##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935879.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 739274 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.775199722971454 33.0 31.0 34.0 30.0 34.0 2 31.816804053706743 33.0 31.0 34.0 30.0 34.0 3 31.84509261789269 33.0 31.0 34.0 30.0 34.0 4 35.56786522994181 37.0 35.0 37.0 33.0 37.0 5 33.479861323406475 37.0 35.0 37.0 31.0 37.0 6 34.4739501186299 37.0 35.0 37.0 30.0 37.0 7 35.61673479657069 37.0 35.0 37.0 32.0 37.0 8 35.66990452795581 37.0 35.0 37.0 33.0 37.0 9 37.53644386249212 39.0 37.0 39.0 35.0 39.0 10 36.83732012758463 39.0 37.0 39.0 32.0 39.0 11 36.95009428168717 39.0 37.0 39.0 33.0 39.0 12 37.047600754253494 39.0 37.0 39.0 33.0 39.0 13 37.09329558458704 39.0 37.0 39.0 33.0 39.0 14 38.152614592153924 40.0 37.0 41.0 33.0 41.0 15 38.25193365382795 40.0 37.0 41.0 34.0 41.0 16 38.222498018326085 40.0 37.0 41.0 34.0 41.0 17 38.2232839244989 40.0 37.0 41.0 34.0 41.0 18 38.18788432976136 40.0 37.0 41.0 34.0 41.0 19 38.091619616001644 40.0 37.0 41.0 34.0 41.0 20 38.148333364895834 40.0 37.0 41.0 34.0 41.0 21 38.05141801280716 40.0 37.0 41.0 34.0 41.0 22 38.14192978516761 40.0 37.0 41.0 34.0 41.0 23 38.14618666421381 40.0 37.0 41.0 34.0 41.0 24 38.10352589161799 40.0 37.0 41.0 34.0 41.0 25 37.899241688467335 40.0 37.0 41.0 33.0 41.0 26 37.99492745585534 40.0 37.0 41.0 34.0 41.0 27 37.97868990387867 40.0 37.0 41.0 34.0 41.0 28 37.835310047424905 40.0 37.0 41.0 33.0 41.0 29 37.83195946293255 40.0 37.0 41.0 33.0 41.0 30 37.70544209589408 40.0 36.0 41.0 33.0 41.0 31 37.66473188560669 40.0 36.0 41.0 33.0 41.0 32 37.655804207912084 40.0 37.0 41.0 33.0 41.0 33 37.55690582923246 40.0 37.0 41.0 33.0 41.0 34 37.493105397998576 40.0 37.0 41.0 33.0 41.0 35 37.45342187064607 40.0 37.0 41.0 33.0 41.0 36 37.35031801470091 40.0 36.0 41.0 32.0 41.0 37 37.31328303173113 40.0 36.0 41.0 32.0 41.0 38 37.21009530972278 40.0 36.0 41.0 32.0 41.0 39 37.17741459864678 40.0 36.0 41.0 32.0 41.0 40 37.15084934679158 40.0 36.0 41.0 32.0 41.0 41 37.028546925767714 39.0 36.0 41.0 31.0 41.0 42 37.04397016532436 39.0 36.0 41.0 31.0 41.0 43 36.98154811341938 39.0 36.0 41.0 31.0 41.0 44 36.86762418264405 39.0 35.0 41.0 31.0 41.0 45 36.8477966220914 39.0 35.0 41.0 31.0 41.0 46 36.736653798185785 39.0 35.0 41.0 31.0 41.0 47 36.69628987357867 39.0 35.0 41.0 31.0 41.0 48 36.605878199422676 39.0 35.0 41.0 31.0 41.0 49 36.4953224379594 39.0 35.0 41.0 30.0 41.0 50 36.39235790789342 39.0 35.0 41.0 30.0 41.0 51 35.142622356528165 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 9.0 10 10.0 11 6.0 12 8.0 13 8.0 14 13.0 15 20.0 16 33.0 17 75.0 18 123.0 19 264.0 20 498.0 21 796.0 22 1264.0 23 1948.0 24 2867.0 25 4361.0 26 5710.0 27 6748.0 28 7595.0 29 8995.0 30 11071.0 31 14242.0 32 18928.0 33 25678.0 34 40786.0 35 53682.0 36 58410.0 37 89254.0 38 157460.0 39 228324.0 40 87.