##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935882.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 638733 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.980786964193175 33.0 31.0 34.0 30.0 34.0 2 32.018829463954425 33.0 31.0 34.0 30.0 34.0 3 32.06145290755292 33.0 31.0 34.0 30.0 34.0 4 35.74170897699039 37.0 35.0 37.0 33.0 37.0 5 33.73536829943028 37.0 35.0 37.0 32.0 37.0 6 34.67386059589844 37.0 35.0 37.0 31.0 37.0 7 35.741442825092804 37.0 35.0 37.0 33.0 37.0 8 35.76335495426101 37.0 35.0 37.0 35.0 37.0 9 37.631575321769816 39.0 37.0 39.0 35.0 39.0 10 37.23155841329632 39.0 37.0 39.0 34.0 39.0 11 37.20607045510409 39.0 37.0 39.0 34.0 39.0 12 37.08971041107944 39.0 37.0 39.0 34.0 39.0 13 36.99952405778314 39.0 37.0 39.0 33.0 39.0 14 37.911398033294034 40.0 37.0 41.0 33.0 41.0 15 38.054899308474745 40.0 37.0 41.0 33.0 41.0 16 38.102232075061096 40.0 37.0 41.0 33.0 41.0 17 38.13081052646411 40.0 37.0 41.0 33.0 41.0 18 38.10756294100978 40.0 37.0 41.0 34.0 41.0 19 38.03677123305043 40.0 37.0 41.0 34.0 41.0 20 38.098407315732864 40.0 37.0 41.0 34.0 41.0 21 37.9878869574611 40.0 36.0 41.0 33.0 41.0 22 38.0970358506606 40.0 36.0 41.0 34.0 41.0 23 38.114193254458435 40.0 36.0 41.0 34.0 41.0 24 38.07385245478157 40.0 36.0 41.0 34.0 41.0 25 37.8835413232133 40.0 36.0 41.0 34.0 41.0 26 37.94913210997397 40.0 36.0 41.0 34.0 41.0 27 37.92875270261596 40.0 36.0 41.0 34.0 41.0 28 37.84898384771102 40.0 36.0 41.0 34.0 41.0 29 37.865931461189575 40.0 36.0 41.0 34.0 41.0 30 37.716618681045134 40.0 36.0 41.0 33.0 41.0 31 37.65185296516698 40.0 36.0 41.0 33.0 41.0 32 37.607998960442 40.0 36.0 41.0 33.0 41.0 33 37.54411154582588 40.0 35.0 41.0 33.0 41.0 34 37.43066508228008 40.0 35.0 41.0 33.0 41.0 35 37.37352853226622 40.0 35.0 41.0 33.0 41.0 36 37.256288621380136 40.0 35.0 41.0 32.0 41.0 37 37.19333273840556 39.0 35.0 41.0 32.0 41.0 38 37.053015892399486 39.0 35.0 41.0 32.0 41.0 39 37.021340685388104 39.0 35.0 41.0 32.0 41.0 40 36.90051242068282 39.0 35.0 41.0 31.0 41.0 41 36.76244690661043 39.0 35.0 41.0 31.0 41.0 42 36.7859856935527 39.0 35.0 41.0 31.0 41.0 43 36.73686657805374 39.0 35.0 41.0 31.0 41.0 44 36.62734507219761 39.0 35.0 41.0 31.0 41.0 45 36.55867944822015 39.0 35.0 41.0 31.0 41.0 46 36.46655018607149 38.0 35.0 40.0 31.0 41.0 47 36.36782035686273 38.0 35.0 40.0 31.0 41.0 48 36.2809264590995 38.0 35.0 40.0 31.0 41.0 49 36.206749925242626 38.0 35.0 40.0 31.0 41.0 50 36.09233435566974 38.0 35.0 40.0 30.0 41.0 51 34.83409343184085 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 8.0 10 8.0 11 13.0 12 3.0 13 17.0 14 22.0 15 31.0 16 46.0 17 83.0 18 158.0 19 251.0 20 453.0 21 762.0 22 1125.0 23 1663.0 24 2290.0 25 3257.0 26 4091.0 27 5223.0 28 6088.0 29 7496.0 30 9200.0 31 12183.0 32 17001.0 33 25062.0 34 43373.0 35 51052.0 36 50748.0 37 77035.0 38 128352.0 39 191522.