##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935876.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 915408 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.059431422928355 33.0 31.0 34.0 30.0 34.0 2 32.116047707688814 33.0 31.0 34.0 30.0 34.0 3 32.11550368797301 33.0 31.0 34.0 30.0 34.0 4 35.81687837554402 37.0 35.0 37.0 35.0 37.0 5 33.65421211088389 37.0 35.0 37.0 32.0 37.0 6 34.67181409819447 37.0 35.0 37.0 31.0 37.0 7 35.79579706535228 37.0 35.0 37.0 33.0 37.0 8 35.8491437697726 37.0 35.0 37.0 35.0 37.0 9 37.77503801583556 39.0 38.0 39.0 35.0 39.0 10 37.29791415412581 39.0 37.0 39.0 34.0 39.0 11 37.26398065125059 39.0 37.0 39.0 34.0 39.0 12 37.31989997902575 39.0 37.0 39.0 34.0 39.0 13 37.332211429220635 39.0 37.0 39.0 34.0 39.0 14 38.455214505444566 40.0 38.0 41.0 34.0 41.0 15 38.554669611801515 40.0 38.0 41.0 34.0 41.0 16 38.55301570447276 40.0 38.0 41.0 34.0 41.0 17 38.51940446227256 40.0 38.0 41.0 34.0 41.0 18 38.46442460629577 40.0 38.0 41.0 34.0 41.0 19 38.35121279254715 40.0 37.0 41.0 34.0 41.0 20 38.35729204900984 40.0 37.0 41.0 34.0 41.0 21 38.28066610735323 40.0 37.0 41.0 34.0 41.0 22 38.356977435198296 40.0 37.0 41.0 34.0 41.0 23 38.347803383846326 40.0 37.0 41.0 34.0 41.0 24 38.29525304563648 40.0 37.0 41.0 34.0 41.0 25 38.13484806774684 40.0 37.0 41.0 34.0 41.0 26 38.19152661982417 40.0 37.0 41.0 34.0 41.0 27 38.18942482477758 40.0 37.0 41.0 34.0 41.0 28 38.11177529582437 40.0 37.0 41.0 34.0 41.0 29 38.13055162288291 40.0 37.0 41.0 34.0 41.0 30 37.99063805428836 40.0 37.0 41.0 34.0 41.0 31 37.92599037806093 40.0 37.0 41.0 34.0 41.0 32 37.80899336689214 40.0 37.0 41.0 33.0 41.0 33 37.70516206980931 40.0 37.0 41.0 33.0 41.0 34 37.546726705469034 40.0 37.0 41.0 33.0 41.0 35 37.45398554524321 40.0 37.0 41.0 33.0 41.0 36 37.35844781780364 40.0 36.0 41.0 33.0 41.0 37 37.333126868019505 40.0 36.0 41.0 33.0 41.0 38 37.20822409242655 40.0 36.0 41.0 32.0 41.0 39 37.17506292276231 40.0 36.0 41.0 32.0 41.0 40 37.0698267876182 40.0 36.0 41.0 32.0 41.0 41 36.978336435775084 40.0 36.0 41.0 31.0 41.0 42 36.99308614300946 40.0 36.0 41.0 31.0 41.0 43 36.952771878768814 40.0 35.0 41.0 31.0 41.0 44 36.84496312026987 40.0 35.0 41.0 31.0 41.0 45 36.76950059427053 39.0 35.0 41.0 31.0 41.0 46 36.674640160453045 39.0 35.0 41.0 31.0 41.0 47 36.60146513904183 39.0 35.0 41.0 31.0 41.0 48 36.51592950902767 39.0 35.0 41.0 31.0 41.0 49 36.441780058727915 39.0 35.0 41.0 30.0 41.0 50 36.345673186163985 39.0 35.0 41.0 30.0 41.0 51 35.186616241064094 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 10.0 9 24.0 10 14.0 11 11.0 12 13.0 13 18.0 14 19.0 15 38.0 16 42.0 17 81.0 18 193.0 19 362.0 20 706.0 21 1215.0 22 1847.0 23 2580.0 24 3664.0 25 5724.0 26 7883.0 27 9028.0 28 9572.0 29 10299.0 30 11896.0 31 15190.0 32 19737.0 33 28287.0 34 47551.0 35 60623.0 36 65625.0 37 102920.0 38 185321.0 39 324714.0 40 200.