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.18097755365399 20.923230087897046 24.681647129481085 12.21414522896788 2 31.21521925564811 25.385039917540723 26.049340298725504 17.350400528085665 3 30.626263063492022 24.723174357545375 27.969061538752882 16.68150104020972 4 27.227387950881543 25.67153721083117 28.428972207868803 18.67210263041849 5 23.39322091673723 33.43307082353768 24.63687347316421 18.536834786560867 6 23.09630799946975 35.98814512616432 26.047581816755354 14.867965057610574 7 79.71509886726707 5.382713310626372 10.368686035218335 4.533501786888217 8 80.7642362642268 4.858956219209657 8.66214691711057 5.714660599452976 9 74.82083774081057 6.746618980242778 11.566888596109155 6.865654682837487 10 35.49685231727343 26.91207860684942 21.281013534900456 16.310055540976688 11 26.022016194266268 26.493018826578506 27.115791979699 20.36917299945622 12 22.400896014197713 21.97331435976377 33.090166839358616 22.535622786679905 13 22.680765183139133 25.16090110026864 34.61896401063746 17.539369705954762 14 20.19711230206933 28.85073734501687 31.15840676122791 19.793743591685896 15 18.427944172255483 27.51145042298255 35.811891125617834 18.24871427914413 16 20.569504676209363 26.63004515240628 31.196687561039617 21.60376261034474 17 20.79837786801646 26.807110760015906 29.073252948162658 23.321258423804977 18 22.019034890987648 25.36474974096208 32.166016930123334 20.45019843792694 19 21.547761722987687 28.58344808555421 28.673942273094955 21.194847918363152 20 21.219737201632956 27.507121851979104 30.22789926333132 21.04524168305662 21 20.71356492991773 29.26262792956333 30.735559481328977 19.28824765918996 22 19.246585163281814 25.970343877912654 29.718615831207373 25.064455127598155 23 17.8843027077917 28.039130281871135 29.729707794403698 24.34685921593347 24 19.714882438716906 26.20219296228462 30.613547886169407 23.469376712829074 25 18.733243695842138 28.91187841044051 28.748069051528937 23.606808842188418 26 18.287941953862845 28.068212868300524 30.405370674472522 23.238474503364113 27 21.333632726161074 26.71215273362786 28.665420398931925 23.288794141279144 28 18.65817004250116 26.495453647767945 31.816349553751383 23.030026755979517 29 19.26389944729559 24.4725230428772 29.655716283813575 26.60786122601363 30 21.883631779286166 25.582936773104425 28.392044086495673 24.141387361113743 31 19.949572147809878 26.373712588296083 29.033484202068514 24.64323106182552 32 19.604098074597513 27.43407721629599 26.985393778220253 25.976430930886245 33 19.916972597440193 26.19583537362331 27.512262030045694 26.374929998890806 34 18.21638526446216 25.256535465875977 30.455284508855986 26.071794760805872 35 18.80128342130252 26.371548302794363 27.49941158487922 27.327756691023897 36 20.326293092953357 27.119308943639297 28.43654720712483 24.117850756282515 37 18.567134783584976 26.8096808490492 31.570973684993657 23.052210682372166 38 17.732802722671163 28.394208371997394 28.201857498031853 25.671131407299598 39 19.19897088224393 26.066789850583138 29.158742225480673 25.575497041692252 40 19.919272150785773 25.407088576089514 29.657339497939873 25.01629977518484 41 18.063262065215334 27.218595541030794 28.501069968644916 26.217072425108956 42 20.056163208769682 27.09590760665193 29.695079226376148 23.15284995820224 43 20.69598011021624 25.93706798832368 29.571850220621855 