##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935894.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 850533 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.023385336018706 33.0 31.0 34.0 30.0 34.0 2 32.061890602716176 33.0 31.0 34.0 30.0 34.0 3 32.07610051579422 33.0 31.0 34.0 30.0 34.0 4 35.76062892327517 37.0 35.0 37.0 33.0 37.0 5 33.688722248284314 37.0 35.0 37.0 32.0 37.0 6 34.65997674399465 37.0 35.0 37.0 30.0 37.0 7 35.76923646701539 37.0 35.0 37.0 33.0 37.0 8 35.806350841178414 37.0 35.0 37.0 35.0 37.0 9 37.73385394805375 39.0 38.0 39.0 35.0 39.0 10 37.24264549406078 39.0 37.0 39.0 34.0 39.0 11 37.183721266546975 39.0 37.0 39.0 34.0 39.0 12 37.2767923172881 39.0 37.0 39.0 34.0 39.0 13 37.30524388824419 39.0 37.0 39.0 34.0 39.0 14 38.47196992944424 40.0 38.0 41.0 34.0 41.0 15 38.542221171900444 40.0 38.0 41.0 34.0 41.0 16 38.508429420140075 40.0 38.0 41.0 34.0 41.0 17 38.46286622623696 40.0 38.0 41.0 34.0 41.0 18 38.421579174470594 40.0 38.0 41.0 34.0 41.0 19 38.31264395385011 40.0 37.0 41.0 34.0 41.0 20 38.336722972536045 40.0 37.0 41.0 34.0 41.0 21 38.25240878366859 40.0 37.0 41.0 34.0 41.0 22 38.32277289652488 40.0 37.0 41.0 34.0 41.0 23 38.31101086024881 40.0 37.0 41.0 34.0 41.0 24 38.27877930662302 40.0 37.0 41.0 34.0 41.0 25 38.10069920861389 40.0 37.0 41.0 34.0 41.0 26 38.181861256412155 40.0 37.0 41.0 34.0 41.0 27 38.18545547321503 40.0 37.0 41.0 34.0 41.0 28 38.1009190707474 40.0 37.0 41.0 34.0 41.0 29 38.10084735101401 40.0 37.0 41.0 34.0 41.0 30 37.94714961089105 40.0 37.0 41.0 34.0 41.0 31 37.912491343663326 40.0 37.0 41.0 33.0 41.0 32 37.7989578299725 40.0 37.0 41.0 33.0 41.0 33 37.685262065081545 40.0 37.0 41.0 33.0 41.0 34 37.55740929511259 40.0 37.0 41.0 33.0 41.0 35 37.42589058860738 40.0 37.0 41.0 33.0 41.0 36 37.330987745331456 40.0 36.0 41.0 33.0 41.0 37 37.315991266652794 40.0 36.0 41.0 32.0 41.0 38 37.21298409350372 40.0 36.0 41.0 32.0 41.0 39 37.16436046573149 40.0 36.0 41.0 32.0 41.0 40 37.07729623659517 40.0 36.0 41.0 31.0 41.0 41 36.97402569917922 40.0 36.0 41.0 31.0 41.0 42 36.97655352584791 40.0 36.0 41.0 31.0 41.0 43 36.943263812221275 40.0 36.0 41.0 31.0 41.0 44 36.84310661667448 40.0 35.0 41.0 31.0 41.0 45 36.77672823982138 39.0 35.0 41.0 31.0 41.0 46 36.68643309548248 39.0 35.0 41.0 31.0 41.0 47 36.61100745062214 39.0 35.0 41.0 31.0 41.0 48 36.5474614153713 39.0 35.0 41.0 31.0 41.0 49 36.46707887877366 39.0 35.0 41.0 30.0 41.0 50 36.37315894856519 39.0 35.0 41.0 30.0 41.0 51 35.222647445778115 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 6.0 10 15.0 11 10.0 12 7.0 13 12.0 14 14.0 15 30.0 16 46.0 17 78.0 18 198.0 19 349.0 20 653.0 21 1135.0 22 1725.0 23 2437.0 24 3559.0 25 5288.0 26 7361.0 27 8709.0 28 9341.0 29 9933.0 30 11581.0 31 14242.0 32 18868.0 33 26049.0 34 42964.0 35 56424.0 36 60947.0 37 94841.0 38 172465.0 39 301046.0 40 196.