0 41.0 47 36.265175199851804 39.0 35.0 40.0 30.0 41.0 48 36.1957592943557 38.0 35.0 40.0 30.0 41.0 49 36.155144848027135 38.0 35.0 40.0 30.0 41.0 50 36.004101058751445 38.0 35.0 40.0 30.0 41.0 51 34.71550508001197 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 5.0 11 8.0 12 8.0 13 5.0 14 8.0 15 8.0 16 17.0 17 43.0 18 83.0 19 169.0 20 336.0 21 614.0 22 906.0 23 1242.0 24 1586.0 25 2153.0 26 2700.0 27 3312.0 28 3628.0 29 4383.0 30 5423.0 31 7232.0 32 9689.0 33 14166.0 34 24531.0 35 32176.0 36 27694.0 37 40806.0 38 69119.0 39 98788.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.21542670675577 18.680764352993144 22.336948002906933 12.766860937344143 2 29.32955241745871 30.586374453168418 22.64616612280377 17.4379070065691 3 28.81855878706699 30.209042848796614 25.642874446043574 15.329523918092821 4 28.041381079270987 24.007865824985394 29.805206834147942 18.14554626159568 5 26.165267822790945 31.96830870513131 21.99011072003648 19.876312752041265 6 23.314476252903376 37.89019194322926 24.35213816492583 14.443193638941535 7 73.27756957407698 5.841800019949557 15.568918591561337 5.31171181441213 8 71.23843994471123 10.507146215996695 11.089673254770082 7.1647405845219945 9 65.46703335850778 7.483648488821124 13.528933981218918 13.520384171452186 10 38.81442637901307 25.787936218419137 20.021944511734613 15.375692890833179 11 31.955198996822322 23.754506462231216 25.508927426364764 18.781367114581702 12 28.67378200835031 19.630363224418257 30.01866708465737 21.67718768257406 13 23.13350527950753 25.807885774541518 33.024210211322796 18.034398734628155 14 18.280633255910057 31.424825797626006 27.310942331533123 22.983598614930816 15 16.362340937914134 24.520569417330464 39.96665574190974 19.150433902845663 16 18.02499394388475 24.641691722359177 32.52091140972113 24.81240292403494 17 18.163215868446926 24.347863260042462 30.632828419567666 26.856092451942942 18 19.73068099234792 25.226213716744798 31.72492412043832 23.318181170468957 19 21.18956353221141 26.975504795018313 28.09752483007253 23.73740684269775 20 23.347535517334737 25.17320489619106 32.23591775083005 19.243341835644156 21 21.436938028128875 29.594596520227423 29.185060632400926 19.783404819242772 22 18.756287672599285 25.02044829502544 29.079897972270118 27.143366060105162 23 18.69529902959659 29.09671259814469 29.08217792154125 23.12581045071747 24 22.295623922367728 23.257762514784048 29.364891631161207 25.081721931687017 25 17.879362184191404 30.14064437066275 27.62614531826667 24.35384812687918 26 17.632272681932825 27.837325619504966 29.723413654046198 24.80698804451601 27 22.34863274292147 27.653219715861322 26.267010559015063 23.73113698220215 28 17.966285250153184 26.85238753437736 31.853741254257095 23.327585961212364 29 20.00512988586004 27.53950724596378 27.856135200991776 24.599227667184405 30 20.01538965758012 26.233951294583697 29.107542357182552 24.64311669065363 31 24.315088989269988 26.952420308648133 23.004403152029866 25.72808755005201 32 22.793792838109354 30.912977186257606 25.100816506832725 21.192413468800318 33 22.705444803853116 24.905310856833434 26.28525015318409 26.10399418612936 34 21.348305000213745 26.010516266013084 27.513287829345796 25.127890904427375 35 18.116476908388787 25.266112828989556 28.50022087008564 28.11718939253602 36 24.95660971543383 26.57252376134631 26.502700314917995 21.968166208301867 37 20.336007523832595 26.568248856462944 29.153141342605128 23.942602277099333 38 