##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935883.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 629468 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.858451899063972 33.0 31.0 34.0 30.0 34.0 2 31.910060559075283 33.0 31.0 34.0 30.0 34.0 3 31.958458571365025 33.0 31.0 34.0 30.0 34.0 4 35.66399245076795 37.0 35.0 37.0 33.0 37.0 5 33.6004435491558 37.0 35.0 37.0 32.0 37.0 6 34.55794099144039 37.0 35.0 37.0 30.0 37.0 7 35.642633144178895 37.0 35.0 37.0 32.0 37.0 8 35.61014062668794 37.0 35.0 37.0 33.0 37.0 9 37.501461551659496 39.0 37.0 39.0 35.0 39.0 10 37.05601079006399 39.0 37.0 39.0 33.0 39.0 11 37.023653307237225 39.0 37.0 39.0 33.0 39.0 12 37.00948419935565 39.0 37.0 39.0 33.0 39.0 13 36.93817954208951 39.0 37.0 39.0 33.0 39.0 14 38.04859341539205 40.0 37.0 41.0 33.0 41.0 15 38.0874786327502 40.0 37.0 41.0 33.0 41.0 16 38.18424606175373 40.0 37.0 41.0 34.0 41.0 17 38.08142431386504 40.0 37.0 41.0 33.0 41.0 18 38.10336982976101 40.0 37.0 41.0 33.0 41.0 19 38.02439202628251 40.0 37.0 41.0 34.0 41.0 20 37.96683866376051 40.0 37.0 41.0 33.0 41.0 21 38.01093939644271 40.0 37.0 41.0 34.0 41.0 22 38.08016134259406 40.0 37.0 41.0 34.0 41.0 23 38.06026199902139 40.0 37.0 41.0 34.0 41.0 24 38.003155045212786 40.0 37.0 41.0 33.0 41.0 25 37.87429067085221 40.0 36.0 41.0 33.0 41.0 26 37.89059968100047 40.0 36.0 41.0 33.0 41.0 27 37.84489918470835 40.0 36.0 41.0 33.0 41.0 28 37.76508734359808 40.0 36.0 41.0 33.0 41.0 29 37.79291401628041 40.0 36.0 41.0 33.0 41.0 30 37.665479420717176 40.0 36.0 41.0 33.0 41.0 31 37.66231166635953 40.0 36.0 41.0 33.0 41.0 32 37.566718244612915 40.0 36.0 41.0 33.0 41.0 33 37.48081395718289 40.0 36.0 41.0 33.0 41.0 34 37.41475023353054 40.0 36.0 41.0 33.0 41.0 35 37.32015765694205 40.0 36.0 41.0 33.0 41.0 36 37.229414362604615 40.0 36.0 41.0 32.0 41.0 37 37.16455006449891 40.0 36.0 41.0 32.0 41.0 38 37.09134856736164 39.0 35.0 41.0 32.0 41.0 39 37.05789968671958 39.0 35.0 41.0 32.0 41.0 40 36.957530803789865 39.0 35.0 41.0 31.0 41.0 41 36.850572229247554 39.0 35.0 41.0 31.0 41.0 42 36.891441661847786 39.0 35.0 41.0 31.0 41.0 43 36.80254595944512 39.0 35.0 41.0 31.0 41.0 44 36.691625308991085 39.0 35.0 41.0 31.0 41.0 45 36.69605126869039 39.0 35.0 41.0 31.0 41.0 46 36.59971118468294 39.0 35.0 41.0 31.0 41.0 47 36.45388010192734 39.0 35.0 41.0 31.0 41.0 48 36.384500880108284 39.0 35.0 41.0 30.0 41.0 49 36.35776083931193 39.0 35.0 40.0 30.0 41.0 50 36.20305718479732 39.0 35.0 40.0 30.0 41.0 51 34.951697306296744 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 7.0 10 8.0 11 5.0 12 11.0 13 11.0 14 15.0 15 11.0 16 37.0 17 47.0 18 110.0 19 301.0 20 712.0 21 1225.0 22 1929.0 23 2338.0 24 2801.0 25 3685.0 26 4363.0 27 5039.0 28 5969.0 29 7271.0 30 9207.0 31 12149.0 32 16383.0 33 23069.0 34 38238.0 35 50299.0 36 48637.0 37 72898.0 38 126918.0 39 195675.0 40 91.