##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935893.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 339989 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.80464662092009 33.0 31.0 34.0 30.0 34.0 2 31.866339793346256 33.0 31.0 34.0 30.0 34.0 3 31.910917706161083 33.0 31.0 34.0 30.0 34.0 4 35.61125507001697 37.0 35.0 37.0 33.0 37.0 5 33.539746874163576 37.0 35.0 37.0 32.0 37.0 6 34.527775898632015 37.0 35.0 37.0 30.0 37.0 7 35.64898570247861 37.0 35.0 37.0 32.0 37.0 8 35.63957069199298 37.0 35.0 37.0 33.0 37.0 9 37.507648776872195 39.0 37.0 39.0 35.0 39.0 10 37.07950257214204 39.0 37.0 39.0 33.0 39.0 11 37.121053916450236 39.0 37.0 39.0 34.0 39.0 12 36.99043204338964 39.0 35.0 39.0 33.0 39.0 13 36.84702446255614 39.0 35.0 39.0 33.0 39.0 14 37.860927853548205 40.0 37.0 41.0 33.0 41.0 15 37.99081440870146 40.0 37.0 41.0 33.0 41.0 16 38.03204809567368 40.0 36.0 41.0 33.0 41.0 17 38.018371182597086 40.0 36.0 41.0 33.0 41.0 18 38.00928265326231 40.0 36.0 41.0 34.0 41.0 19 37.92095038368888 40.0 36.0 41.0 34.0 41.0 20 37.95619270035207 40.0 36.0 41.0 34.0 41.0 21 37.89279359038087 40.0 36.0 41.0 34.0 41.0 22 37.95721626287909 40.0 36.0 41.0 34.0 41.0 23 37.957678042524904 40.0 36.0 41.0 34.0 41.0 24 37.88922876916606 40.0 36.0 41.0 34.0 41.0 25 37.701034445232054 39.0 36.0 41.0 33.0 41.0 26 37.76805131930739 40.0 36.0 41.0 33.0 41.0 27 37.75215962869387 40.0 36.0 41.0 33.0 41.0 28 37.65587416063461 40.0 36.0 41.0 33.0 41.0 29 37.680895558385714 40.0 36.0 41.0 33.0 41.0 30 37.55195903396874 40.0 36.0 41.0 33.0 41.0 31 37.46291203538938 39.0 35.0 41.0 33.0 41.0 32 37.40818085290995 39.0 35.0 41.0 33.0 41.0 33 37.33583145337055 39.0 35.0 41.0 33.0 41.0 34 37.23657235969399 39.0 35.0 41.0 33.0 41.0 35 37.2261102565083 40.0 35.0 41.0 33.0 41.0 36 37.09694431290424 39.0 35.0 41.0 32.0 41.0 37 37.015494618943556 39.0 35.0 41.0 32.0 41.0 38 36.919688578159885 39.0 35.0 41.0 31.0 41.0 39 36.92763589410246 39.0 35.0 41.0 32.0 41.0 40 36.85235992929183 39.0 35.0 41.0 31.0 41.0 41 36.756692128274736 39.0 35.0 41.0 31.0 41.0 42 36.75827453241134 39.0 35.0 41.0 31.0 41.0 43 36.68313092482404 39.0 35.0 41.0 31.0 41.0 44 36.52661997888167 39.0 35.0 41.0 31.0 41.0 45 36.486468679869056 39.0 35.0 41.0 31.0 41.0 46 36.421431281600285 39.0 35.0 40.0 31.0 41.0 47 36.323710472985894 39.0 35.0 40.0 31.0 41.0 48 36.2748912464815 38.0 35.0 40.0 31.0 41.0 49 36.17981758233355 38.0 35.0 40.0 30.0 41.0 50 36.03568938995085 38.0 35.0 40.0 30.0 41.0 51 34.78510187094288 37.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 4.0 10 8.0 11 3.0 12 5.0 13 7.0 14 7.0 15 8.0 16 21.0 17 27.0 18 60.0 19 108.0 20 309.0 21 436.0 22 673.0 23 944.0 24 1330.0 25 1924.0 26 2487.0 27 3134.0 28 3514.0 29 4260.0 30 5339.0 31 6856.0 32 9359.0 33 13098.0 34 22878.0 35 31462.0 36 26433.0 37 39778.0 38 67848.0 39 97619.