22.34663778730923 25.70072815879847 28.05449078757998 23.898143266312324 39 23.10187098337062 25.706143038317396 28.271085968337207 22.92090000997478 40 21.01742736224119 22.15483705487553 33.930775040255355 22.896960542627927 41 19.903957136953704 24.34643829174801 26.851532553400688 28.898072017897604 42 22.782393091753708 22.781538110777035 30.857688416432733 23.57838038103652 43 26.306054690283144 23.507986947290423 26.02106103139205 24.164897331034386 44 21.53298089117517 23.60915969619676 28.764124998218787 26.09373441440928 45 19.563959701896632 23.769896119811335 27.489633355657837 29.176510822634192 46 24.360117987374778 25.19999430012682 27.62386536899554 22.816022343502855 47 18.775382247744986 22.909500263619133 34.04819242771848 24.266925060917394 48 21.343745101671487 22.31015859897117 29.41020562292489 26.93589067643245 49 21.101785485272952 20.334297561879247 34.574290722031435 23.989626230816363 50 21.66835287914844 20.70649928039101 30.995340353677133 26.62980748678342 51 19.739515795773542 21.523576100431765 27.039058380951026 31.697849722843667 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 177.0 1 369.0 2 561.0 3 1262.0 4 1963.0 5 1351.5 6 740.0 7 731.0 8 722.0 9 790.0 10 858.0 11 866.5 12 875.0 13 863.5 14 852.0 15 863.5 16 875.0 17 851.0 18 827.0 19 710.0 20 593.0 21 802.0 22 1011.0 23 1108.5 24 1206.0 25 1463.5 26 2048.5 27 2376.0 28 2884.5 29 3393.0 30 3503.5 31 3614.0 32 4480.0 33 5346.0 34 6467.0 35 7588.0 36 7839.0 37 8090.0 38 9266.0 39 10442.0 40 12635.5 41 14829.0 42 17099.5 43 19370.0 44 23057.0 45 26744.0 46 39787.5 47 52831.0 48 47304.5 49 41778.0 50 41331.0 51 40884.0 52 33186.0 53 25488.0 54 21740.5 55 17993.0 56 16074.5 57 14156.0 58 12483.5 59 10811.0 60 10453.0 61 10095.0 62 8811.5 63 7528.0 64 6138.0 65 4748.0 66 4186.5 67 3625.0 68 3057.5 69 2490.0 70 2010.5 71 1531.0 72 1272.0 73 1013.0 74 780.0 75 415.5 76 284.0 77 200.5 78 117.0 79 95.0 80 73.0 81 87.5 82 102.0 83 59.5 84 17.0 85 9.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 350885.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.033976877013345 #Duplication Level Percentage of deduplicated Percentage of total 1 67.28940866099965 20.209685437923657 2 13.851355943786272 8.320226082619167 3 5.314598921174686 4.788556233274818 4 2.636893803796507 3.1678563012145617 5 1.4899712750442733 2.23748814110469 6 0.9971364106751873 1.7968783140867992 7 0.7105138185684274 1.4937688918377823 8 0.596072202964746 1.432193500869887 9 0.4955654026085841 1.3395419858694624 >10 6.409510241558645 41.29775404109268 >50 0.14528621213407203 2.8500378635912447 >100 0.050750663142723786 2.7869759939165646 >500 0.005970666252085153 1.5170713292354403 >1k 0.005970666252085153 4.953793790795395 >5k 9.95111042014192E-4 1.8081720925678515 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGC 6050 1.7242116362910926 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCG 4882 1.3913390427062997 No Hit GAATCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTC 4852 1.3827892329395672 No Hit GCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 2908 0.8287615600552887 No Hit CCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 1799 0.5127035923450703 No Hit GAATGACTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCT 1127 0.32118785357025803 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1007 0.2869886145033273 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACGATCTGT 940 0.2678940393576243 