##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935892.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1174040 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.955224694218256 33.0 31.0 34.0 30.0 34.0 2 32.01822254778372 33.0 31.0 34.0 30.0 34.0 3 31.958808047425983 33.0 31.0 34.0 30.0 34.0 4 35.70409355728936 37.0 35.0 37.0 33.0 37.0 5 33.629105481925656 37.0 35.0 37.0 32.0 37.0 6 34.623243671425165 37.0 35.0 37.0 30.0 37.0 7 35.72868897141495 37.0 35.0 37.0 32.0 37.0 8 35.78678835474089 37.0 35.0 37.0 35.0 37.0 9 37.664664747368064 39.0 37.0 39.0 35.0 39.0 10 37.24724796429423 39.0 37.0 39.0 34.0 39.0 11 37.246589554018605 39.0 37.0 39.0 34.0 39.0 12 37.24125498279445 39.0 37.0 39.0 34.0 39.0 13 37.24787741473885 39.0 37.0 39.0 34.0 39.0 14 38.30828677046779 40.0 38.0 41.0 33.0 41.0 15 38.42719754011788 40.0 38.0 41.0 34.0 41.0 16 38.395943920139004 40.0 38.0 41.0 34.0 41.0 17 38.37324281966543 40.0 38.0 41.0 34.0 41.0 18 38.253294606657356 40.0 38.0 41.0 34.0 41.0 19 38.05993066675752 40.0 37.0 41.0 34.0 41.0 20 38.02135532009131 40.0 36.0 41.0 34.0 41.0 21 37.884917890361486 40.0 36.0 41.0 33.0 41.0 22 37.958500562161426 40.0 36.0 41.0 34.0 41.0 23 37.95740434738169 40.0 36.0 41.0 34.0 41.0 24 37.902867023270076 40.0 35.0 41.0 34.0 41.0 25 37.69392184252666 39.0 35.0 41.0 33.0 41.0 26 37.749401212905866 40.0 35.0 41.0 33.0 41.0 27 37.748084392354606 40.0 35.0 41.0 34.0 41.0 28 37.61250894347722 40.0 35.0 41.0 33.0 41.0 29 37.55148717249838 40.0 35.0 41.0 33.0 41.0 30 37.351272529045005 39.0 35.0 41.0 33.0 41.0 31 37.2398044359647 39.0 35.0 41.0 33.0 41.0 32 37.061967224285375 39.0 35.0 41.0 32.0 41.0 33 36.82114663895608 39.0 35.0 41.0 31.0 41.0 34 36.541607611325 39.0 35.0 41.0 30.0 41.0 35 36.38259684508194 39.0 35.0 41.0 30.0 41.0 36 36.217007938400734 39.0 35.0 41.0 30.0 41.0 37 36.14640983271439 39.0 35.0 41.0 29.0 41.0 38 36.021132159040576 39.0 35.0 41.0 29.0 41.0 39 35.94184014173282 39.0 35.0 41.0 28.0 41.0 40 35.86413069401383 39.0 35.0 41.0 28.0 41.0 41 35.72118241286498 39.0 35.0 41.0 27.0 41.0 42 35.68980869476338 39.0 35.0 41.0 27.0 41.0 43 35.62195581070492 39.0 35.0 41.0 27.0 41.0 44 35.46667660386358 39.0 35.0 41.0 26.0 41.0 45 35.40787792579469 38.0 35.0 40.0 26.0 41.0 46 35.320345984804604 38.0 35.0 40.0 25.0 41.0 47 35.27880566249872 38.0 35.0 40.0 25.0 41.0 48 35.176604715341895 38.0 35.0 40.0 25.0 41.0 49 35.05933869374127 38.0 35.0 40.0 24.0 41.0 50 34.96098599706995 38.0 34.0 40.0 24.0 41.0 51 33.82799052843174 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 14.0 9 26.0 10 25.0 11 22.0 12 19.0 13 30.0 14 42.0 15 57.0 16 91.0 17 198.0 18 365.0 19 664.0 20 1181.0 21 1895.0 22 2970.0 23 4498.0 24 7133.0 25 11891.0 26 17132.0 27 20164.0 28 20037.0 29 19291.0 30 20595.0 31 24202.0 32 30141.0 33 41953.0 34 69127.0 35 83081.0 36 92515.0 37 137422.0 38 229469.0 39 337607.0 40 182.