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.618573144305984 18.430643019184455 22.935876009582696 12.014907826926866 2 29.28743002027109 29.50507412608743 24.580280490827175 16.62721536281431 3 29.269478353149008 29.5551163839941 25.62179491252931 15.55361035032758 4 26.437404284252736 24.662889932450895 31.492943247313605 17.406762535982768 5 27.251742741489636 32.004962921069854 22.820540519931114 17.92275381750939 6 23.84823374659236 37.93838606569357 23.919087229215783 14.294292958498286 7 76.74290035394968 4.987703902342931 13.743986985835658 4.525408757871727 8 77.17977720869051 9.165835276773402 8.393278133280802 5.261109381255282 9 72.15537565054936 6.114369594641825 9.759987799220928 11.970266955587894 10 39.53386033920708 28.182687602864643 17.50494068006634 14.77851137786194 11 29.0286400579537 24.15500073077583 26.746077640165982 20.070281571104488 12 24.15690710250561 20.857136502570427 31.021116244193507 23.964840150730456 13 22.952239033596626 23.53161717513837 34.74171840347722 18.774425387787783 14 20.002287646075732 29.77911506224304 28.801940686420913 21.416656605260314 15 17.45013249283522 25.178722349666703 37.094816575266734 20.276328582231347 16 19.862010459626227 25.31725202869725 29.41642784065274 25.404309671023782 17 20.082355258726416 26.091556679608814 30.60822790038572 23.21786016127905 18 20.591356510577185 25.063863452947565 31.028106273869362 23.316673762605884 19 20.517325741737466 27.0372759218896 28.573176078847535 23.8722222575254 20 22.337434150743167 26.91844541740009 31.098324299249526 19.645796132607217 21 21.40347086746268 29.835670756893123 29.05183424733267 19.709024128311526 22 20.223585631040816 23.803434010942574 30.483837145017695 25.489143212998915 23 19.848824721828592 28.145354489823156 28.996231738547472 23.009589049800784 24 20.520026435021318 25.60400210971805 29.040554881264814 24.83541657399582 25 18.704048498096807 31.234153284996218 27.420297775264192 22.641500441642783 26 20.12508975833561 26.119516798312226 29.56528369988625 24.19010974346591 27 21.52230137195219 28.539337980643975 27.120838549378206 22.817522098025634 28 17.934986369442132 26.452496393780145 32.92828229552575 22.684234941251976 29 22.101361784872307 24.08414724815241 30.128775410346513 23.68571555662877 30 20.064880184536786 29.89206758723239 29.546378846899284 20.496673381331536 31 22.35427376768954 25.451174642714165 27.524989356091172 24.66956223350512 32 22.895842203257356 28.231617810595615 27.502112895333834 21.370427090813195 33 21.09289113981966 27.535474400604954 26.23405796640973 25.13757649316566 34 22.57938449611418 24.367878907267723 28.127085094079447 24.925651502538653 35 20.345275693124986 26.30093984126278 27.19534591115037 26.15843855446186 36 24.917867151308723 26.193229838530314 27.19232748924489 21.696575520916074 37 19.38716503460065 27.234108802989194 31.629884283236002 21.74884187917416 38 19.26404519371914 27.841923656166795 28.471661784236847 24.422369365877216 39 21.72199381064645 25.055284780163568 29.426595156544895 23.79612625264509 40 20.136686853025093 26.23437569503136 28.126767365457816 25.50217008648573 41 21.54883171185827 25.203346317843007 25.27404093615561 27.97378103414312 42 21.392509230016458 23.72400185553515 29.499672739519724 25.38381617492867 43 24.831762694847075 24.172475804965462 27.609822898066305 23.385938602121158 