##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935881.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 693606 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.879445967883782 33.0 31.0 34.0 30.0 34.0 2 31.932895620856797 33.0 31.0 34.0 30.0 34.0 3 31.9636407412854 33.0 31.0 34.0 30.0 34.0 4 35.67192181151835 37.0 35.0 37.0 33.0 37.0 5 33.608718782709495 37.0 35.0 37.0 32.0 37.0 6 34.58913850226209 37.0 35.0 37.0 30.0 37.0 7 35.699361020521735 37.0 35.0 37.0 32.0 37.0 8 35.72402776215892 37.0 35.0 37.0 35.0 37.0 9 37.60319835756899 39.0 37.0 39.0 35.0 39.0 10 36.908756556315836 39.0 37.0 39.0 32.0 39.0 11 37.03702390117733 39.0 37.0 39.0 34.0 39.0 12 37.09569698070663 39.0 37.0 39.0 34.0 39.0 13 37.14318936110703 39.0 37.0 39.0 33.0 39.0 14 38.23045648394045 40.0 38.0 41.0 33.0 41.0 15 38.33549161916131 40.0 38.0 41.0 34.0 41.0 16 38.299335645885414 40.0 37.0 41.0 34.0 41.0 17 38.294285228213134 40.0 37.0 41.0 34.0 41.0 18 38.25829217163635 40.0 37.0 41.0 34.0 41.0 19 38.161979567650796 40.0 37.0 41.0 34.0 41.0 20 38.25095371147309 40.0 37.0 41.0 34.0 41.0 21 38.157987387652355 40.0 37.0 41.0 34.0 41.0 22 38.218885073081836 40.0 37.0 41.0 34.0 41.0 23 38.231488770281686 40.0 37.0 41.0 34.0 41.0 24 38.186124399154565 40.0 37.0 41.0 34.0 41.0 25 37.996404298694074 40.0 37.0 41.0 34.0 41.0 26 38.074969074661986 40.0 37.0 41.0 34.0 41.0 27 38.076888031533755 40.0 37.0 41.0 34.0 41.0 28 37.98569072355199 40.0 37.0 41.0 34.0 41.0 29 37.99088819877567 40.0 37.0 41.0 34.0 41.0 30 37.84748690178574 40.0 37.0 41.0 33.0 41.0 31 37.82296577595926 40.0 37.0 41.0 33.0 41.0 32 37.76989241730896 40.0 37.0 41.0 33.0 41.0 33 37.701209332099204 40.0 37.0 41.0 33.0 41.0 34 37.652726475837866 40.0 37.0 41.0 33.0 41.0 35 37.59985784436697 40.0 37.0 41.0 33.0 41.0 36 37.51039495044737 40.0 36.0 41.0 33.0 41.0 37 37.486219842388905 40.0 36.0 41.0 33.0 41.0 38 37.367721732510965 40.0 36.0 41.0 33.0 41.0 39 37.31604253711762 40.0 36.0 41.0 32.0 41.0 40 37.294518790206546 40.0 36.0 41.0 32.0 41.0 41 37.223350144029894 40.0 36.0 41.0 32.0 41.0 42 37.23071743900716 40.0 36.0 41.0 32.0 41.0 43 37.152938411720775 39.0 36.0 41.0 32.0 41.0 44 37.01365328442949 39.0 35.0 41.0 32.0 41.0 45 36.94587417063866 39.0 35.0 41.0 31.0 41.0 46 36.87054610254236 39.0 35.0 41.0 31.0 41.0 47 36.79709373909684 39.0 35.0 41.0 31.0 41.0 48 36.714391167319775 39.0 35.0 41.0 31.0 41.0 49 36.614394915845594 39.0 35.0 41.0 31.0 41.0 50 36.50412337840215 39.0 35.0 41.0 31.0 41.0 51 35.330387857083124 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 10.0 10 13.0 11 11.0 12 15.0 13 9.0 14 17.0 15 10.0 16 42.0 17 58.0 18 120.0 19 221.0 20 428.0 21 732.0 22 1114.0 23 1595.0 24 2412.0 25 3303.0 26 4558.0 27 5463.0 28 6327.0 29 7715.0 30 9663.0 31 12477.0 32 16589.0 33 23694.0 34 38485.0 35 50847.0 36 54523.0 37 84407.0 38 148218.0 39 220416.0 40 110.