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.89685189601717 18.43403972607407 21.874126946270998 19.794981431637765 2 36.93647575891792 22.479387414398147 23.09342100780212 17.49071581888181 3 30.339170726721402 22.088174167830736 31.294504446185822 16.278150659262035 4 26.020237811318182 24.410667438928826 31.081479336308814 18.487615413444175 5 22.23416578651494 31.942097373172974 28.117185104425747 17.706551735886343 6 23.609928111478315 31.646962624782805 29.519437157166706 15.223672106572177 7 75.53226465878505 5.059793533440087 14.438434806309836 4.969507001465026 8 76.90879356751049 4.189124731695683 13.850209532894961 5.051872167898879 9 70.92969575142244 6.180879697454942 16.39594903069742 6.493475520425199 10 35.44896255664202 26.56791932131784 22.23212156314947 15.750996558890668 11 26.608718612653742 22.76140506285987 31.08301250383292 19.54686382065347 12 23.47747947259037 20.76717999386733 34.807502299751285 20.947838233791014 13 22.690453476883242 21.32559367653572 36.630694013832574 19.35325883274846 14 19.26808285918708 24.370464379407856 35.76726516984089 20.59418759156417 15 18.549112466355492 23.241456849851794 37.77281864331709 20.436612040475623 16 22.477939422847605 23.24733399202753 34.364331709311436 19.91039487581343 17 22.313805321794828 24.037681850703553 32.541310347177266 21.10720248032435 18 24.2323089502913 22.631426527205207 32.727334673435315 20.408929849068176 19 22.084256073046916 26.190760110388062 30.495468638206535 21.229515178358486 20 23.14597458348949 25.397686620558073 30.816837586453616 20.639501209498825 21 22.461841163844504 26.197233484378728 31.97429389117918 19.366631460597596 22 22.159040577833807 22.537477428367005 32.36235562672481 22.94112636707438 23 20.422728356785118 25.837279820108343 32.085107832782526 21.65488399032401 24 20.57238254233246 23.88351333855746 33.205768116929576 22.338336002180505 25 22.055807297877415 25.481670130489594 30.60662328370413 21.855899287928864 26 20.753551838097508 24.534768832407757 31.01955640352969 23.692122925965045 27 21.445095567442333 23.787605192327348 31.446202855098633 23.321096385131682 28 20.12359033763756 25.34061871827195 31.31741678307383 23.218374161016662 29 20.95397090388743 25.666842697012026 30.449388436509828 22.929797962590712 30 22.147286293482335 24.50734216892099 30.889833395795712 22.45553814180096 31 22.273857790194544 25.605515996047835 28.778150659262035 23.342475554495586 32 21.422268406527888 26.369800006814074 29.76261456168444 22.445317024973598 33 21.068873292221728 24.492351197574187 29.587322408095122 24.851453102108955 34 19.693536847126165 25.774675479540733 30.533542298388472 23.998245374944634 35 20.37034513304487 25.824929303941946 29.46023985554155 24.344485707471637 36 21.781285135089092 27.3416578651494 27.644373275186535 23.232683724574972 37 21.00149909713468 25.89255902694968 29.279326087697182 23.826615788218458 38 21.339988416067595 25.812152907907738 29.625907124118427 23.22195155190624 39 21.53487104357603 23.500136281557698 29.553337194644136 25.41165548022214 40 23.64246533337876 22.664304452999897 30.39947531600286 23.29375489761848 41 20.81590065074444 24.212548124425062 30.05740860618037 24.914142618650132 42 21.70564887056659 25.093182515076144 30.403137882865998 22.798030731491263 43 21.152430922285443 24.227624271745427 