No Hit CTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGCT 935 0.26646907106316886 TruSeq Adapter, Index 13 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCT 915 0.2607691978853471 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTC 841 0.23967966712740643 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACGATCTGTCGTA 830 0.23654473687960442 No Hit TCTGTCTCTTATACACATCTGACGCACGATCTGTCGTATGCCGTCTTCTGC 615 0.17527110021802014 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 387 0.11029254599085171 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 369 0.10516266013081209 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.699873177821794E-4 0.0 0.0 0.28527865254998075 0.0 2 5.699873177821794E-4 0.0 0.0 1.9909657010131525 0.0 3 5.699873177821794E-4 0.0 0.0 2.523048862162817 0.0 4 5.699873177821794E-4 0.0 0.0 3.4153640081508185 0.0 5 5.699873177821794E-4 0.0 0.0 6.597033216010944 0.0 6 5.699873177821794E-4 0.0 0.0 7.804551348732491 0.0 7 5.699873177821794E-4 0.0 0.0 9.248899211992534 0.0 8 5.699873177821794E-4 0.0 0.0 11.318238169200736 0.0 9 5.699873177821794E-4 0.0 0.0 12.019037576413925 0.0 10 5.699873177821794E-4 0.0 0.0 14.912293201476267 0.0 11 5.699873177821794E-4 0.0 0.0 16.852530031206804 0.0 12 5.699873177821794E-4 0.0 0.0 20.228849908089543 0.0 13 5.699873177821794E-4 0.0 0.0 21.005172634908874 0.0 14 5.699873177821794E-4 0.0 0.0 21.338615215811448 0.0 15 5.699873177821794E-4 0.0 0.0 22.107528107499608 0.0 16 5.699873177821794E-4 0.0 0.0 23.220428345469312 0.0 17 8.54980976673269E-4 0.0 0.0 24.376647619590464 0.0 18 8.54980976673269E-4 0.0 0.0 25.75060204910441 0.0 19 8.54980976673269E-4 0.0 0.0 26.75320974108326 0.0 20 8.54980976673269E-4 0.0 0.0 27.509012924462432 0.0 21 8.54980976673269E-4 0.0 0.0 28.390783305071462 0.0 22 8.54980976673269E-4 0.0 0.0 29.301338045228494 0.0 23 8.54980976673269E-4 0.0 0.0 30.158598971172893 0.0 24 8.54980976673269E-4 0.0 0.0 30.833178961768102 0.0 25 0.0011399746355643587 0.0 0.0 31.4632999415763 0.0 26 0.0011399746355643587 0.0 0.0 32.0327172720407 0.0 27 0.0011399746355643587 0.0 0.0 32.64231870840874 0.0 28 0.0011399746355643587 0.0 0.0 33.17810678712399 0.0 29 0.0011399746355643587 0.0 0.0 33.733844421961614 0.0 30 0.0011399746355643587 0.0 0.0 34.41298431109908 0.0 31 0.0011399746355643587 0.0 0.0 35.02771563332716 0.0 32 0.0011399746355643587 0.0 0.0 35.58744317938926 0.0 33 0.0011399746355643587 0.0 0.0 36.1523006113114 0.0 34 0.0011399746355643587 0.0 0.0 36.640494748991834 0.0 35 0.0011399746355643587 0.0 0.0 37.208202117502886 0.0 36 0.0011399746355643587 0.0 0.0 37.778759422602846 0.0 37 0.0011399746355643587 0.0 0.0 38.31882240620146 0.0 38 0.0011399746355643587 0.0 0.0 38.855750459552276 0.0 39 0.0011399746355643587 0.0 0.0 39.38555367143081 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGT 30 2.1611759E-6 45.000004 4 GCCCTCG 70 0.0 45.000004 13 AGTTATG 30 2.1611759E-6 45.000004 1 GCTACGA 60 0.0 45.000004 10 TGATATG 25 3.8852482E-5 45.0 1 CCTTATC 20 7.02658E-4 45.0 43 CGGCGAA 20 7.02658E-4 45.0 31 TCGTTGA 25 3.8852482E-5 45.0 40 ATAGGCG 20 7.02658E-4 45.0 12 CATGCGG 20 7.02658E-4 45.0 2 CGTGAGT 20 7.02658E-4 45.0 32 CGCATGG 20 7.02658E-4 45.0 2 GGACTAG 20 7.02658E-4 45.0 1 TGAACTA 20 7.02658E-4 45.0 29 TAAGTCC 25 3.8852482E-5 45.0 23 CGCGAGG 40 6.7921064E-9 45.0 2 ACGGGCC 25 3.8852482E-5 45.0 5 ATCGTGA 20 7.02658E-4 45.0 30 GTAATCG 20 7.02658E-4 45.0 15 TGTTGCG 20 7.02658E-4 45.0 1 >>END_MODULE