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.32942559723703 19.371787585736136 22.269085830855772 13.029700986171061 2 31.732821069210456 24.629070362733724 24.86641523140342 18.771693336652405 3 32.9910933050273 24.91729721182403 25.21836197597431 16.873247507174362 4 29.08586216776024 25.1129971365187 25.735322897047748 20.06581779867331 5 24.828684285922286 33.35681732429669 23.249933853425453 18.564564536355565 6 25.1374204871206 34.54056702878981 24.565820147072408 15.756192337017188 7 79.71030148747599 5.678585574880271 9.595089027809742 5.016023909834 8 79.59397745223747 5.603123683918007 8.815577087765938 5.987321776078581 9 73.78857832615506 7.033768413405915 11.468954946746136 7.708698313692889 10 41.44313821268042 25.445373888620125 17.83014185896141 15.281346039738045 11 31.559509215900857 24.328788398282224 24.160329903105055 19.951372482711868 12 28.188930272899633 21.682612296530788 29.64399835298943 20.484459077580148 13 25.835051578672154 24.422098122376642 30.89005891350533 18.852791385445876 14 21.399238805572907 27.084556457862675 30.57646935417459 20.939735382389824 15 19.636217323983573 23.93879758835069 35.31084193238803 21.114143155277716 16 23.765329175101332 25.0270457295928 29.450646827391104 21.75697826791476 17 24.42335060189469 23.97245797539817 27.70265510001832 23.901536322688823 18 25.72201530216851 22.729372053737634 30.16221175358092 21.386400890512938 19 24.77936790489923 25.34799360609206 26.589044248535775 23.283594240472937 20 25.12865313049428 26.9514805090703 27.231096561474043 20.68876979896138 21 24.003926523289074 26.490254926549905 29.071458653302713 20.43435989685831 22 22.797632187471134 23.729163829017757 28.756146934634657 24.71705704887645 23 21.301545403165328 26.42935310998492 29.204221482215576 23.064880004634176 24 22.394177222720604 24.65678147207049 29.08727120721804 23.861770097990867 25 22.67003583657021 26.667793898232905 27.023811201237454 23.63835906395943 26 22.048805995619453 25.15589456001177 27.896945985255183 24.89835345911359 27 22.819237459157428 25.486862272655397 28.111746222600054 23.582154045587124 28 19.576254867057127 26.35827489733582 28.459465848797542 25.60600438680951 29 22.834736893193245 25.502674826570725 28.297739431029868 23.36484884920616 30 25.959829850657474 23.734017187150187 28.072293117781612 22.23385984441073 31 25.684754036506646 26.22864326721807 25.758337208191843 22.32826548808344 32 26.5596109798617 26.508885559380836 25.733131057891168 21.1983724028663 33 27.015200404550882 25.682249077470555 24.325500639547354 22.977049878431206 34 23.948504304615543 25.493750910004646 29.002572279810185 21.55517250556962 35 25.075109631097813 26.90936588527601 26.65965278136561 21.35587170226057 36 26.812298722627453 28.32341526114981 24.982269586822664 19.88201642940008 37 25.04583292236349 28.262356884645072 25.550269048256467 21.14154114473497 38 24.584763899782853 29.512488003594616 24.029289233529504 21.873458863093028 39 26.0983853973413 25.124269452181114 25.326231774466013 23.451113376011573 40 27.072814462380997 24.21371684256176 27.28933685906318 21.42413183599407 41 22.296640380252782 26.676091575039962 26.018070148246608 25.00919789646065 