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.14788491451831 18.545664894836534 23.968734899174986 14.337715291470172 2 31.524585171886333 25.926095754074208 25.44557354035646 17.103745533682996 3 31.324240211726057 25.71234743390321 27.505693488671223 15.457718865699507 4 26.274700687686426 25.20842812683341 29.57004607698937 18.946825108490795 5 24.671941006404218 33.675001440273334 24.191653939353323 17.46140361396912 6 24.525679779620543 34.95466960129707 24.982687326652815 15.53696329242957 7 81.45586355849802 4.324464776792905 10.298836141572403 3.9208355231366685 8 82.90718878632575 4.91256659059672 8.402025553388286 3.778219069689242 9 77.15996910172798 6.546953498570895 9.896265047917012 6.396812351784116 10 33.14650930651721 38.44718547075775 16.229235079650053 12.177070143074989 11 24.444201459555362 26.04637327417043 32.11727234569382 17.39215292058039 12 22.685892258148712 24.00635836587175 33.059622613114364 20.24812676286517 13 22.066045644319505 25.40947852699425 35.14549112144973 17.378984707236523 14 19.402069055521658 29.152895889988983 31.534461331894235 19.910573722595124 15 18.049623001106365 27.87769551563549 35.25624520153833 18.816436281719813 16 22.080389590997644 28.431230769411652 30.51992103774927 18.968458601841434 17 21.438321617150656 27.701688235494682 30.39611631765023 20.463873829704433 18 23.237546338590036 24.906970099925577 31.340465331739036 20.515018229745348 19 20.822590069991406 28.23817535592387 29.876089463900872 21.06314511018385 20 23.136198125175625 27.688990315484524 30.317342184253874 18.857469375085977 21 22.19796292442504 28.694477462955582 30.97104991811017 18.136509694509208 22 22.391135911246245 24.567888606320977 31.314951918385297 21.726023564047487 23 19.759139269140643 28.614997889558662 30.952473331428642 20.673389509872045 24 20.06365420271759 26.290808234365983 32.30797629251305 21.337561270403384 25 19.154459615323567 29.866918743893535 30.101124824080898 20.877496816702 26 20.167824176134257 27.76941047554886 29.911126317262234 22.151639031054646 27 21.041981910166918 27.407167035259068 29.819301543855442 21.731549510718573 28 18.449137188092642 27.899211435652703 31.131890238238846 22.51976113801581 29 19.693886069088443 26.1097453008878 30.53896791776451 23.657400712259253 30 20.81388964331778 27.905913115658066 29.956039330631494 21.32415791039266 31 23.291630071966637 27.239860181791887 27.413280848597292 22.055228897644184 32 21.50627900387169 27.787281622229827 28.48731324945652 22.219126124441967 33 20.38145492297183 28.544924182835942 27.914025675664554 23.159595218527677 34 21.52485559055322 27.430681701944547 29.298216530105243 21.746246177396998 35 19.459915135567933 28.48096428945144 29.692322343753858 22.366798231226774 36 20.83775703000354 30.67041490453633 27.40199380858826 21.089834256871868 37 20.240484496192387 29.209213516700704 28.925273916473554 21.625028070633356 38 20.778382496622704 29.354181436816678 28.31001266264801 21.55742340391261 39 21.680992977344797 27.771879515550836 27.97986674238389 22.567260764720476 40 22.41194639126289 27.07608052832753 30.321574824257258 20.19039825615232 41 20.41355244299751 27.956822369032125 28.778307249689313 22.851317938281053 42 21.669353217335484 26.88102636817149 29.945340157289607 21.504280257203423 43 21.527677350555475 