23.795101680838226 44 19.401466844498792 25.23556895007805 28.893617251519732 26.469346953903422 45 19.43798916234035 23.72787356244099 28.17696821476205 28.65716906045661 46 21.715223313683424 25.50826892329502 28.385957033522075 24.390550729499484 47 18.613125850496566 24.877785503074637 31.49671163871582 25.01237700771297 48 18.87243430717163 25.09610780306084 29.637049321361225 26.394408568406302 49 19.95349491528175 23.023263363786633 32.004912928088906 25.01832879284271 50 19.31787131699478 22.53656966158691 31.104705427216434 27.04085359420188 51 18.994986973706638 22.78559776212879 28.196717319965263 30.02269794419931 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 143.0 1 319.5 2 496.0 3 2140.0 4 3784.0 5 2643.0 6 1502.0 7 1496.0 8 1490.0 9 1494.0 10 1498.0 11 1514.0 12 1530.0 13 1539.0 14 1548.0 15 1476.5 16 1405.0 17 1472.0 18 1539.0 19 1593.0 20 1647.0 21 1832.5 22 2018.0 23 2427.5 24 2837.0 25 3259.5 26 4778.5 27 5875.0 28 6814.5 29 7754.0 30 9167.5 31 10581.0 32 12891.0 33 15201.0 34 17540.0 35 19879.0 36 21975.0 37 24071.0 38 25976.5 39 27882.0 40 32323.5 41 36765.0 42 40595.5 43 44426.0 44 51051.0 45 57676.0 46 72017.0 47 86358.0 48 90842.5 49 95327.0 50 92962.5 51 90598.0 52 77035.0 53 63472.0 54 53608.5 55 43745.0 56 36686.0 57 29627.0 58 25045.5 59 20464.0 60 17243.0 61 14022.0 62 11335.5 63 8649.0 64 7002.0 65 5355.0 66 4031.5 67 2708.0 68 2147.5 69 1587.0 70 1247.0 71 907.0 72 703.0 73 499.0 74 374.0 75 250.5 76 252.0 77 190.0 78 128.0 79 83.5 80 39.0 81 38.5 82 38.0 83 20.0 84 2.0 85 6.5 86 11.0 87 7.0 88 3.0 89 1.5 90 0.0 91 1.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 739274.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.40060969006363 #Duplication Level Percentage of deduplicated Percentage of total 1 72.45390869760571 28.54728177113869 2 11.932553057854216 9.402997312769784 3 4.603410948060609 5.441315940225054 4 2.2561478937366983 3.5557441025671523 5 1.3590898374343998 2.677448410924241 6 0.9661555680016751 2.284027106082944 7 0.7358313588336811 2.0294542916980514 8 0.5616707269852417 1.770413527062384 9 0.48243087455487066 1.7107263531695258 >10 4.528834719736511 35.072557566989424 >50 0.07778796310820815 2.0246002441673743 >100 0.037683939308386497 2.687025381191188 >500 0.0017286210691919474 0.5072737767188319 >1k 0.002765793710707116 2.2891342152953733 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 3123 0.42244147636735496 No Hit GAATCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTC 2874 0.38875978324680704 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGC 2261 0.30584059496208443 No Hit CCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 2090 0.282709793662431 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCG 1969 0.2663423845556586 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1947 0.263366491990791 No Hit CTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGCT 1524 0.20614819403901669 No Hit TCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTGC 1017 0.13756739720320207 No Hit CGCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCTG 866 