##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935880.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 678011 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.89377753458277 33.0 31.0 34.0 30.0 34.0 2 31.93625914623804 33.0 31.0 34.0 30.0 34.0 3 31.980869041947695 33.0 31.0 34.0 30.0 34.0 4 35.678878366280195 37.0 35.0 37.0 33.0 37.0 5 33.60873201172252 37.0 35.0 37.0 32.0 37.0 6 34.585869550789 37.0 35.0 37.0 30.0 37.0 7 35.68192403958048 37.0 35.0 37.0 32.0 37.0 8 35.690182017695875 37.0 35.0 37.0 35.0 37.0 9 37.5536650585315 39.0 37.0 39.0 35.0 39.0 10 37.121748762188226 39.0 37.0 39.0 34.0 39.0 11 37.096640025014345 39.0 37.0 39.0 34.0 39.0 12 37.03626932306408 39.0 37.0 39.0 33.0 39.0 13 36.971997504465264 39.0 37.0 39.0 33.0 39.0 14 38.006044149726186 40.0 37.0 41.0 33.0 41.0 15 38.093678421146556 40.0 37.0 41.0 33.0 41.0 16 38.108838942141055 40.0 37.0 41.0 33.0 41.0 17 38.09925945154282 40.0 37.0 41.0 33.0 41.0 18 38.08500009586865 40.0 37.0 41.0 34.0 41.0 19 38.01621212635193 40.0 37.0 41.0 34.0 41.0 20 38.05063192190097 40.0 37.0 41.0 34.0 41.0 21 37.95777649625153 40.0 36.0 41.0 33.0 41.0 22 38.02043772151189 40.0 36.0 41.0 34.0 41.0 23 38.01209567396399 40.0 36.0 41.0 34.0 41.0 24 37.96530439771626 40.0 36.0 41.0 34.0 41.0 25 37.756853502376806 40.0 36.0 41.0 33.0 41.0 26 37.8354156495986 40.0 36.0 41.0 33.0 41.0 27 37.8379038098202 40.0 36.0 41.0 33.0 41.0 28 37.747700258550374 40.0 36.0 41.0 33.0 41.0 29 37.747684034624804 40.0 36.0 41.0 33.0 41.0 30 37.61190010191575 40.0 36.0 41.0 33.0 41.0 31 37.60619812952887 40.0 36.0 41.0 33.0 41.0 32 37.55990684516918 40.0 36.0 41.0 33.0 41.0 33 37.49766449216901 40.0 36.0 41.0 33.0 41.0 34 37.41203018830078 40.0 35.0 41.0 33.0 41.0 35 37.33754909581113 40.0 35.0 41.0 33.0 41.0 36 37.24772164463408 40.0 35.0 41.0 32.0 41.0 37 37.21545963118592 40.0 35.0 41.0 32.0 41.0 38 37.13072796754035 39.0 35.0 41.0 32.0 41.0 39 37.0792936987748 39.0 35.0 41.0 32.0 41.0 40 36.98314039152757 39.0 35.0 41.0 32.0 41.0 41 36.89347517960623 39.0 35.0 41.0 31.0 41.0 42 36.88711245097793 39.0 35.0 41.0 32.0 41.0 43 36.80520080057698 39.0 35.0 41.0 31.0 41.0 44 36.66807028204557 39.0 35.0 41.0 31.0 41.0 45 36.634740439314406 39.0 35.0 41.0 31.0 41.0 46 36.547645982144836 39.0 35.0 41.0 31.0 41.0 47 36.45499409301619 39.0 35.0 40.0 31.0 41.0 48 36.37151462144419 38.0 35.0 40.0 31.0 41.0 49 36.27612678850343 38.0 35.0 40.0 31.0 41.0 50 36.160631612171485 38.0 35.0 40.0 30.0 41.0 51 34.921520447308374 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 14.0 9 20.0 10 12.0 11 15.0 12 10.0 13 13.0 14 19.0 15 19.0 16 45.0 17 70.0 18 154.0 19 258.0 20 523.0 21 853.0 22 1220.0 23 1855.0 24 2580.0 25 3442.0 26 4654.0 27 5645.0 28 6573.0 29 8097.0 30 10354.0 31 13280.0 32 17681.0 33 25612.0 34 44677.0 35 56164.0 36 53415.0 37 81761.0 38 136732.0 39 202143.0 40 99.