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.75077493562628 20.929173046369264 23.226442677831507 12.09360934017295 2 31.82714682398941 25.219937543792874 24.89078814197109 18.062127490246624 3 31.850935545540267 24.858493150289934 26.32993370876261 16.960637595407192 4 28.170748234588512 26.32878031620257 26.447579749886824 19.052891699322096 5 23.92597526549655 34.47692205661427 23.31539807902469 18.281704598864483 6 24.378105149032734 36.398185713503054 24.719941869014974 14.503767268449236 7 80.23993448730259 6.032387263085959 9.164280585808081 4.56339766380337 8 81.68527953910434 5.197619397756075 8.076919749829154 5.0401813133104385 9 75.92912979414827 6.921364578737784 10.352419096720617 6.797086530393336 10 36.93696421311235 24.87737995346061 21.580551494652582 16.605104338774463 11 29.443805272734085 26.33209631981269 23.882290522284986 20.341807885168237 12 24.302125414140015 23.55285277232319 30.22090351006191 21.92411830347488 13 24.21360253515685 25.006559920185232 32.374143245588996 18.405694299068923 14 22.16258221526342 28.203187400339676 29.451590672514367 20.182639711882537 15 20.750685547702872 26.59074460140195 33.419981949406434 19.238587901488742 16 22.867737591658667 26.072727167873406 30.425630689469234 20.633904550998693 17 23.29665544992402 26.02341963593164 28.25177406193141 22.428150852212926 18 23.28295891327353 25.349117510517498 30.55639657096392 20.811527005245054 19 22.761769650204872 28.13268628010715 28.211982018609987 20.89356205107799 20 23.378690495756956 27.515477086415054 28.635277088145145 20.470555329682846 21 22.79997577875624 28.651280409915714 29.39247930381225 19.156264507515793 22 21.39975721086611 26.556286998670714 28.27239095394215 23.771564836521023 23 20.43465598625156 27.986349599051913 28.76186192160968 22.817132493086852 24 21.338050708903904 26.059751501572936 29.776559026306 22.825638763217157 25 20.443450604521875 28.30281168271324 28.045749315894035 23.207988396870846 26 19.8911197423321 27.78652433802476 29.150699388413592 23.171656531229544 27 22.159266211653303 27.32213965853813 28.11682713240658 22.401766997401985 28 20.225315236604064 26.778603414618672 29.88829393056 23.10778741821726 29 21.23684051176028 26.208394967748262 28.02657416458335 24.52819035590811 30 23.12523248068788 27.224245465004625 27.18776942529332 22.462752629014165 31 23.379123017966972 27.314065910617845 25.543031634674442 23.76377943674074 32 22.633166379760265 29.04646153579986 25.680717871529367 22.6396542129105 33 22.512492683165945 28.45001340818851 25.942970504868757 23.094523403776783 34 21.202527083099053 27.410085841241283 26.415717280415684 24.971669795243987 35 20.63736472867882 28.76344783637973 25.990259599830452 24.608927835111 36 22.445740088753556 29.889014800910026 25.30615363765596 22.359091472680458 37 22.13576583824246 29.493977849095888 26.582526679411657 21.78772963325 38 20.67095728699002 31.744967604086472 25.290438664025398 22.293636444898112 39 20.811527005245054 29.88382453438984 26.270533991920487 23.03411446844462 40 20.62424488830835 28.211837844539982 27.250485145745568 23.9134321214061 41 20.075806726008715 28.46789099286915 