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.24344991522906 19.232517085277824 23.405301242724555 14.118731756768565 2 32.973493786377226 24.9064897837904 25.345092024539877 16.774924405292506 3 31.128961075280092 25.275396326009826 27.457483439078533 16.138159159631552 4 27.266639574921786 25.35022634715886 28.904051526750912 18.479082551168442 5 24.303807701046964 33.336829042350516 24.67107562966459 17.688287626937935 6 24.71925086955762 35.09396902801811 25.391300928110745 14.795479174313531 7 80.7548109695349 4.8360949434569065 10.586863999440686 3.822230087567511 8 82.48496845122611 5.365367136839529 8.304275252128013 3.845389159806338 9 76.60103472986908 6.724542499082377 10.104019191442504 6.570403579606034 10 34.567209375491586 34.86008424658731 16.832603604075995 13.740102773845106 11 25.750157306905773 26.00414241518536 30.03524111652946 18.210459161379408 12 23.696755982032055 23.85187806966948 31.61803261496513 20.833333333333336 13 23.553431912327618 24.35263838638072 33.90215073497282 18.191778966318843 14 20.222676664394456 27.77231573243843 31.105365039414117 20.899642563752995 15 18.497653505322216 26.719342631919318 34.94900634471186 19.833997518046598 16 22.235658853757013 27.215514830545505 30.759071364899587 19.789754950797896 17 22.4428888539318 26.030906437348158 30.275898834181042 21.250305874539002 18 23.155467288902873 24.910094733714367 31.246395050076032 20.688042927306732 19 22.116804747172843 27.43028245328859 28.989150193137924 21.463762606400643 20 23.340630625906698 27.216388757799802 30.223681680736895 19.2192989355566 21 22.263296803174104 28.748492475486344 30.097508433398 18.89070228794155 22 22.288094489014735 24.531574991697692 30.480397811686156 22.69993270760142 23 20.29510338559418 27.850095258070716 30.80386013668222 21.050941219652877 24 20.241575341268593 26.665159142153005 30.9026139164176 22.190651600160802 25 20.502224144862183 29.36941778966319 29.294041563980215 20.834316501494417 26 20.91176830440634 27.094148183105236 30.062332861412617 21.931750651075806 27 21.04580689703389 27.163079195287782 30.235698180483457 21.55541572719487 28 18.557736004055023 27.770895600650203 31.727273521752046 21.944094873542728 29 20.430125146382817 25.691385699054408 31.23295841854124 22.64553073602153 30 21.6294810619964 25.965580375089576 31.658451750476292 20.746486812437734 31 22.490627130197684 26.997360739692027 28.83828850086519 21.6737236292451 32 22.003631167741595 27.517019733277404 28.949386503067487 21.529962595913517 33 22.43360337685491 26.04456155069652 28.39356876933564 23.12826630311293 34 21.585347735654484 27.33087322811249 29.36144320346774 21.72233583276528 35 20.469561113732894 27.08486270602835 29.755802876968524 22.689773303270236 36 21.954909723314632 28.318192543652664 28.23309387726566 21.493803855767048 37 21.10436002307168 27.41968608533026 29.214623424746122 22.261330466851938 38 20.951422753569993 29.135205285512033 27.56290091412791 22.350471046790066 39 22.70703336654257 25.48710520336287 27.757349728208624 24.048511701885936 40 23.763174453358502 25.924615035044486 28.96478947092444 21.34742104067257 41 20.751948857777077 26.76183734465943 