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.5211065897161 19.541275879004914 23.464663552656226 12.472953978622765 2 30.706286476178114 25.96831024865378 25.2457555998354 18.0796476753327 3 32.16201507055195 25.0675873990245 25.230711596124543 17.539685934299 4 29.20822818508844 24.981453103268237 26.464762371111973 19.34555634053135 5 24.295476032099774 33.5146479924367 23.130450685903327 19.0594252895602 6 25.57023411124598 35.21344048990356 24.19827996890906 15.0180454299414 7 79.46080520817509 5.72453839244496 9.985973678893115 4.828682720486835 8 79.79398564330077 6.067010712215583 8.43806368923218 5.700939955251464 9 73.72579500922552 7.204602875174591 10.653956941701535 8.415645173898358 10 40.9732290479063 25.299589534683065 17.37729918836125 16.34988222904938 11 30.656139797141936 24.17025682474178 24.684555265327553 20.48904811278873 12 28.15868769090767 21.04538126962542 29.88609329347164 20.909837745995272 13 25.45991141736639 22.655532137384203 31.824557418684947 20.059999026564466 14 21.558647278583976 26.859446233173205 29.481675076068086 22.10023141217473 15 19.17092790529947 24.666266476502592 35.54868578828367 20.614119829914266 16 22.3946219161636 23.244460635594407 31.698158289467283 22.66275915877471 17 22.377955519895696 23.916573624911692 28.611040233860514 25.094430621332105 18 23.549765416785274 24.04002294948017 29.89346780509461 22.51674382863995 19 23.93677978675862 26.32818641585461 26.859741213638127 22.875292583748642 20 25.637784637712368 24.770984541548735 28.174469145780822 21.416761674958078 21 24.732194610411927 26.42405506695319 28.012819851005368 20.830930471629514 22 22.853464029344657 23.347408817851036 28.145856040683704 25.653271112120603 23 22.106426001938022 26.052527171388075 28.269600345717105 23.571446480956798 24 23.491506774963828 23.205818194690057 28.85144931276926 24.451225717576854 25 22.57308509743942 25.92966780774943 26.80133508158422 24.695912013226923 26 21.807463300742906 25.85312037710303 27.354570943539265 24.9848453786148 27 22.240937093940953 25.83365166641839 27.37374467375898 24.551666565881675 28 20.04451255215623 25.80548103201866 28.702336687752855 25.44766972807226 29 22.75435059313197 23.751827035254593 28.928881684810428 24.564940686803016 30 23.144462257986966 25.254457523550506 27.155311639486673 24.44576857897586 31 23.24239577233998 25.301801888169955 26.06270399742777 25.3930983420623 32 24.826145888488536 26.394409530228863 25.46330369271295 23.316140888569656 33 23.624985435339543 25.50755076245076 25.445457374585366 25.422006427624332 34 22.98591025809316 24.587801672834217 28.173289223921145 24.25299884515148 35 22.25509615625705 25.805923502716034 27.196756394807753 24.74222394621916 36 24.799450156413393 25.6619730358357 26.240282237308833 23.29829457044207 37 22.07265073870483 26.438214129269287 28.347622678688104 23.14151245333778 38 21.53283648790359 27.30294936217849 25.71949422649485 25.44471992342307 39 23.248885342568187 24.762725088531013 28.37549833262292 23.61289123627788 40 22.64270048716024 25.309176399792925 29.142005070714195 22.906118042332647 41 21.149509373741722 25.633654911203507 27.397343110952477 25.819492604102294 42 23.346228895991363 