42 23.563679972695947 26.085547482281328 28.09828206778106 22.252490477241665 43 24.044945227505078 24.9655176732688 27.747587802728212 23.24194929649791 44 24.149996947081178 24.34209599316146 27.550948518395007 23.956958541362354 45 24.226867877501242 23.269660405834674 26.427944070527122 26.075527646136965 46 25.228381812118677 24.244402590753882 27.242368877136457 23.28484671999098 47 21.830404879660204 26.104960914811038 29.728071040638266 22.336563164890492 48 22.71825629801498 26.416828314804462 27.44198280032502 23.42293258685554 49 24.606995411228166 23.98748772961472 28.998345161436784 22.40717169772033 50 22.930551576323754 24.819290689536942 28.312456065366902 23.937701668772398 51 22.55699956006657 23.782707328414222 25.907695390718814 27.7525977208004 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 251.0 1 618.0 2 985.0 3 1583.5 4 2182.0 5 1569.0 6 956.0 7 950.5 8 945.0 9 992.5 10 1040.0 11 1096.0 12 1152.0 13 1095.0 14 1038.0 15 1010.0 16 982.0 17 983.0 18 984.0 19 957.5 20 931.0 21 1220.0 22 1509.0 23 1752.0 24 1995.0 25 2711.0 26 3824.5 27 4222.0 28 4997.5 29 5773.0 30 6528.0 31 7283.0 32 8215.0 33 9147.0 34 11314.0 35 13481.0 36 14459.5 37 15438.0 38 17897.5 39 20357.0 40 22148.5 41 23940.0 42 27865.5 43 31791.0 44 36000.5 45 40210.0 46 49868.0 47 59526.0 48 63524.5 49 67523.0 50 68918.5 51 70314.0 52 62671.5 53 55029.0 54 49001.5 55 42974.0 56 38959.5 57 34945.0 58 32293.5 59 29642.0 60 26733.0 61 23824.0 62 21666.0 63 19508.0 64 17328.0 65 15148.0 66 12862.5 67 10577.0 68 8690.0 69 6803.0 70 5651.5 71 4500.0 72 3974.0 73 3448.0 74 2833.5 75 1838.0 76 1457.0 77 1073.0 78 689.0 79 486.5 80 284.0 81 240.5 82 197.0 83 124.0 84 51.0 85 38.0 86 25.0 87 18.0 88 11.0 89 9.0 90 7.0 91 5.5 92 4.0 93 4.5 94 5.0 95 4.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 638733.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.53113046736639 #Duplication Level Percentage of deduplicated Percentage of total 1 71.13688244666162 23.141632039140546 2 11.888131443090346 7.734687099767452 3 4.352735707628696 4.247982395845004 4 2.2211206502911547 2.890222626335329 5 1.2670407297485236 2.060913364345817 6 0.9131992811054106 1.7824442973807184 7 0.667934755406099 1.5210070870262984 8 0.540111627506913 1.4056353457095185 9 0.47154032286308 1.3805765787314632 >10 6.335826958631978 45.88284811037678 >50 0.15254312981361112 3.052893808483841 >100 0.048602069750078025 2.72055386608932 >500 9.624172227738223E-4 0.1878511214285738 >1k 0.0033684602797083778 1.990752259339311 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGC 2277 0.35648698282380903 No Hit CCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGC 2272 0.3557041831250303 No Hit GAATCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTC 2083 0.3261143545111964 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGC 2046 0.3203216367402342 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCG 1837 0.2876006093312855 No Hit CTGTCTCTTATACACATCTGACGCTGAGGGAATCGTATGCCGTCTTCTGCT 1109 