28.463155226958907 24.023058570604583 42 21.268658346879203 26.733325467988045 29.45735671962666 22.540659465506092 43 21.415041161973676 25.644412109136034 29.5455141314037 23.395032597486583 44 21.8808443885131 26.29559715449286 29.100794399874154 22.722764057119885 45 21.420503207313025 25.242624053973746 28.560161152185692 24.776711586527536 46 22.9689930610176 26.284017618373447 28.14329785188681 22.603691468722143 47 20.62632181497212 26.451374687571004 30.656166430706307 22.266137066750563 48 21.055201615017566 26.47300438711482 29.19605247059235 23.27574152727527 49 21.51357645989548 25.249833953821682 30.07926520196459 23.157324384318247 50 20.94650691276458 25.559422683655814 30.217236467236468 23.276833936343138 51 20.763091430269345 24.51497037386608 28.6954013947879 26.026536801076677 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 189.0 1 550.0 2 911.0 3 4682.0 4 8453.0 5 5794.5 6 3136.0 7 3032.0 8 2928.0 9 2926.5 10 2925.0 11 2936.5 12 2948.0 13 2908.5 14 2869.0 15 2765.0 16 2661.0 17 2695.0 18 2729.0 19 2645.0 20 2561.0 21 2834.5 22 3108.0 23 3772.5 24 4437.0 25 5244.5 26 6991.5 27 7931.0 28 10418.5 29 12906.0 30 14783.5 31 16661.0 32 19208.0 33 21755.0 34 25289.5 35 28824.0 36 31447.5 37 34071.0 38 36813.0 39 39555.0 40 43210.5 41 46866.0 42 51212.0 43 55558.0 44 60392.5 45 65227.0 46 78866.0 47 92505.0 48 91617.5 49 90730.0 50 88101.5 51 85473.0 52 77231.0 53 68989.0 54 60529.5 55 52070.0 56 46445.0 57 40820.0 58 36323.5 59 31827.0 60 28204.5 61 24582.0 62 21164.5 63 17747.0 64 15147.0 65 12547.0 66 10379.0 67 8211.0 68 6811.5 69 5412.0 70 4169.0 71 2926.0 72 2723.5 73 2521.0 74 2131.5 75 1435.0 76 1128.0 77 849.5 78 571.0 79 344.5 80 118.0 81 133.5 82 149.0 83 96.5 84 44.0 85 27.0 86 10.0 87 8.0 88 6.0 89 4.0 90 2.0 91 2.0 92 2.0 93 8.0 94 14.0 95 7.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 915408.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.488222015814138 #Duplication Level Percentage of deduplicated Percentage of total 1 72.23945538798327 22.746920095583185 2 9.939686229161298 6.259660935027228 3 3.6915988013249184 3.487256479482971 4 1.9833205536520324 2.498049516876905 5 1.3170268008915769 2.0735416153625708 6 0.9634224858207002 1.8201876677129853 7 0.7990634986759837 1.7612762195729808 8 0.6939742144832386 1.748161131111875 9 0.619705746988755 1.7562088931092075 >10 7.6140380455512995 49.49222685240434 >50 0.1050820106924892 2.077293140362741 >100 0.02872240032823698 1.5211858115677428 >500 0.003152458572610221 0.7503354898559318 >1k 0.0017513658736723447 2.007696151969356 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4600 0.5025081712198277 No Hit GAATCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTC 4117 0.44974481324174576 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGC 4110 0.44898012689423733 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCG 3594 0.3926118189921871 No Hit GCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGC 1782 0.19466729589428974 TruSeq Adapter, Index 21 