0.11714195278070107 No Hit GAACTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTTCT 779 0.1053736503650879 No Hit GAATGCTGTCTCTTATACACATCTGACGCCGTCCTAATCGTATGCCGTCTT 760 0.10280356133179308 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.058035315728674E-4 0.0 0.0 0.2208923890194975 0.0 2 4.058035315728674E-4 0.0 0.0 1.2156521127484532 0.0 3 5.410713754304899E-4 0.0 0.0 1.6996404580710265 0.0 4 5.410713754304899E-4 0.0 0.0 2.4338743145302013 0.0 5 5.410713754304899E-4 0.0 0.0 4.364822785597762 0.0 6 5.410713754304899E-4 0.0 0.0 5.78445880688351 0.0 7 6.763392192881124E-4 0.0 0.0 6.982120296398899 0.0 8 6.763392192881124E-4 0.0 0.0 9.089863839388373 0.0 9 6.763392192881124E-4 0.0 0.0 9.863054834878543 0.0 10 6.763392192881124E-4 0.0 0.0 11.800901965982842 0.0 11 6.763392192881124E-4 0.0 0.0 13.869553102097463 0.0 12 6.763392192881124E-4 0.0 0.0 15.921566293417596 0.0 13 6.763392192881124E-4 0.0 0.0 16.73560817775277 0.0 14 6.763392192881124E-4 0.0 0.0 17.079323768994985 0.0 15 6.763392192881124E-4 0.0 0.0 17.589824611713656 0.0 16 8.116070631457348E-4 0.0 0.0 18.6216477246596 0.0 17 8.116070631457348E-4 0.0 0.0 19.979736876990128 0.0 18 8.116070631457348E-4 0.0 0.0 21.467818427267833 0.0 19 8.116070631457348E-4 0.0 0.0 22.384393337247083 0.0 20 8.116070631457348E-4 0.0 0.0 23.24943119871658 0.0 21 0.0010821427508609799 0.0 0.0 24.287882436011547 0.0 22 0.0010821427508609799 0.0 0.0 25.337696172190554 0.0 23 0.0010821427508609799 0.0 0.0 26.514796949439585 0.0 24 0.0010821427508609799 0.0 0.0 27.338983922064077 0.0 25 0.0012174105947186022 0.0 0.0 28.122184737999714 0.0 26 0.0012174105947186022 0.0 0.0 28.85236055914316 0.0 27 0.0012174105947186022 0.0 0.0 29.578478344970875 0.0 28 0.0012174105947186022 0.0 0.0 30.353968893806627 0.0 29 0.0012174105947186022 0.0 0.0 31.123913461044214 0.0 30 0.0012174105947186022 0.0 0.0 31.960004003928177 0.0 31 0.0012174105947186022 0.0 0.0 32.76308919291088 0.0 32 0.0013526784385762248 0.0 0.0 33.50341010234365 0.0 33 0.0013526784385762248 0.0 0.0 34.28038859746184 0.0 34 0.0014879462824338473 0.0 0.0 35.050874236074854 0.0 35 0.0014879462824338473 0.0 0.0 35.77104023677283 0.0 36 0.0014879462824338473 0.0 0.0 36.48511918449722 0.0 37 0.0014879462824338473 0.0 0.0 37.18918831177615 0.0 38 0.0014879462824338473 0.0 0.0 37.87851324407459 0.0 39 0.0014879462824338473 0.0 0.0 38.62465067079324 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCCACG 20 7.031651E-4 45.000004 31 CGTATCA 20 7.031651E-4 45.000004 11 ACCGCTT 20 7.031651E-4 45.000004 16 CGCCTAA 20 7.031651E-4 45.000004 37 TCGGAGC 20 7.031651E-4 45.000004 40 TAGACCG 25 3.8894505E-5 45.0 1 AAGCGTA 25 3.8894505E-5 45.0 29 ACTACGG 25 3.8894505E-5 45.0 2 CGTACAA 25 3.8894505E-5 45.0 32 ACGGTGC 25 3.8894505E-5 45.0 27 TAGCGCG 30 2.1644464E-6 44.999996 1 TTCCGCG 30 2.1644464E-6 44.999996 1 TCGAGCG 30 2.1644464E-6 44.999996 1 GTCGAAG 65 0.0 41.538464 1 CGTTTTT 1550 0.0 41.225807 1 ATTTACG 45 1.9266736E-8 40.0 1 ATTACCG 45 1.9266736E-8 40.0 1 GCGGCTA 45 1.9266736E-8 40.0 24 CCGCGAA 45 1.9266736E-8 40.0 26 TATCCGG 45 1.9266736E-8 40.0 2 >>END_MODULE