##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935884.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 468162 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.953302489309255 33.0 31.0 34.0 30.0 34.0 2 31.99581341501446 33.0 31.0 34.0 30.0 34.0 3 32.0428420076811 33.0 31.0 34.0 30.0 34.0 4 35.74380235901248 37.0 35.0 37.0 35.0 37.0 5 33.61300789043109 37.0 35.0 37.0 32.0 37.0 6 34.60097145859766 37.0 35.0 37.0 30.0 37.0 7 35.68932976192002 37.0 35.0 37.0 32.0 37.0 8 35.68778756071616 37.0 35.0 37.0 33.0 37.0 9 37.565635399712065 39.0 37.0 39.0 35.0 39.0 10 37.13276600834754 39.0 37.0 39.0 34.0 39.0 11 37.150994741136614 39.0 37.0 39.0 34.0 39.0 12 37.075546498861506 39.0 37.0 39.0 34.0 39.0 13 36.99181907117622 39.0 37.0 39.0 33.0 39.0 14 38.0834326579261 40.0 37.0 41.0 33.0 41.0 15 38.154813931929546 40.0 37.0 41.0 33.0 41.0 16 38.22481747771071 40.0 37.0 41.0 34.0 41.0 17 38.170955780264094 40.0 37.0 41.0 34.0 41.0 18 38.16941357906024 40.0 37.0 41.0 34.0 41.0 19 38.08832839914388 40.0 37.0 41.0 34.0 41.0 20 38.05102720853038 40.0 37.0 41.0 34.0 41.0 21 38.04149418363729 40.0 37.0 41.0 34.0 41.0 22 38.09185282017763 40.0 37.0 41.0 34.0 41.0 23 38.07145603444961 40.0 37.0 41.0 34.0 41.0 24 38.022156860232144 40.0 36.0 41.0 34.0 41.0 25 37.883578761198045 40.0 36.0 41.0 33.0 41.0 26 37.90953772412114 40.0 36.0 41.0 34.0 41.0 27 37.89374618187721 40.0 36.0 41.0 34.0 41.0 28 37.82564582345427 40.0 36.0 41.0 33.0 41.0 29 37.853642542538694 40.0 36.0 41.0 33.0 41.0 30 37.711409725693244 40.0 36.0 41.0 33.0 41.0 31 37.70968382739308 40.0 36.0 41.0 33.0 41.0 32 37.62971578214379 40.0 36.0 41.0 33.0 41.0 33 37.514398861932406 40.0 36.0 41.0 33.0 41.0 34 37.403339015127244 40.0 36.0 41.0 33.0 41.0 35 37.36946826098658 40.0 36.0 41.0 33.0 41.0 36 37.25119509913235 40.0 35.0 41.0 33.0 41.0 37 37.139054429876836 40.0 35.0 41.0 32.0 41.0 38 37.06789530119916 39.0 35.0 41.0 32.0 41.0 39 37.01144262028956 39.0 35.0 41.0 32.0 41.0 40 36.90659857058027 39.0 35.0 41.0 31.0 41.0 41 36.85770737479761 39.0 35.0 41.0 31.0 41.0 42 36.850457747531834 39.0 35.0 41.0 31.0 41.0 43 36.79510511318732 39.0 35.0 41.0 31.0 41.0 44 36.635679529735434 39.0 35.0 41.0 31.0 41.0 45 36.64740410370769 39.0 35.0 41.0 31.0 41.0 46 36.59885466996467 39.0 35.0 41.0 31.0 41.0 47 36.51373883399336 39.0 35.0 41.0 31.0 41.0 48 36.48115182351408 39.0 35.0 41.0 31.0 41.0 49 36.39565791328643 39.0 35.0 40.0 31.0 41.0 50 36.26563881733246 39.0 35.0 40.0 31.0 41.0 51 35.03850162977773 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 5.0 10 10.0 11 7.0 12 8.0 13 3.0 14 11.0 15 13.0 16 19.0 17 48.0 18 92.0 19 221.0 20 440.0 21 806.0 22 1203.0 23 1456.0 24 1793.0 25 2403.0 26 3134.0 27 3765.0 28 4342.0 29 5088.0 30 6443.0 31 8624.0 32 11674.0 33 17251.0 34 29339.0 35 39982.0 36 36414.0 37 55059.0 38 95391.0 39 143023.0 40 91.