44 21.223001010377015 25.07641373350194 29.31348376724472 24.38710148887632 45 19.98147642135899 23.664268874668767 28.345364657139044 28.0088900468332 46 24.737556158533874 25.64927843830028 27.284786518139125 22.32837888502672 47 19.17825846587912 24.429677124174702 33.152598702396304 23.23946570754987 48 21.111795992806623 25.18809534400478 27.93835429283141 25.761754370357192 49 20.567050271022513 22.06418753614163 33.20184663874891 24.16691555408694 50 21.395368787611126 22.592411369600995 30.41917937051605 25.593040472271824 51 20.528128514872876 22.320276805175162 27.63810074539135 29.513493934560614 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 168.0 1 396.0 2 624.0 3 1487.0 4 2350.0 5 1623.0 6 896.0 7 905.0 8 914.0 9 946.5 10 979.0 11 1005.5 12 1032.0 13 1019.5 14 1007.0 15 1035.5 16 1064.0 17 1150.5 18 1237.0 19 1238.5 20 1240.0 21 1308.0 22 1376.0 23 1768.5 24 2161.0 25 2661.5 26 4056.5 27 4951.0 28 5927.0 29 6903.0 30 8407.5 31 9912.0 32 11385.5 33 12859.0 34 14400.5 35 15942.0 36 17402.0 37 18862.0 38 21592.0 39 24322.0 40 26382.5 41 28443.0 42 32762.0 43 37081.0 44 42609.0 45 48137.0 46 69747.5 47 91358.0 48 80243.5 49 69129.0 50 67381.5 51 65634.0 52 55540.0 53 45446.0 54 39856.0 55 34266.0 56 29898.5 57 25531.0 58 23439.5 59 21348.0 60 18490.5 61 15633.0 62 14030.0 63 12427.0 64 10551.5 65 8676.0 66 7012.0 67 5348.0 68 4344.5 69 3341.0 70 2844.5 71 2348.0 72 1955.0 73 1562.0 74 1206.5 75 706.5 76 562.0 77 374.0 78 186.0 79 153.0 80 120.0 81 81.0 82 42.0 83 29.5 84 17.0 85 13.0 86 9.0 87 6.5 88 4.0 89 2.5 90 1.0 91 3.0 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 629468.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.80252814629719 #Duplication Level Percentage of deduplicated Percentage of total 1 71.92796323647795 22.874910753339194 2 11.43502233540078 7.273252393502407 3 4.090505935179543 3.902652904084294 4 1.9897753486206113 2.531195461172612 5 1.2229446544888727 1.944636589787303 6 0.848969155581182 1.6199619279425221 7 0.6955579523769693 1.5484350950494585 8 0.5575870942992094 1.4186143408370138 9 0.4785483864028728 1.3697143675148218 >10 6.620150464215062 44.58102708835794 >50 0.09233011471731012 1.9106897785661376 >100 0.03311841071374471 1.9095726960896797 >500 0.0015053823051702144 0.26841895995510956 >1k 0.004516146915510643 2.4622093538331664 >5k 0.0010035882034468094 2.6947220914399406 >10k+ 5.017941017234047E-4 1.6899861985283058 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGC 10590 1.682373051529228 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCG 8992 1.4285078828471025 No Hit GAATCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTC 7894 1.2540748695724009 No Hit GCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTGC 3595 0.5711171973793744 No Hit GAATGACTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCT 1964 0.3120095064403592 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGATTACCGT 1657 0.2632381630202012 No Hit GAACTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCT 1534 0.24369785278997502 No Hit CCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTGC 1495 0.23750214466819597 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTC 1420 0.22558732135708248 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGATTACCGTCGTA 1387 0.22034479910019253 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1231 0.19556196661307643 No Hit CTGTCTCTTATACACATCTGACGCGATTACCGTCGTATGCCGTCTTCTGCT 1146 0.18205850019381445 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.19730947403203974 0.0 2 0.0 0.0 0.0 1.2378707098692865 0.0 3 0.0 0.0 0.0 1.5873721936619494 0.0 4 0.0 0.0 0.0 2.277478759841644 0.0 5 0.0 0.0 0.0 4.707943850997985 0.0 6 0.0 0.0 0.0 5.587416675668978 0.0 7 0.0 0.0 0.0 6.682786098737346 0.0 8 1.5886431081484683E-4 0.0 0.0 8.171503555383277 0.0 9 1.5886431081484683E-4 0.0 0.0 8.62823844897596 0.0 10 1.5886431081484683E-4 0.0 0.0 11.166890135797212 0.0 11 1.5886431081484683E-4 0.0 0.0 12.620021986820618 0.0 12 1.5886431081484683E-4 0.0 0.0 15.664497639276341 0.0 13 1.5886431081484683E-4 0.0 0.0 16.229736857155565 0.0 14 1.5886431081484683E-4 0.0 0.0 16.46580922302643 0.0 15 1.5886431081484683E-4 0.0 0.0 17.037720741959877 0.0 16 1.5886431081484683E-4 0.0 0.0 17.81329630735796 0.0 17 1.5886431081484683E-4 0.0 0.0 18.777761538314895 0.0 18 3.1772862162969366E-4 0.0 0.0 19.757160014488424 0.0 19 3.1772862162969366E-4 0.0 0.0 20.673965952200906 0.0 20 3.1772862162969366E-4 0.0 0.0 21.31752527531185 0.0 21 3.1772862162969366E-4 0.0 0.0 22.004136826653617 0.0 22 3.1772862162969366E-4 0.0 0.0 22.84294038775601 0.0 23 3.1772862162969366E-4 0.0 0.0 23.622805289546093 0.0 24 3.1772862162969366E-4 0.0 0.0 24.259692311602812 0.0 25 3.1772862162969366E-4 0.0 0.0 24.793635260251513 0.0 26 3.1772862162969366E-4 0.0 0.0 25.273882071844795 0.0 27 3.1772862162969366E-4 0.0 0.0 25.83483195333202 0.0 28 3.1772862162969366E-4 0.0 0.0 26.343356612250346 0.0 29 3.1772862162969366E-4 0.0 0.0 26.887149148169566 0.0 30 3.1772862162969366E-4 0.0 0.0 27.492739900995762 0.0 31 3.1772862162969366E-4 0.0 0.0 28.033355150698686 0.0 32 3.1772862162969366E-4 0.0 0.0 28.553476904306493 0.0 33 4.765929324445405E-4 0.0 0.0 29.043414438859482 0.0 34 4.765929324445405E-4 0.0 0.0 29.560200041940178 0.0 35 4.765929324445405E-4 0.0 0.0 30.08302248883184 0.0 36 6.354572432593873E-4 0.0 0.0 30.581379831858012 0.0 37 6.354572432593873E-4 0.0 0.0 31.07227055227589 0.0 38 7.943215540742342E-4 0.0 0.0 31.550928720761025 0.0 39 9.53185864889081E-4 0.0 0.0 32.05405199311164 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 120 0.0 45.000004 4 TCTAGCG 30 2.1639316E-6 45.000004 1 CGAATAT 30 2.1639316E-6 45.000004 14 TAGTACG 30 2.1639316E-6 45.000004 1 ACGTTAG 25 3.8887883E-5 45.0 1 TAGGACG 20 7.030853E-4 45.0 1 TCGACGG 55 1.8189894E-12 45.0 2 ATCGACG 25 3.8887883E-5 45.0 1 ACGGTAG 20 7.030853E-4 45.0 1 TCACGTA 25 3.8887883E-5 45.0 13 CGTATGG 95 0.0 42.63158 2 TACGGCT 1245 0.0 42.108433 7 CGACGGT 60 3.6379788E-12 41.250004 28 GCGATAA 60 3.6379788E-12 41.250004 9 CCGATGA 410 0.0 40.60976 18 ACGGCTG 1300 0.0 40.326923 8 CGTTAGG 140 0.0 40.178574 2 GCGTATG 90 0.0 40.0 1 GCGTTAG 85 0.0 39.705883 1 ATAGCGG 80 0.0 39.375 2 >>END_MODULE