25.258576194554255 26.19772608656788 42 21.460166146198272 27.935167804200077 26.704497942636017 23.900168106965623 43 22.525324175396406 27.03696334806792 27.10501350911036 23.332698967425312 44 21.445892913267762 27.300225199897348 26.638033696363646 24.615848190471247 45 21.387502414915673 26.462141330957344 26.27745434728073 25.872901906846252 46 22.898446668569765 27.602125702488156 25.496751758202784 24.002675870739296 47 20.081285340668913 27.35227203916921 28.42233198674752 24.14411063341436 48 21.20339212751908 26.640340481483726 27.65446088990003 24.501806501097164 49 21.66229819234551 25.651306361248317 29.212405890375802 23.473989556030368 50 20.431339982641443 25.444416570790914 28.561027442092485 25.563216004475166 51 20.080852818458894 25.237959302543516 26.48650674878822 28.19468113020937 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 193.0 1 364.0 2 535.0 3 1616.0 4 2697.0 5 1879.0 6 1061.0 7 1075.0 8 1089.0 9 1122.5 10 1156.0 11 1147.0 12 1138.0 13 1137.5 14 1137.0 15 1245.0 16 1353.0 17 1257.0 18 1161.0 19 1357.0 20 1553.0 21 1606.0 22 1659.0 23 1904.5 24 2150.0 25 2686.5 26 4043.5 27 4864.0 28 5888.0 29 6912.0 30 8320.5 31 9729.0 32 11879.0 33 14029.0 34 15547.0 35 17065.0 36 19151.5 37 21238.0 38 23961.5 39 26685.0 40 30346.5 41 34008.0 42 37916.0 43 41824.0 44 46493.0 45 51162.0 46 62283.5 47 73405.0 48 76554.0 49 79703.0 50 79394.0 51 79085.0 52 69564.0 53 60043.0 54 51549.0 55 43055.0 56 37698.0 57 32341.0 58 27983.0 59 23625.0 60 21045.5 61 18466.0 62 16074.5 63 13683.0 64 11264.5 65 8846.0 66 7142.0 67 5438.0 68 4433.0 69 3428.0 70 2531.0 71 1634.0 72 1424.5 73 1215.0 74 1114.0 75 825.0 76 637.0 77 410.0 78 183.0 79 127.5 80 72.0 81 62.5 82 53.0 83 47.5 84 42.0 85 24.5 86 7.0 87 4.0 88 1.0 89 2.5 90 4.0 91 3.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 693606.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.38304594516889 #Duplication Level Percentage of deduplicated Percentage of total 1 72.28444033962383 27.022125543369775 2 11.278041918503723 8.432151184219308 3 4.107236008228664 4.606229772097927 4 2.132799834457516 3.189222168134957 5 1.3309781255927056 2.4878008210523443 6 0.9906132361245235 2.22192840719613 7 0.8213286720226256 2.149263723761445 8 0.671823892955578 2.009185876593648 9 0.5766261168208078 1.9400436556466925 >10 5.70247748488202 40.055206234123105 >50 0.06740130159948651 1.7053623456426061 >100 0.03233704024352545 2.1950222612842496 >500 0.0011688086835009194 0.2631812903019467 >1k 0.0027272202615021453 1.7232767165758902 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 2263 0.32626592042168034 No Hit GAATCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTC 1976 0.284887962330199 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGC 1917 0.2763816921998945 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCG 1598 0.23039016386824798 No Hit CCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC 1567 0.22592076769808797 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1321 0.19045394647681824 