31.225171203706857 23.394773602262273 44 22.010834383837008 24.03359340397261 29.92410820755681 24.031464004633573 45 21.73580116520732 23.11829239208204 29.540134918742122 25.605771523968517 46 21.987922046948995 23.950376477803143 28.828148955742567 25.2335525195053 47 21.010527750332187 24.516285646144937 30.48703621682396 23.98615038669892 48 20.679108037204866 24.522247964294234 30.530731491260944 24.26791250723996 49 22.111682736533677 23.164883649620116 30.748952335525193 23.97448127832101 50 20.175292153589318 23.28694081973357 32.043456781711015 24.4943102449661 51 20.256805560287557 22.246942182549144 30.326223978740074 27.170028278423224 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 528.0 1 1213.5 2 1899.0 3 14699.5 4 27500.0 5 17982.0 6 8464.0 7 8225.5 8 7987.0 9 7928.5 10 7870.0 11 7718.5 12 7567.0 13 7296.5 14 7026.0 15 6603.5 16 6181.0 17 5941.5 18 5702.0 19 5513.0 20 5324.0 21 5261.5 22 5199.0 23 5383.0 24 5567.0 25 6049.5 26 7781.0 27 9030.0 28 10241.0 29 11452.0 30 12637.0 31 13822.0 32 15979.5 33 18137.0 34 21555.0 35 24973.0 36 27358.0 37 29743.0 38 33215.0 39 36687.0 40 38885.0 41 41083.0 42 46129.0 43 51175.0 44 58835.5 45 66496.0 46 82681.0 47 98866.0 48 107535.5 49 116205.0 50 115758.5 51 115312.0 52 103018.0 53 90724.0 54 81872.5 55 73021.0 56 67180.0 57 61339.0 58 57240.5 59 53142.0 60 48211.5 61 43281.0 62 39093.5 63 34906.0 64 30561.5 65 26217.0 66 22469.0 67 18721.0 68 15630.5 69 12540.0 70 10729.0 71 8918.0 72 7573.5 73 6229.0 74 5159.0 75 3347.0 76 2605.0 77 1857.5 78 1110.0 79 771.0 80 432.0 81 324.0 82 216.0 83 169.0 84 122.0 85 88.0 86 54.0 87 42.5 88 31.0 89 20.0 90 9.0 91 7.0 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1174040.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.349086967288336 #Duplication Level Percentage of deduplicated Percentage of total 1 73.36810294799747 26.66863554681724 2 9.408051321052767 6.83948151323318 3 3.813850508329058 4.158899514224693 4 2.1641623800052554 3.1466130624857898 5 1.495536442964627 2.718069211403514 6 1.183950110709188 2.582130332345936 7 0.9678642102714413 2.462668624617773 8 0.8327878828021859 2.4216863341824464 9 0.7236545947932344 2.3673765420375372 >10 5.926422424246553 38.76389395716166 >50 0.07916015809877003 1.9124693558365304 >100 0.0318998914613078 2.191079413976068 >500 0.0016789416251017687 0.40252321939862595 >1k 0.0026383368394456365 1.9253460639374609 >5k 0.0 0.0 >10k+ 2.3984880358596697E-4 1.4391273083415896 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16507 1.4059997955776635 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTT 3496 0.2977752035705768 No Hit CGCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTG 3065 0.26106435896562297 No Hit CGTTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTC 2685 0.22869748901229942 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCT 2379 0.2026336411025178 No Hit CCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGC 1903 0.16208987768730196 No Hit GAATCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTC 1765 0.15033559333583182 No Hit CGTCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCT 1743 0.14846172191748153 No Hit GCTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGC 1560 0.13287451875574938 No Hit CTGTCTCTTATACACATCTGACGCACATCCGTTCGTATGCCGTCTTCTGCT 1407 0.11984259480085858 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.2587986780688906E-4 0.0 0.0 0.12682702463289156 0.0 2 4.2587986780688906E-4 0.0 0.0 0.49879050117542845 0.0 3 4.2587986780688906E-4 0.0 0.0 0.9384688766992607 0.0 4 4.2587986780688906E-4 0.0 0.0 1.4082995468638206 0.0 5 4.2587986780688906E-4 0.0 0.0 2.552809103608054 0.0 6 4.2587986780688906E-4 0.0 0.0 4.176092807740792 0.0 7 4.2587986780688906E-4 0.0 0.0 5.418725086027734 0.0 8 4.2587986780688906E-4 0.0 0.0 7.171476269973766 0.0 9 4.2587986780688906E-4 0.0 0.0 8.215818881809819 0.0 10 4.2587986780688906E-4 0.0 0.0 9.628036523457464 0.0 11 4.2587986780688906E-4 0.0 0.0 10.87841981533849 0.0 12 4.2587986780688906E-4 0.0 0.0 11.979830329460667 0.0 13 5.110558413682669E-4 0.0 0.0 12.580576470989064 0.0 14 5.110558413682669E-4 0.0 0.0 12.95381758713502 0.0 15 5.110558413682669E-4 0.0 0.0 13.289496098940411 0.0 16 5.110558413682669E-4 0.0 0.0 13.774573268372457 0.0 17 5.110558413682669E-4 0.0 0.0 14.33102790364894 0.0 18 5.110558413682669E-4 0.0 0.0 14.982453749446357 0.0 19 5.110558413682669E-4 0.0 0.0 15.396664508875336 0.0 20 5.110558413682669E-4 0.0 0.0 15.816582058532928 0.0 21 5.110558413682669E-4 0.0 0.0 16.285475792988315 0.0 22 5.110558413682669E-4 0.0 0.0 16.805560287554087 0.0 23 5.110558413682669E-4 0.0 0.0 17.324281966542877 0.0 24 5.110558413682669E-4 0.0 0.0 17.762341998569045 0.0 25 5.110558413682669E-4 0.0 0.0 18.153214541242207 0.0 26 5.110558413682669E-4 0.0 0.0 18.541276276787844 0.0 27 5.110558413682669E-4 0.0 0.0 18.957871963476542 0.0 28 5.110558413682669E-4 0.0 0.0 19.374552826138803 0.0 29 5.110558413682669E-4 0.0 0.0 19.793192736192974 0.0 30 5.962318149296446E-4 0.0 0.0 20.341385302034002 0.0 31 6.814077884910225E-4 0.0 0.0 20.78625941194508 0.0 32 6.814077884910225E-4 0.0 0.0 21.280620762495314 0.0 33 7.665837620524003E-4 0.0 0.0 21.754965759258628 0.0 34 8.517597356137781E-4 0.0 0.0 22.23288814691152 0.0 35 8.517597356137781E-4 0.0 0.0 22.732104527954753 0.0 36 8.517597356137781E-4 0.0 0.0 23.166161289223535 0.0 37 8.517597356137781E-4 0.0 0.0 23.628496473714694 0.0 38 8.517597356137781E-4 0.0 0.0 24.15241388709073 0.0 39 8.517597356137781E-4 0.0 0.0 24.849408878743485 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAACT 20 7.0333487E-4 45.0 26 CTACGCG 20 7.0333487E-4 45.0 1 CGTTTTT 8275 0.0 42.770393 1 TGCGAAG 70 0.0 41.785713 1 CGTTATT 655 0.0 39.50382 1 GCTAACG 40 3.458299E-7 39.375 1 TACGCGG 110 0.0 38.863636 2 TCGATAG 35 6.248403E-6 38.571426 1 CTAACGG 65 9.094947E-12 38.076927 2 TACGTAG 60 1.5643309E-10 37.500004 1 ACGGGAC 270 0.0 37.5 5 TGCGTAG 55 2.750312E-9 36.81818 1 CACAACG 445 0.0 36.40449 12 TACGGGA 415 0.0 36.325302 4 GCGTTAG 100 0.0 36.000004 1 ACGATAG 25 0.0021071266 36.000004 1 TGCGATC 25 0.0021071266 36.000004 19 TACGAAT 100 0.0 36.000004 12 CGAATTC 25 0.0021071266 36.000004 13 CATACCG 25 0.0021071266 36.000004 2 >>END_MODULE