27.55707303537899 28.507653436139456 22.407596177926077 44 21.460072683834724 26.896898768184187 28.351163329347596 23.291865218633493 45 21.14380041691504 26.35888319442044 28.09532375580959 24.401992632854927 46 22.49048537799239 27.36025527522154 27.39305823524778 22.756201111538292 47 19.855902122551388 27.26913594181531 30.810562317981784 22.06439961765152 48 20.516899403080185 26.95803690156643 29.548295010305303 22.976768685048082 49 21.911436710862482 25.257691353539485 30.801979464641583 22.028892470956446 50 19.835797082535304 26.62177716796409 30.452081224361667 23.090344525138942 51 20.21508865617207 24.860175913221475 28.973361409845356 25.951374020761097 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 157.0 1 447.5 2 738.0 3 4076.0 4 7414.0 5 5071.0 6 2728.0 7 2695.5 8 2663.0 9 2648.5 10 2634.0 11 2670.0 12 2706.0 13 2642.5 14 2579.0 15 2473.5 16 2368.0 17 2462.5 18 2557.0 19 2601.0 20 2645.0 21 2932.0 22 3219.0 23 4046.0 24 4873.0 25 5752.0 26 7903.5 27 9176.0 28 11109.0 29 13042.0 30 15640.0 31 18238.0 32 21055.5 33 23873.0 34 27317.5 35 30762.0 36 33223.5 37 35685.0 38 37827.5 39 39970.0 40 43168.0 41 46366.0 42 50011.5 43 53657.0 44 57478.5 45 61300.0 46 75304.5 47 89309.0 48 84808.5 49 80308.0 50 79589.5 51 78871.0 52 70492.5 53 62114.0 54 54560.0 55 47006.0 56 40346.5 57 33687.0 58 29674.5 59 25662.0 60 22322.0 61 18982.0 62 16459.5 63 13937.0 64 11711.0 65 9485.0 66 7663.5 67 5842.0 68 4730.0 69 3618.0 70 2823.0 71 2028.0 72 1717.0 73 1406.0 74 1229.5 75 869.0 76 685.0 77 519.5 78 354.0 79 240.5 80 127.0 81 77.0 82 27.0 83 31.5 84 36.0 85 22.5 86 9.0 87 5.5 88 2.0 89 2.0 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 850533.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.41804078026092 #Duplication Level Percentage of deduplicated Percentage of total 1 72.86983512939727 23.622972868756904 2 9.674725226786236 6.272712738795505 3 3.654045232597569 3.553709620897979 4 2.0062632861219925 2.601565001017721 5 1.2525730095632535 2.0302981452137847 6 1.0091743475224677 1.9629273091425938 7 0.7986297792804239 1.8123008927130486 8 0.6626700189154203 1.7185970957645094 9 0.6093806641695123 1.7779434499574758 >10 7.319935524724026 47.46167194289937 >50 0.10762494670658387 2.186196278234111 >100 0.029651766369075756 1.646945386929197 >500 0.0021964271384499793 0.49771501317055106 >1k 0.0029285695179333054 2.117246912249833 >5k 3.660711897416632E-4 0.7371973442573827 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTC 6212 0.7303655472509591 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3934 0.4625334937033601 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGC 3426 0.402806240322245 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCG 3133 0.36835725362801913 No Hit GCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCTGC 2079 0.24443496019554795 TruSeq Adapter, Index 15 (95% over 23bp) GAACTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCT 1921 0.22585837351402002 No Hit GAATGCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTT 1176 0.13826624011061298 No Hit CCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCTGC 1163 0.1367377867760569 TruSeq Adapter, Index 15 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCTG 1009 0.11863149342823853 No Hit CTGTCTCTTATACACATCTGACGCCAGCAGTATCGTATGCCGTCTTCTGCT 854 0.10040762674699277 TruSeq Adapter, Index 14 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.35146666854784E-4 0.0 0.0 0.10828504008662804 0.0 2 2.35146666854784E-4 0.0 0.0 0.5939804804751844 0.0 3 2.35146666854784E-4 0.0 0.0 0.8814472807051579 0.0 4 2.35146666854784E-4 0.0 0.0 1.3953603211162882 0.0 5 2.35146666854784E-4 0.0 0.0 2.8455098156097414 0.0 6 2.35146666854784E-4 0.0 0.0 3.7850383230280307 0.0 7 2.35146666854784E-4 0.0 0.0 4.550911016974062 0.0 8 2.35146666854784E-4 0.0 0.0 5.750159017933461 0.0 9 2.35146666854784E-4 0.0 0.0 6.249257818332739 0.0 10 2.35146666854784E-4 0.0 0.0 7.531395019358449 0.0 11 2.35146666854784E-4 0.0 0.0 8.504784646803827 0.0 12 2.35146666854784E-4 0.0 0.0 9.815727314519249 0.0 13 2.35146666854784E-4 0.0 0.0 10.270383394882973 0.0 14 2.35146666854784E-4 0.0 0.0 10.493067288394453 0.0 15 2.35146666854784E-4 0.0 0.0 10.802873021975632 0.0 16 2.35146666854784E-4 0.0 0.0 11.301854249041483 0.0 17 3.52720000282176E-4 0.0 0.0 11.96108792956887 0.0 18 3.52720000282176E-4 0.0 0.0 12.617147130093718 0.0 19 3.52720000282176E-4 0.0 0.0 13.133176490506541 0.0 20 3.52720000282176E-4 0.0 0.0 13.56467062418507 0.0 21 3.52720000282176E-4 0.0 0.0 14.06694390458689 0.0 22 3.52720000282176E-4 0.0 0.0 14.646345291717076 0.0 23 3.52720000282176E-4 0.0 0.0 15.200938705494083 0.0 24 3.52720000282176E-4 0.0 0.0 15.643014439181078 0.0 25 3.52720000282176E-4 0.0 0.0 16.039706866165098 0.0 26 3.52720000282176E-4 0.0 0.0 16.410885879795376 0.0 27 3.52720000282176E-4 0.0 0.0 16.82403857345923 0.0 28 3.52720000282176E-4 0.0 0.0 17.214264467104744 0.0 29 3.52720000282176E-4 0.0 0.0 17.63012134743743 0.0 30 3.52720000282176E-4 0.0 0.0 18.178013081209077 0.0 31 3.52720000282176E-4 0.0 0.0 18.637607241576752 0.0 32 4.70293333709568E-4 0.0 0.0 19.10072860194725 0.0 33 4.70293333709568E-4 0.0 0.0 19.541746175633396 0.0 34 5.8786666713696E-4 0.0 0.0 19.97030097597624 0.0 35 5.8786666713696E-4 0.0 0.0 20.434833216347865 0.0 36 5.8786666713696E-4 0.0 0.0 20.846927750010874 0.0 37 5.8786666713696E-4 0.0 0.0 21.26689969701352 0.0 38 5.8786666713696E-4 0.0 0.0 21.712972924037047 0.0 39 5.8786666713696E-4 0.0 0.0 22.199373804426166 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACG 20 7.03225E-4 45.0 1 TATTGCG 55 1.8189894E-12 45.0 1 TTACGCG 20 7.03225E-4 45.0 1 AGTACGG 60 0.0 44.999996 2 CGCACGG 95 0.0 42.63158 2 CGTTTTT 2685 0.0 42.486034 1 TTGTACG 55 6.002665E-11 40.909092 1 GCACGCG 50 1.0804797E-9 40.500004 1 TACGCGG 95 0.0 40.263157 2 TCGCGCG 45 1.9272193E-8 40.000004 1 GACGGGT 85 0.0 39.705883 4 TTTCGCG 40 3.4568075E-7 39.375 1 AGGCGAT 40 3.4568075E-7 39.375 6 CTTACGG 80 0.0 39.375 2 CGAAAGG 180 0.0 38.750004 2 ACGGGAA 630 0.0 38.57143 5 TGATCGA 35 6.2463732E-6 38.571426 21 CGGCGAA 35 6.2463732E-6 38.571426 31 CGACAGG 70 0.0 38.571426 2 AATAGCG 35 6.2463732E-6 38.571426 1 >>END_MODULE