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.13274892024556 18.852234910137945 23.076627321311854 11.938388848304648 2 29.76320162678731 28.52922706242711 24.905908638462755 16.801662672322827 3 30.689163152925698 28.03965294064875 24.798894399801778 16.472289506623774 4 27.727795079481034 24.445811492602985 28.44699057163973 19.379402856276247 5 26.289831297713185 32.78138763932143 22.178861163443422 18.74991989952196 6 24.414412105211444 37.53615201575523 23.48802337652351 14.561412502509816 7 78.06122666940077 5.410306688710318 12.049247909911525 4.479218731977393 8 78.58049136837249 7.999154138951901 8.322119266407782 5.09823522626783 9 72.70795152105468 6.613095466953747 10.012346153681845 10.66660685830973 10 40.42724526979977 26.014712855806323 17.875863483153267 15.682178391240639 11 31.89494234901594 24.36891503368492 23.69115818883207 20.044984428467068 12 26.54294880831849 22.031689885125235 29.867866251425788 21.557495055130488 13 24.549408110867603 24.91445268945365 32.60858420803056 17.92755499164819 14 20.43886517914739 30.22692999431821 28.592666641034516 20.74153818549989 15 18.59740858933446 24.595545986218443 36.530730815401505 20.27631460904559 16 21.20377134410738 24.355244552099485 30.43497763594653 24.0060064678466 17 21.6472075905349 24.383439920369447 28.95707041579624 25.012282073299414 18 21.658314856823065 24.35289493807699 30.771826846262616 23.216963358837326 19 22.381355171927666 26.332124350118118 27.297174909539862 23.989345568414354 20 24.141216074777535 25.96665256898253 29.121970599920537 20.770160756319395 21 23.196671237733945 28.330577876888768 28.386327809604367 20.086423075772917 22 20.759480692580773 24.544281680273066 28.630687667944006 26.065549959202155 23 21.077746591991662 27.48514403133958 28.143890362737682 23.293219013931076 24 21.93514210892811 25.479000858677125 28.31968421187538 24.266172820519394 25 20.147726641632595 28.9643328591385 27.48428962624049 23.40365087298841 26 19.782254860497005 26.27381120210525 29.709801308094207 24.23413262930353 27 22.118412002682835 27.870480731029 27.17072295487459 22.84038431141357 28 18.234927226045684 26.828533712689197 31.049722104741523 23.886816956523596 29 21.44300477185248 24.625877367236125 29.878332713889638 24.05278514702176 30 20.327792516265735 28.870134696963873 28.74517795122201 22.05689483554838 31 22.905532700219155 27.148722023573036 24.92790956976431 25.0178357064435 32 26.174059406786537 27.729503889679215 24.544281680273066 21.55215502326118 33 23.36904746647528 27.8852192189883 24.584865922479825 24.160867392056595 34 22.387336007621293 26.81251361708127 27.506931361366366 23.293219013931076 35 23.33807528163328 27.08058321692064 26.0226161029729 23.55872539847318 36 24.513736697980615 27.136119548361464 26.957976085201274 21.392167668456647 37 23.363921035880743 28.72723544414113 26.980404219052378 20.928439300925746 38 23.297063836876976 27.554991648190157 24.17539227874112 24.972552236191746 39 24.844177870053528 27.30422375160735 26.384670263712135 21.466928114626988 40 23.497849035163043 26.61813645703838 27.80554594349819 22.07846856430039 41 22.580858762565096 27.23117211563519 25.566790982608584 24.621178139191137 42 24.487890943733152 24.263823206496895 27.973863748018847 23.274422101751103 43 25.55141169082497 24.162362600980003 26.85672908095916 23.42949662723587 44 22.430269863850548 25.334606396930976 27.955707639663192 24.27941609955528 45 21.49256026759968 25.223320132774553 27.14295478915418 