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.537846812691 19.847112700705022 24.268726341146333 13.346314145457647 2 29.83067099229681 26.034077573097953 25.987899608516745 18.14735182608849 3 30.680404366023605 25.802305368703106 26.82939742168129 16.687892843591996 4 26.857045374997423 24.83227398533482 29.828906229319184 18.48177441034857 5 24.884922747500653 32.337516802014186 24.412848650985765 18.364711799499396 6 23.836947665953897 34.837009432658114 25.29405363114689 16.031989270241095 7 77.11220068884582 5.077811340955148 12.5227580892323 5.287229880966738 8 76.48600395895161 6.491974740359247 10.039442452549935 6.982578848139205 9 70.6955225021986 6.260790790290274 12.952772001447105 10.09091470606402 10 38.44036130580695 25.904955748568337 20.155063840300716 15.499619105323994 11 31.064240313657205 22.85250405160167 25.96436943548174 20.118886199259386 12 27.352943771710258 20.294774242696086 30.603931303659827 21.74835068193383 13 22.013359255740628 25.885249228651514 33.5478500775025 18.553541438105352 14 18.698840256596537 30.127445299700874 28.61769057234205 22.556023871360544 15 15.782275308907053 25.399057028315625 38.90890587636659 19.909761786410737 16 18.713546614743418 24.429319772110276 33.19636811779205 23.660765495354262 17 18.74148869522249 23.91842089008762 29.808611455076488 27.5314789596134 18 20.496545476471297 23.459582515904927 33.17930874234166 22.86456326528211 19 20.593607440240714 26.380559371038476 28.666809808552628 24.359023380168182 20 22.53278782548847 26.156728600042946 30.21185979546397 21.098623779004615 21 21.420398895258376 27.995611622728973 29.481836177052788 21.102153304959867 22 18.836491768851346 24.929630076267173 29.510072384694798 26.723805770186683 23 18.895023074275933 27.215880513781325 28.660339010968 25.22875740097474 24 20.7639070675816 23.4234048748636 31.318072055272378 24.494616002282427 25 17.770280803202457 27.931491901208567 29.515660800790616 24.78256649479836 26 18.440008353211425 25.64288844639091 29.578604013659266 26.338499186738396 27 21.521872766471855 27.33647265058575 27.935021427163818 23.20663315577857 28 16.847015638741254 26.84410377982817 32.5557591569139 23.753121424516678 29 19.0526752336105 22.757500977972818 30.993649794552177 27.19617399386451 30 21.766586566035958 26.493798328769458 29.934497880813794 21.805117224380787 31 22.076596595772216 27.953845565591827 25.74436231760439 24.225195521031562 32 22.949860142534025 25.61612287456359 27.378826962048773 24.055190020853615 33 23.763415875219494 24.773154425584355 27.29470659344861 24.16872310574754 34 19.051498724958748 26.55703566880105 28.555041486636334 25.83642411960387 35 20.026530270096973 23.27075287729897 28.419154737359147 28.283562115244905 36 24.300786201906533 25.482000888264032 27.455005897249617 22.762207012579818 37 20.86743982893564 27.587363120571545 30.41539579221681 21.129801258276004 38 18.68325151696084 27.603540114533114 29.020938912729527 24.69226945577651 39 21.34598472303516 25.424940218654136 31.4589589663195 21.770116091991213 40 21.04979866995697 23.176926312321868 30.865998605837248 24.907276411883913 41 20.080061413751622 25.28287679895526 26.756748012435693 27.880313774857424 42 22.507492889475834 22.58867198644662 27.893549497189614 27.01028562688793 43 24.528146498857318 22.428078555482678 28.918582660027237 24.12519228563277 44 20.256831838677133 24.4904982220013 30.044501439752462 25.208168499569105 45 19.33827270882293 