No Hit CTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGCT 1190 0.17156714330614212 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4417407000516142E-4 0.0 0.0 0.17920836901641565 0.0 2 1.4417407000516142E-4 0.0 0.0 0.9302110996733015 0.0 3 1.4417407000516142E-4 0.0 0.0 1.3116956889069586 0.0 4 1.4417407000516142E-4 0.0 0.0 1.8651799436567735 0.0 5 1.4417407000516142E-4 0.0 0.0 3.450806365573539 0.0 6 1.4417407000516142E-4 0.0 0.0 4.521875531641883 0.0 7 1.4417407000516142E-4 0.0 0.0 5.516099918397477 0.0 8 1.4417407000516142E-4 0.0 0.0 7.124361669305052 0.0 9 1.4417407000516142E-4 0.0 0.0 7.683324538715063 0.0 10 1.4417407000516142E-4 0.0 0.0 9.196287229349227 0.0 11 1.4417407000516142E-4 0.0 0.0 10.86063269348881 0.0 12 1.4417407000516142E-4 0.0 0.0 12.461397392756117 0.0 13 1.4417407000516142E-4 0.0 0.0 13.064477527587709 0.0 14 1.4417407000516142E-4 0.0 0.0 13.308852576246457 0.0 15 1.4417407000516142E-4 0.0 0.0 13.750025230462251 0.0 16 1.4417407000516142E-4 0.0 0.0 14.668846578605145 0.0 17 1.4417407000516142E-4 0.0 0.0 15.791241713595326 0.0 18 1.4417407000516142E-4 0.0 0.0 16.972459869147613 0.0 19 2.8834814001032285E-4 0.0 0.0 17.72951791074472 0.0 20 2.8834814001032285E-4 0.0 0.0 18.416939876529327 0.0 21 2.8834814001032285E-4 0.0 0.0 19.288760477850538 0.0 22 2.8834814001032285E-4 0.0 0.0 20.183072234092553 0.0 23 2.8834814001032285E-4 0.0 0.0 21.117752729936015 0.0 24 2.8834814001032285E-4 0.0 0.0 21.859672494182576 0.0 25 2.8834814001032285E-4 0.0 0.0 22.535416360296768 0.0 26 2.8834814001032285E-4 0.0 0.0 23.186218112300068 0.0 27 2.8834814001032285E-4 0.0 0.0 23.825918460912966 0.0 28 2.8834814001032285E-4 0.0 0.0 24.486668223746623 0.0 29 2.8834814001032285E-4 0.0 0.0 25.142948590410118 0.0 30 2.8834814001032285E-4 0.0 0.0 25.8743436475463 0.0 31 2.8834814001032285E-4 0.0 0.0 26.597664956762195 0.0 32 2.8834814001032285E-4 0.0 0.0 27.26374916018604 0.0 33 2.8834814001032285E-4 0.0 0.0 27.924354748949693 0.0 34 2.8834814001032285E-4 0.0 0.0 28.52008200621102 0.0 35 2.8834814001032285E-4 0.0 0.0 29.18602203556486 0.0 36 2.8834814001032285E-4 0.0 0.0 29.805249666237028 0.0 37 2.8834814001032285E-4 0.0 0.0 30.440913140889784 0.0 38 2.8834814001032285E-4 0.0 0.0 31.069800434252297 0.0 39 2.8834814001032285E-4 0.0 0.0 31.711519219845272 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 20 7.031349E-4 45.000004 1 AATCCGC 20 7.031349E-4 45.000004 37 TTTCGCG 20 7.031349E-4 45.000004 1 CACGCAG 20 7.031349E-4 45.000004 19 AACGGTT 20 7.031349E-4 45.000004 26 CCCGTCG 20 7.031349E-4 45.000004 18 TCGACAA 20 7.031349E-4 45.000004 19 GTACGCG 20 7.031349E-4 45.000004 1 CCGCTAT 25 3.8892E-5 45.0 42 TCATGCG 25 3.8892E-5 45.0 1 GCGATTT 45 3.8380676E-10 45.0 9 TACACGA 25 3.8892E-5 45.0 37 CCCGCAT 25 3.8892E-5 45.0 23 CGTAAGG 165 0.0 42.272728 2 ATGCGAG 65 0.0 41.53846 1 CGATGCG 60 3.6379788E-12 41.249996 10 CTCGCCT 50 1.0804797E-9 40.5 27 TATCGGG 50 1.0804797E-9 40.5 3 CACTCGC 40 3.4555705E-7 39.375004 25 GCGTAAG 80 0.0 39.375004 1 >>END_MODULE