25.026732604633256 27.23421891385243 24.392819585522947 43 23.737667972938493 23.93265006024976 27.089236015344888 25.240445951466867 44 21.752744424500488 24.303440504652578 27.99217121846106 25.951643852385875 45 21.330627379201815 23.739880326425382 27.578461116412566 27.351031177960238 46 23.836191448221342 25.289855179340748 27.228171814321595 23.64578155811631 47 20.949365128294378 24.975111023272483 29.952611388310807 24.12291246012233 48 22.00318283921647 23.943416847219293 28.627559139895958 25.425841173668275 49 22.12515726146036 22.62588660065987 30.625314338557928 24.62364179932184 50 21.37502193917208 22.32869378225427 30.178271443973625 26.11801283460003 51 19.867966743902386 23.02632258178702 27.965917957083292 29.1397927172273 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 303.0 1 626.0 2 949.0 3 1753.0 4 2557.0 5 1777.5 6 998.0 7 999.5 8 1001.0 9 1081.0 10 1161.0 11 1105.5 12 1050.0 13 1092.5 14 1135.0 15 1114.5 16 1094.0 17 1178.0 18 1262.0 19 1223.0 20 1184.0 21 1164.0 22 1144.0 23 1606.5 24 2069.0 25 2647.5 26 3809.0 27 4392.0 28 4876.0 29 5360.0 30 6534.5 31 7709.0 32 8796.5 33 9884.0 34 11625.5 35 13367.0 36 15664.5 37 17962.0 38 19699.5 39 21437.0 40 23705.5 41 25974.0 42 29533.5 43 33093.0 44 38377.0 45 43661.0 46 55696.0 47 67731.0 48 69186.5 49 70642.0 50 70035.5 51 69429.0 52 62098.5 53 54768.0 54 48801.0 55 42834.0 56 40808.5 57 38783.0 58 35543.0 59 32303.0 60 30723.5 61 29144.0 62 26051.5 63 22959.0 64 20662.0 65 18365.0 66 14573.0 67 10781.0 68 8800.5 69 6820.0 70 5703.5 71 4587.0 72 3722.5 73 2858.0 74 2432.5 75 1516.0 76 1025.0 77 795.5 78 566.0 79 410.5 80 255.0 81 168.5 82 82.0 83 54.5 84 27.0 85 30.0 86 33.0 87 28.0 88 23.0 89 15.0 90 7.0 91 6.0 92 5.0 93 4.5 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 678011.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.65114598192466 #Duplication Level Percentage of deduplicated Percentage of total 1 71.19232897051039 21.821264680683182 2 11.741088066248846 7.197556086104538 3 4.5043303304300855 4.1418865952647055 4 2.2394742002520807 2.7456980253872203 5 1.2639700592670455 1.9371065401688088 6 0.8460195711281904 1.5558881626929275 7 0.5976181425653603 1.2822376650452265 8 0.47369892035125205 1.1615531807333066 9 0.39782764260564163 1.0974485834235426 >10 6.431700645835341 47.190816180498686 >50 0.2622063371333665 4.8122381826623215 >100 0.043459613888547154 2.2604035777749583 >500 0.00289730759256981 0.5110773673426487 >1k 0.0033801921913314452 2.284825172217917 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGC 3303 0.4871602378132508 No Hit GAATCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTC 3032 0.44719038481676554 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCG 2772 0.40884292437733305 No Hit GCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 2420 0.35692636255164 No Hit CCTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGC 1533 0.2261025263601918 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1214 0.17905314220565743 No Hit