26.14116481047159 46 26.04290822407628 26.23173175097509 26.625398900380638 21.099961124567994 47 20.909428787471004 25.402745203583375 30.9546695374678 22.733156471477823 48 22.42706584472896 25.343577650471417 27.598566308243726 24.630790196555893 49 22.42065780648579 22.28523459828008 31.873582221538697 23.42052537369543 50 22.937572891435014 23.150106159833562 29.273200302459408 24.639120646272016 51 21.541474959522557 23.394466018173198 27.15961568858643 27.904443333717815 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 159.0 1 327.5 2 496.0 3 1085.5 4 1675.0 5 1168.0 6 661.0 7 668.5 8 676.0 9 705.5 10 735.0 11 740.0 12 745.0 13 777.5 14 810.0 15 870.0 16 930.0 17 961.0 18 992.0 19 867.5 20 743.0 21 922.0 22 1101.0 23 1357.5 24 1614.0 25 2016.5 26 2733.5 27 3048.0 28 3602.0 29 4156.0 30 5208.5 31 6261.0 32 7442.5 33 8624.0 34 9939.5 35 11255.0 36 11779.0 37 12303.0 38 13786.0 39 15269.0 40 17977.5 41 20686.0 42 23713.5 43 26741.0 44 30047.0 45 33353.0 46 45359.0 47 57365.0 48 53868.5 49 50372.0 50 49463.0 51 48554.0 52 42224.5 53 35895.0 54 32154.5 55 28414.0 56 24986.5 57 21559.0 58 20231.0 59 18903.0 60 17024.0 61 15145.0 62 13364.0 63 11583.0 64 10238.5 65 8894.0 66 7252.5 67 5611.0 68 4693.5 69 3776.0 70 3199.0 71 2622.0 72 2193.0 73 1764.0 74 1430.5 75 838.0 76 579.0 77 440.5 78 302.0 79 230.5 80 159.0 81 101.5 82 44.0 83 47.0 84 50.0 85 26.5 86 3.0 87 4.5 88 6.0 89 5.0 90 4.0 91 2.5 92 1.0 93 2.0 94 3.0 95 3.5 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 468162.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.62530884730656 #Duplication Level Percentage of deduplicated Percentage of total 1 72.8109411995175 23.026685028978182 2 10.766570530103921 6.809922364816913 3 3.82815227977421 3.631994944871403 4 1.829854900686455 2.3147890551986645 5 1.1758653739031377 1.8593552806270168 6 0.8022641912677162 1.5223111695585687 7 0.6076088310114347 1.3451071857361265 8 0.5342511368386657 1.3516685763637954 9 0.48852955216912186 1.3904908171546357 >10 7.011488182741611 47.88762000127389 >50 0.10038556645053846 2.056063158299646 >100 0.0359488852829631 1.8537817229030296 >500 0.004069685126373181 0.9968206047593587 >1k 0.0033914042719776507 2.8194986074794515 >5k 6.782808543955301E-4 1.133891481979335 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGC 5286 1.129096338446948 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCG 4414 0.9428360268454082 No Hit GAATCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTC 4133 0.8828140686343615 No Hit GCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 2447 0.522682319368082 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 1130 0.24136944049282086 Illumina Single End Adapter 1 (95% over 21bp) GAATGACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCT 1020 0.217873300267856 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 862 0.18412429885381554 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACGAAGGT 847 0.18092027973222943 No Hit CTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGCT 792 0.169172209619747 Illumina Single End Adapter 1 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCT 734 0.15678333568294736 