24.285785716596713 28.500333834329933 27.87560774025042 46 23.623117218498248 24.370788466685685 28.696810779172267 23.3092835356438 47 18.670604048954527 24.15166373029716 32.44310845350879 24.734623767239526 48 21.03950421925415 22.981625876131286 29.0715287847548 26.907341119859762 49 21.418340005117813 20.899205562532906 32.95312495404263 24.72932947830665 50 20.619784757742163 21.26245260876087 31.632199865289763 26.485562768207206 51 18.922082773266194 22.050713405433704 28.83740356305645 30.18980025824365 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 152.0 1 281.0 2 410.0 3 1134.0 4 1858.0 5 1254.5 6 651.0 7 680.5 8 710.0 9 715.5 10 721.0 11 738.5 12 756.0 13 751.5 14 747.0 15 840.0 16 933.0 17 817.0 18 701.0 19 741.5 20 782.0 21 807.5 22 833.0 23 996.5 24 1160.0 25 1394.0 26 1765.5 27 1903.0 28 2151.0 29 2399.0 30 3150.5 31 3902.0 32 4766.5 33 5631.0 34 6627.0 35 7623.0 36 7976.5 37 8330.0 38 10081.5 39 11833.0 40 13314.5 41 14796.0 42 17684.0 43 20572.0 44 23583.5 45 26595.0 46 34380.5 47 42166.0 48 42321.0 49 42476.0 50 41730.0 51 40984.0 52 33231.5 53 25479.0 54 21913.5 55 18348.0 56 16395.5 57 14443.0 58 12604.5 59 10766.0 60 9675.5 61 8585.0 62 7989.0 63 7393.0 64 6177.5 65 4962.0 66 4273.5 67 3585.0 68 2775.0 69 1965.0 70 1670.0 71 1375.0 72 1141.5 73 908.0 74 681.0 75 352.5 76 251.0 77 180.5 78 110.0 79 79.0 80 48.0 81 50.5 82 53.0 83 28.0 84 3.0 85 2.5 86 2.0 87 1.5 88 1.0 89 1.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 339989.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.887790725170984 #Duplication Level Percentage of deduplicated Percentage of total 1 66.88256172370433 20.658545696851103 2 14.151985346568086 8.742471234609628 3 5.465903502073705 5.064890504880953 4 2.6690168405700447 3.297601344539384 5 1.555965962702735 2.403017551572564 6 0.9236979954756893 1.7118594226507813 7 0.6967383495002298 1.5064495830694895 8 0.552411671230121 1.3650220876078347 9 0.46482173305549945 1.2921584773616603 >10 6.441811124511737 44.45602457765045 >50 0.1453189774936132 2.887142131066265 >100 0.0408087539536859 2.3060859466646844 >500 0.0029860063868550656 0.6327056230150541 >1k 0.005972012773710131 3.676025818460156 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGC 2671 0.7856136522063949 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCG 2298 0.675904220430661 No Hit GAATCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTC 2263 0.6656097697278441 No Hit GCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 2239 0.6585507178173412 No Hit CCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 1464 0.4306021665406822 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1022 0.3005979605222522 No Hit CTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGCT 896 0.2635379379921115 No Hit TCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 646 0.1900061472577054 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCT 516 0.15176961607581424 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGATTACGT 445 0.13088658750724289 No Hit GAACTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCT 387 0.11382721205686067 No Hit ACTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTCTTCTGC 386 0.11353308489392305 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGATTACGTCGTA 386 0.11353308489392305 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGATTACGTCGTATGCCGTC 376 0.1105918132645468 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.941271629376245E-4 0.0 0.0 0.28412683939774525 0.0 2 2.941271629376245E-4 0.0 0.0 1.7709396480474369 0.0 3 2.941271629376245E-4 0.0 0.0 2.3177220439484807 0.0 4 2.941271629376245E-4 0.0 0.0 3.1227480889087587 0.0 5 2.941271629376245E-4 0.0 0.0 5.485765715949634 0.0 6 2.941271629376245E-4 0.0 0.0 6.650509281182626 0.0 7 2.941271629376245E-4 0.0 0.0 7.985258346593566 0.0 8 2.941271629376245E-4 0.0 0.0 10.162387606657862 0.0 9 2.941271629376245E-4 0.0 0.0 10.913294253637618 0.0 10 2.941271629376245E-4 0.0 0.0 13.186014841656641 0.0 11 2.941271629376245E-4 0.0 0.0 15.121959828112086 0.0 12 2.941271629376245E-4 0.0 0.0 17.53203780122298 0.0 13 2.941271629376245E-4 0.0 0.0 18.242354899717345 0.0 14 2.941271629376245E-4 0.0 0.0 18.51383427110877 0.0 15 2.941271629376245E-4 0.0 0.0 19.103853359961647 0.0 16 2.941271629376245E-4 0.0 0.0 20.13594557470977 0.0 17 2.941271629376245E-4 0.0 0.0 21.39745697654924 0.0 18 2.941271629376245E-4 0.0 0.0 22.819267682189718 0.0 19 2.941271629376245E-4 0.0 0.0 23.70811996858722 0.0 20 2.941271629376245E-4 0.0 0.0 24.495204256608304 0.0 21 2.941271629376245E-4 0.0 0.0 25.35729097117848 0.0 22 2.941271629376245E-4 0.0 0.0 26.227907373473847 0.0 23 2.941271629376245E-4 0.0 0.0 27.186761924650504 0.0 24 2.941271629376245E-4 0.0 0.0 27.927962375253315 0.0 25 2.941271629376245E-4 0.0 0.0 28.584454202930093 0.0 26 2.941271629376245E-4 0.0 0.0 29.173885037457094 0.0 27 2.941271629376245E-4 0.0 0.0 29.79861113153661 0.0 28 2.941271629376245E-4 0.0 0.0 30.40510134151399 0.0 29 2.941271629376245E-4 0.0 0.0 31.021297747868314 0.0 30 2.941271629376245E-4 0.0 0.0 31.774851539314508 0.0 31 2.941271629376245E-4 0.0 0.0 32.40604843097865 0.0 32 2.941271629376245E-4 0.0 0.0 33.01400927677072 0.0 33 2.941271629376245E-4 0.0 0.0 33.606675510090035 0.0 34 2.941271629376245E-4 0.0 0.0 34.18434125809953 0.0 35 2.941271629376245E-4 0.0 0.0 34.804949571897914 0.0 36 2.941271629376245E-4 0.0 0.0 35.377615158137466 0.0 37 2.941271629376245E-4 0.0 0.0 35.90645579709932 0.0 38 2.941271629376245E-4 0.0 0.0 36.45264993867448 0.0 39 2.941271629376245E-4 0.0 0.0 37.01972710881822 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTCC 60 0.0 45.000004 6 ATCTACC 25 3.8849903E-5 45.000004 15 GGGTCGT 25 3.8849903E-5 45.000004 7 GTTAGCG 30 2.1609758E-6 45.000004 1 ATGTCCG 25 3.8849903E-5 45.000004 11 GTTACGG 30 2.1609758E-6 45.000004 2 CGGATGG 30 2.1609758E-6 45.000004 2 TACGAAT 50 2.1827873E-11 45.000004 12 ATGCAGC 30 2.1609758E-6 45.000004 42 GTACGAG 25 3.8849903E-5 45.000004 1 GCATATC 50 2.1827873E-11 45.000004 28 TCACGAC 20 7.0262706E-4 45.0 25 CGACGGT 20 7.0262706E-4 45.0 28 TTCCGTA 20 7.0262706E-4 45.0 18 ATATGCG 20 7.0262706E-4 45.0 1 TCCTAAG 20 7.0262706E-4 45.0 20 AATGCGG 40 6.7902874E-9 45.0 2 CCGTACA 20 7.0262706E-4 45.0 20 TACGAAA 20 7.0262706E-4 45.0 20 CGAGGGT 45 3.8380676E-10 45.0 4 >>END_MODULE