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGC 996 0.10880394315977138 TruSeq Adapter, Index 21 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTG 980 0.10705608865118069 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.554454407215143E-4 0.0 0.0 0.08586335273451838 0.0 2 6.554454407215143E-4 0.0 0.0 0.4869959624560852 0.0 3 6.554454407215143E-4 0.0 0.0 0.7458969115410833 0.0 4 6.554454407215143E-4 0.0 0.0 1.1117447083704752 0.0 5 6.554454407215143E-4 0.0 0.0 2.3082603604075995 0.0 6 6.554454407215143E-4 0.0 0.0 3.1696249104224563 0.0 7 6.554454407215143E-4 0.0 0.0 3.9268828762693793 0.0 8 6.554454407215143E-4 0.0 0.0 5.171355286385961 0.0 9 6.554454407215143E-4 0.0 0.0 5.727391501931379 0.0 10 7.646863475084334E-4 0.0 0.0 7.079466205233077 0.0 11 7.646863475084334E-4 0.0 0.0 8.059247898204953 0.0 12 7.646863475084334E-4 0.0 0.0 9.397121283624351 0.0 13 8.739272542953525E-4 0.0 0.0 9.81453078845717 0.0 14 8.739272542953525E-4 0.0 0.0 10.019357488682642 0.0 15 8.739272542953525E-4 0.0 0.0 10.321627077762047 0.0 16 8.739272542953525E-4 0.0 0.0 10.789287399716848 0.0 17 8.739272542953525E-4 0.0 0.0 11.41392690472445 0.0 18 8.739272542953525E-4 0.0 0.0 12.081498086099312 0.0 19 8.739272542953525E-4 0.0 0.0 12.554729694300246 0.0 20 9.831681610822714E-4 0.0 0.0 12.99999563036373 0.0 21 9.831681610822714E-4 0.0 0.0 13.493983010854176 0.0 22 9.831681610822714E-4 0.0 0.0 14.044775662873823 0.0 23 9.831681610822714E-4 0.0 0.0 14.580820792477235 0.0 24 9.831681610822714E-4 0.0 0.0 14.984684424868474 0.0 25 9.831681610822714E-4 0.0 0.0 15.36069162602905 0.0 26 0.0010924090678691907 0.0 0.0 15.722060545680177 0.0 27 0.0010924090678691907 0.0 0.0 16.134335727894012 0.0 28 0.0012016499746561097 0.0 0.0 16.52651058325905 0.0 29 0.0013108908814430287 0.0 0.0 16.949709856151575 0.0 30 0.0013108908814430287 0.0 0.0 17.46936884973695 0.0 31 0.0015293726950168667 0.0 0.0 17.913760858546134 0.0 32 0.0015293726950168667 0.0 0.0 18.359026794609616 0.0 33 0.0015293726950168667 0.0 0.0 18.77621781762886 0.0 34 0.0016386136018037858 0.0 0.0 19.192971877020955 0.0 35 0.0016386136018037858 0.0 0.0 19.651455962805656 0.0 36 0.0016386136018037858 0.0 0.0 20.077604740181428 0.0 37 0.0016386136018037858 0.0 0.0 20.49840071312464 0.0 38 0.0016386136018037858 0.0 0.0 20.962674566969046 0.0 39 0.0016386136018037858 0.0 0.0 21.495879432996 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCAAG 30 2.1650158E-6 45.000004 1 TAGTGCG 30 2.1650158E-6 45.000004 1 TAGTACG 30 2.1650158E-6 45.000004 1 CGACGGT 20 7.0325326E-4 45.0 28 AATGCGC 20 7.0325326E-4 45.0 17 CAATGCG 35 1.2115743E-7 45.0 1 TAGGCCG 20 7.0325326E-4 45.0 1 CGTTTTT 2520 0.0 42.053574 1 CGAATAT 110 0.0 40.909092 14 CGTTATT 225 0.0 40.0 1 ACGGGCG 165 0.0 39.545452 5 AGTAACG 40 3.4571895E-7 39.375 1 AATGCGG 110 0.0 38.863636 2 TATGCGG 105 0.0 38.57143 2 CGTAAGG 210 0.0 38.57143 2 CCGTAAG 30 1.1397403E-4 37.500004 1 TACGAAT 120 0.0 37.500004 12 TTACGGG 325 0.0 37.384617 3 AGTACGG 145 0.0 37.24138 2 TCGATGG 85 0.0 37.058823 2 >>END_MODULE