0.1736249731891103 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1093 0.17112001415301856 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 687 0.10755667861219007 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.131198795114704E-4 0.0 0.0 0.1823923298154315 0.0 2 3.131198795114704E-4 0.0 0.0 1.094353978892589 0.0 3 3.131198795114704E-4 0.0 0.0 1.449588482198352 0.0 4 3.131198795114704E-4 0.0 0.0 1.971089641524706 0.0 5 3.131198795114704E-4 0.0 0.0 3.5687838267319836 0.0 6 3.131198795114704E-4 0.0 0.0 4.544152251410214 0.0 7 3.131198795114704E-4 0.0 0.0 5.520616595666734 0.0 8 3.131198795114704E-4 0.0 0.0 7.091382471236025 0.0 9 4.6967981926720554E-4 0.0 0.0 7.7090114335724005 0.0 10 4.6967981926720554E-4 0.0 0.0 9.16564511305976 0.0 11 4.6967981926720554E-4 0.0 0.0 10.687877407304773 0.0 12 4.6967981926720554E-4 0.0 0.0 12.265375360283562 0.0 13 4.6967981926720554E-4 0.0 0.0 12.828834583464452 0.0 14 4.6967981926720554E-4 0.0 0.0 13.07416400906169 0.0 15 4.6967981926720554E-4 0.0 0.0 13.499067685558755 0.0 16 4.6967981926720554E-4 0.0 0.0 14.278423065662805 0.0 17 4.6967981926720554E-4 0.0 0.0 15.185531356607534 0.0 18 4.6967981926720554E-4 0.0 0.0 16.18266161291181 0.0 19 4.6967981926720554E-4 0.0 0.0 16.811719450850354 0.0 20 4.6967981926720554E-4 0.0 0.0 17.42058105656041 0.0 21 4.6967981926720554E-4 0.0 0.0 18.147175736966776 0.0 22 7.827996987786759E-4 0.0 0.0 18.924808957733514 0.0 23 7.827996987786759E-4 0.0 0.0 19.622753169164582 0.0 24 7.827996987786759E-4 0.0 0.0 20.226448296862696 0.0 25 7.827996987786759E-4 0.0 0.0 20.750610975164896 0.0 26 7.827996987786759E-4 0.0 0.0 21.275086773346608 0.0 27 7.827996987786759E-4 0.0 0.0 21.853888870623564 0.0 28 7.827996987786759E-4 0.0 0.0 22.366622673323594 0.0 29 7.827996987786759E-4 0.0 0.0 22.926167898010593 0.0 30 7.827996987786759E-4 0.0 0.0 23.62520802901995 0.0 31 7.827996987786759E-4 0.0 0.0 24.17301125822527 0.0 32 7.827996987786759E-4 0.0 0.0 24.6938861777926 0.0 33 7.827996987786759E-4 0.0 0.0 25.22243253440796 0.0 34 7.827996987786759E-4 0.0 0.0 25.782917118733494 0.0 35 9.393596385344111E-4 0.0 0.0 26.37079969251628 0.0 36 9.393596385344111E-4 0.0 0.0 26.87413989883097 0.0 37 0.0010959195782901463 0.0 0.0 27.4183422494219 0.0 38 0.0012524795180458815 0.0 0.0 27.985089231337664 0.0 39 0.0012524795180458815 0.0 0.0 28.867930731620255 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGCA 20 7.0309296E-4 45.0 30 CAACGAT 20 7.0309296E-4 45.0 13 TCCGAAC 25 3.8888516E-5 45.0 17 GCCGATA 40 6.8066583E-9 45.0 9 CTACGCG 20 7.0309296E-4 45.0 1 AACGATT 25 3.8888516E-5 45.0 14 CCGACTC 20 7.0309296E-4 45.0 35 CGCAACA 20 7.0309296E-4 45.0 26 GTCGGTC 20 7.0309296E-4 45.0 31 ACTACGG 30 2.1639808E-6 44.999996 2 ACGGGTC 70 0.0 41.785713 5 CGTTTTT 665 0.0 40.263157 1 TACACGG 45 1.925946E-8 40.000004 2 CGTTAGG 85 0.0 39.705883 2 CTACGGG 125 0.0 39.6 3 AGCGACT 285 0.0 39.473686 19 ACGGGAC 160 0.0 39.375 5 ACAACGA 300 0.0 39.000004 13 CAACGAG 300 0.0 39.000004 14 CACACCG 75 0.0 39.000004 17 >>END_MODULE