CTGTCTCTTATACACATCTGACGCGCCTATAGTCGTATGCCGTCTTCTGCT 1163 0.17153114035023032 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.9498046491871076E-4 0.0 0.0 0.18392031987681615 0.0 2 2.9498046491871076E-4 0.0 0.0 0.9629637277271312 0.0 3 2.9498046491871076E-4 0.0 0.0 1.2782978447252331 0.0 4 2.9498046491871076E-4 0.0 0.0 1.7959885606575705 0.0 5 2.9498046491871076E-4 0.0 0.0 3.367496987512002 0.0 6 2.9498046491871076E-4 0.0 0.0 4.255093206452402 0.0 7 2.9498046491871076E-4 0.0 0.0 5.125285577962599 0.0 8 2.9498046491871076E-4 0.0 0.0 6.518330823541211 0.0 9 2.9498046491871076E-4 0.0 0.0 6.992954391595417 0.0 10 2.9498046491871076E-4 0.0 0.0 8.453697653872872 0.0 11 2.9498046491871076E-4 0.0 0.0 9.89098996918929 0.0 12 2.9498046491871076E-4 0.0 0.0 11.61175851129259 0.0 13 2.9498046491871076E-4 0.0 0.0 12.146115623492834 0.0 14 2.9498046491871076E-4 0.0 0.0 12.364696147997599 0.0 15 2.9498046491871076E-4 0.0 0.0 12.787403154226112 0.0 16 2.9498046491871076E-4 0.0 0.0 13.555089814177055 0.0 17 2.9498046491871076E-4 0.0 0.0 14.486195651692967 0.0 18 2.9498046491871076E-4 0.0 0.0 15.466268246385383 0.0 19 2.9498046491871076E-4 0.0 0.0 16.13911868686496 0.0 20 2.9498046491871076E-4 0.0 0.0 16.75754523156704 0.0 21 2.9498046491871076E-4 0.0 0.0 17.479657409688045 0.0 22 2.9498046491871076E-4 0.0 0.0 18.270795016600026 0.0 23 4.4247069737806614E-4 0.0 0.0 19.00662378633975 0.0 24 4.4247069737806614E-4 0.0 0.0 19.58758781199715 0.0 25 4.4247069737806614E-4 0.0 0.0 20.09775652607406 0.0 26 4.4247069737806614E-4 0.0 0.0 20.61249743735721 0.0 27 4.4247069737806614E-4 0.0 0.0 21.100542616565217 0.0 28 4.4247069737806614E-4 0.0 0.0 21.59935458274276 0.0 29 4.4247069737806614E-4 0.0 0.0 22.128697027039383 0.0 30 4.4247069737806614E-4 0.0 0.0 22.712463367113514 0.0 31 4.4247069737806614E-4 0.0 0.0 23.245198086756705 0.0 32 5.899609298374215E-4 0.0 0.0 23.74518997479392 0.0 33 7.374511622967769E-4 0.0 0.0 24.276892262809895 0.0 34 7.374511622967769E-4 0.0 0.0 24.82688333965083 0.0 35 7.374511622967769E-4 0.0 0.0 25.41507438669874 0.0 36 8.849413947561323E-4 0.0 0.0 25.9457442430875 0.0 37 8.849413947561323E-4 0.0 0.0 26.466089783204108 0.0 38 0.0010324316272154876 0.0 0.0 26.977438419140693 0.0 39 0.0010324316272154876 0.0 0.0 27.52521714249474 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTCG 20 7.0312363E-4 45.000004 1 ATTACGG 25 3.8891063E-5 45.000004 2 TAGCACG 20 7.0312363E-4 45.000004 1 CCGAATC 20 7.0312363E-4 45.000004 13 GCGTAAG 25 3.8891063E-5 45.000004 1 CTAATCG 20 7.0312363E-4 45.000004 44 CGTATGG 55 1.8189894E-12 45.0 2 GTTAACG 30 2.164179E-6 44.999996 1 CCCCGAT 60 3.6379788E-12 41.249996 14 TGTTGCG 50 1.0804797E-9 40.500004 1 TGTACCG 50 1.0804797E-9 40.500004 1 CTCACGA 45 1.9263098E-8 40.0 24 AACCCGC 40 3.455425E-7 39.375004 21 CCCATTA 110 0.0 38.863636 33 CATACGA 105 0.0 38.57143 18 GTTAGCG 35 6.244498E-6 38.571426 1 ACGATAT 35 6.244498E-6 38.571426 23 TACGATA 35 6.244498E-6 38.571426 22 TAGGCCG 35 6.244498E-6 38.571426 1 CGATATA 35 6.244498E-6 38.571426 24 >>END_MODULE