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTC 733 0.15656973440817495 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACGAAGGTCGTA 679 0.14503526557046492 No Hit TCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGCCGTCTTCTGC 475 0.10146060551689373 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1360127477240785E-4 0.0 0.0 0.179638672083595 0.0 2 2.1360127477240785E-4 0.0 0.0 1.1636997449600779 0.0 3 2.1360127477240785E-4 0.0 0.0 1.500548955276165 0.0 4 2.1360127477240785E-4 0.0 0.0 2.1005549361118585 0.0 5 2.1360127477240785E-4 0.0 0.0 4.208585916840752 0.0 6 2.1360127477240785E-4 0.0 0.0 5.0698262567231005 0.0 7 2.1360127477240785E-4 0.0 0.0 6.0669170073607 0.0 8 2.1360127477240785E-4 0.0 0.0 7.491210307543115 0.0 9 2.1360127477240785E-4 0.0 0.0 7.954938675074013 0.0 10 2.1360127477240785E-4 0.0 0.0 9.99504445042528 0.0 11 2.1360127477240785E-4 0.0 0.0 11.383879938995475 0.0 12 2.1360127477240785E-4 0.0 0.0 13.716619460784942 0.0 13 2.1360127477240785E-4 0.0 0.0 14.205125576189438 0.0 14 2.1360127477240785E-4 0.0 0.0 14.433038136371598 0.0 15 4.272025495448157E-4 0.0 0.0 14.913854605884287 0.0 16 4.272025495448157E-4 0.0 0.0 15.696916879199936 0.0 17 4.272025495448157E-4 0.0 0.0 16.57994454910907 0.0 18 4.272025495448157E-4 0.0 0.0 17.514236524963582 0.0 19 4.272025495448157E-4 0.0 0.0 18.297085197004456 0.0 20 4.272025495448157E-4 0.0 0.0 18.880003075858358 0.0 21 4.272025495448157E-4 0.0 0.0 19.515894070855815 0.0 22 4.272025495448157E-4 0.0 0.0 20.20219496669956 0.0 23 4.272025495448157E-4 0.0 0.0 20.854319658579723 0.0 24 4.272025495448157E-4 0.0 0.0 21.39259487100619 0.0 25 4.272025495448157E-4 0.0 0.0 21.863158479329805 0.0 26 4.272025495448157E-4 0.0 0.0 22.308730738505048 0.0 27 6.408038243172235E-4 0.0 0.0 22.779507948103433 0.0 28 6.408038243172235E-4 0.0 0.0 23.21824496648596 0.0 29 6.408038243172235E-4 0.0 0.0 23.679837321269133 0.0 30 6.408038243172235E-4 0.0 0.0 24.24096787009625 0.0 31 6.408038243172235E-4 0.0 0.0 24.706405047825324 0.0 32 6.408038243172235E-4 0.0 0.0 25.185512707139836 0.0 33 6.408038243172235E-4 0.0 0.0 25.64710506192301 0.0 34 6.408038243172235E-4 0.0 0.0 26.077511630589413 0.0 35 8.544050990896314E-4 0.0 0.0 26.567512954917316 0.0 36 8.544050990896314E-4 0.0 0.0 27.021415663808682 0.0 37 8.544050990896314E-4 0.0 0.0 27.467628726808243 0.0 38 8.544050990896314E-4 0.0 0.0 27.906152143915996 0.0 39 8.544050990896314E-4 0.0 0.0 28.367530897424395 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTTACG 20 7.028997E-4 45.000004 1 GCGAACC 20 7.028997E-4 45.000004 33 TAGCGCG 30 2.1627347E-6 45.000004 1 GTTAGCG 35 1.2098644E-7 45.000004 1 CCTCATG 20 7.028997E-4 45.000004 34 ATAACGG 30 2.1627347E-6 45.000004 2 GCGTCGC 20 7.028997E-4 45.000004 3 TCGACAA 35 1.2098644E-7 45.000004 19 GCATCCG 20 7.028997E-4 45.000004 1 TCGTTCA 25 3.887251E-5 45.0 16 GTTACGT 25 3.887251E-5 45.0 23 CGCACGG 25 3.887251E-5 45.0 2 TAGTCGT 25 3.887251E-5 45.0 15 TTACGGG 125 0.0 44.999996 3 TACGGGC 70 0.0 41.785717 4 GGCGTGT 65 0.0 41.53846 8 CGGCGAA 60 3.6379788E-12 41.250004 31 TACGGCT 640 0.0 41.132816 7 CGGGAAC 105 0.0 40.714287 6 ATGGTTA 45 1.924127E-8 40.000004 5 >>END_MODULE